RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 CHRNA3P32297 505 aa23.39■■□□□ 1.33
IRF3-228ENST00000601291 DYNLT1P63172 113 aa23.39■■□□□ 1.33
IRF3-228ENST00000601291 COG7P83436 770 aa23.39■■□□□ 1.33
IRF3-228ENST00000601291 CYP1B1Q16678 543 aa23.39■■□□□ 1.33
IRF3-228ENST00000601291 NUGGCQ68CJ6 796 aa23.39■■□□□ 1.33
IRF3-228ENST00000601291 C8orf74Q6P047 294 aa23.39■■□□□ 1.33
IRF3-228ENST00000601291 HS6ST3Q8IZP7 471 aa23.39■■□□□ 1.33
IRF3-228ENST00000601291 ATP6V0D2Q8N8Y2 350 aa23.39■■□□□ 1.33
IRF3-228ENST00000601291 C12orf50Q8NA57 414 aaPredicted RBP23.39■■□□□ 1.33
IRF3-228ENST00000601291 LEMD2Q8NC56 503 aa23.39■■□□□ 1.33
IRF3-228ENST00000601291 RUNDC3BQ96NL0 473 aa23.39■■□□□ 1.33
IRF3-228ENST00000601291 CSPG4P5Q96PW8 444 aa23.39■■□□□ 1.33
IRF3-228ENST00000601291 SLITRK6Q9H5Y7 841 aa23.39■■□□□ 1.33
IRF3-228ENST00000601291 PRDM16Q9HAZ2 1276 aa23.39■■□□□ 1.33
IRF3-228ENST00000601291 TRPC7Q9HCX4 862 aa23.39■■□□□ 1.33
IRF3-228ENST00000601291 C2orf78A6NCI8 922 aa23.38■■□□□ 1.33
IRF3-228ENST00000601291 KCNU1A8MYU2 1149 aa23.38■■□□□ 1.33
IRF3-228ENST00000601291 I6L893 689 aaPredicted RBP23.38■■□□□ 1.33
IRF3-228ENST00000601291 APOL1O14791 398 aa23.38■■□□□ 1.33
IRF3-228ENST00000601291 PAGE1O75459 146 aa23.38■■□□□ 1.33
IRF3-228ENST00000601291 MOCS2O96007 188 aaPredicted RBP23.38■■□□□ 1.33
IRF3-228ENST00000601291 IGLV3-27P01718 113 aa23.38■■□□□ 1.33
IRF3-228ENST00000601291 ZFXP17010 805 aaPredicted RBP23.38■■□□□ 1.33
IRF3-228ENST00000601291 GOT1P17174 413 aa23.38■■□□□ 1.33
IRF3-228ENST00000601291 IL4RP24394 825 aa23.38■■□□□ 1.33
IRF3-228ENST00000601291 ADCY2Q08462 1091 aa23.38■■□□□ 1.33
IRF3-228ENST00000601291 UNC45BQ8IWX7 931 aa23.38■■□□□ 1.33
IRF3-228ENST00000601291 ZDHHC14Q8IZN3 488 aa23.38■■□□□ 1.33
IRF3-228ENST00000601291 MAGOHBQ96A72 148 aaKnown RBP23.38■■□□□ 1.33
IRF3-228ENST00000601291 DDX47Q9H0S4 455 aaKnown RBP23.38■■□□□ 1.33
IRF3-228ENST00000601291 ATXN3LQ9H3M9 355 aa23.38■■□□□ 1.33
IRF3-228ENST00000601291 CWC15Q9P013 229 aaKnown RBP23.38■■□□□ 1.33
IRF3-228ENST00000601291 OR12D3Q9UGF7 316 aa23.38■■□□□ 1.33
IRF3-228ENST00000601291 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.38■■□□□ 1.33
IRF3-228ENST00000601291 V9GYY5 206 aaPredicted RBP23.38■■□□□ 1.33
IRF3-228ENST00000601291 UQCRHLA0A096LP55 91 aa23.37■■□□□ 1.33
IRF3-228ENST00000601291 RFXAPO00287 272 aa23.37■■□□□ 1.33
IRF3-228ENST00000601291 DAPK3O43293 454 aa23.37■■□□□ 1.33
IRF3-228ENST00000601291 UQCRHP07919 91 aa23.37■■□□□ 1.33
IRF3-228ENST00000601291 HMBSP08397 361 aa23.37■■□□□ 1.33
IRF3-228ENST00000601291 TPI1P60174 286 aa23.37■■□□□ 1.33
IRF3-228ENST00000601291 SEMA3BQ13214 749 aa23.37■■□□□ 1.33
IRF3-228ENST00000601291 ACBD5Q5T8D3 534 aaPredicted RBP23.37■■□□□ 1.33
IRF3-228ENST00000601291 GAREM2Q75VX8 874 aa23.37■■□□□ 1.33
IRF3-228ENST00000601291 PDZD4Q76G19 769 aaPredicted RBP23.37■■□□□ 1.33
IRF3-228ENST00000601291 CCDC26Q8TAB7 109 aa23.37■■□□□ 1.33
IRF3-228ENST00000601291 PLD4Q96BZ4 506 aa23.37■■□□□ 1.33
IRF3-228ENST00000601291 BTN2A3PQ96KV6 586 aa23.37■■□□□ 1.33
IRF3-228ENST00000601291 FRMD8P1Q9BZ68 369 aaPredicted RBP23.37■■□□□ 1.33
