RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 CADM4Q8NFZ8 388 aa18.81■□□□□ 0.6
CHMP2A-208ENST00000601220 UBA3Q8TBC4 463 aa18.81■□□□□ 0.6
CHMP2A-208ENST00000601220 DDI1Q8WTU0 396 aa18.81■□□□□ 0.6
CHMP2A-208ENST00000601220 UCMAQ8WVF2 138 aa18.81■□□□□ 0.6
CHMP2A-208ENST00000601220 KCTD13Q8WZ19 329 aa18.81■□□□□ 0.6
CHMP2A-208ENST00000601220 KLK13Q9