IRF3-228ENST00000601291 MAGEB5Q9BZ81 275 aa23.37■■□□□ 1.33
IRF3-228ENST00000601291 LRRC19Q9H756 370 aa23.37■■□□□ 1.33
IRF3-228ENST00000601291 APOC4-APOC2K7ER74 178 aa23.36■■□□□ 1.33
IRF3-228ENST00000601291 APOC2P02655 101 aa23.36■■□□□ 1.33
IRF3-228ENST00000601291 TGM2P21980 687 aa23.36■■□□□ 1.33
IRF3-228ENST00000601291 HCAR3P49019 387 aa23.36■■□□□ 1.33
IRF3-228ENST00000601291 FNTAP49354 379 aa23.36■■□□□ 1.33
IRF3-228ENST00000601291 EPHA5P54756 1037 aa23.36■■□□□ 1.33
IRF3-228ENST00000601291 CCNG2Q16589 344 aa23.36■■□□□ 1.33
IRF3-228ENST00000601291 ERCC6LQ2NKX8 1250 aa23.36■■□□□ 1.33
IRF3-228ENST00000601291 GLE1Q53GS7 698 aaKnown RBP23.36■■□□□ 1.33
IRF3-228ENST00000601291 SLC9A4Q6AI14 798 aa23.36■■□□□ 1.33
IRF3-228ENST00000601291 RFX8Q6ZV50 586 aa23.36■■□□□ 1.33
IRF3-228ENST00000601291 PCDH19Q8TAB3 1148 aa23.36■■□□□ 1.33
IRF3-228ENST00000601291 C1orf54Q8WWF1 131 aa23.36■■□□□ 1.33
IRF3-228ENST00000601291 PRKD2Q9BZL6 878 aa23.36■■□□□ 1.33
IRF3-228ENST00000601291 DCLK3Q9C098 648 aa23.36■■□□□ 1.33
IRF3-228ENST00000601291 SIK2Q9H0K1 926 aa23.36■■□□□ 1.33
IRF3-228ENST00000601291 A0A1W2PPC1 479 aa23.35■■□□□ 1.33
IRF3-228ENST00000601291 A0A1W2PRU2 124 aa23.35■■□□□ 1.33
IRF3-228ENST00000601291 MBL2P11226 248 aaPredicted RBP23.35■■□□□ 1.33
IRF3-228ENST00000601291 PFKLP17858 780 aa23.35■■□□□ 1.33
IRF3-228ENST00000601291 HTR7P34969 479 aa23.35■■□□□ 1.33
IRF3-228ENST00000601291 CYP4F8P98187 520 aa23.35■■□□□ 1.33
IRF3-228ENST00000601291 PQLC3Q8N755 202 aa23.35■■□□□ 1.33
IRF3-228ENST00000601291 C1orf74Q96LT6 269 aa23.35■■□□□ 1.33
IRF3-228ENST00000601291 ZNF576Q9H609 170 aa23.35■■□□□ 1.33
IRF3-228ENST00000601291 NSUN3Q9H649 340 aaKnown RBP23.35■■□□□ 1.33
IRF3-228ENST00000601291 DZANK1Q9NVP4 752 aa23.35■■□□□ 1.33
IRF3-228ENST00000601291 HCFC1R1Q9NWW0 138 aa23.35■■□□□ 1.33
IRF3-228ENST00000601291 STIM2Q9P246 746 aa23.35■■□□□ 1.33
IRF3-228ENST00000601291 R3HDM2Q9Y2K5 976 aaKnown RBP23.35■■□□□ 1.33
IRF3-228ENST00000601291 CLUHO75153 1309 aa23.35■■□□□ 1.33
IRF3-228ENST00000601291 LAMA2P24043 3122 aaKnown RBP23.35■■□□□ 1.33
IRF3-228ENST00000601291 ATG2AQ2TAZ0 1938 aa23.35■■□□□ 1.33
IRF3-228ENST00000601291 CCDC195A0A1B0GUA6 201 aa23.35■■□□□ 1.33
IRF3-228ENST00000601291 FAM72CH0Y354 149 aa23.35■■□□□ 1.33
IRF3-228ENST00000601291 OLFM2O95897 454 aa23.35■■□□□ 1.33
IRF3-228ENST00000601291 HARS2P49590 506 aaKnown RBP23.35■■□□□ 1.33
IRF3-228ENST00000601291 ZNF697Q5TEC3 545 aa23.35■■□□□ 1.33
IRF3-228ENST00000601291 FAM72AQ5TYM5 149 aa23.35■■□□□ 1.33
IRF3-228ENST00000601291 TXNDC8Q6A555 127 aa23.35■■□□□ 1.33
IRF3-228ENST00000601291 FAM72DQ6L9T8 149 aa23.35■■□□□ 1.33
IRF3-228ENST00000601291 CCDC137Q6PK04 289 aaKnown RBP23.35■■□□□ 1.33
IRF3-228ENST00000601291 MAATS1Q7Z4T9 603 aa23.35■■□□□ 1.33
IRF3-228ENST00000601291 FAM72BQ86X60 149 aa23.35■■□□□ 1.33
IRF3-228ENST00000601291 ATG4AQ8WYN0 398 aa23.35■■□□□ 1.33
IRF3-228ENST00000601291 P3H4Q92791 437 aa23.35■■□□□ 1.33
IRF3-228ENST00000601291 HAUS1Q96CS2 278 aa23.35■■□□□ 1.33
IRF3-228ENST00000601291 RNF38Q9H0F5 515 aa23.35■■□□□ 1.33
IRF3-228ENST00000601291 SFXN1Q9H9B4 322 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms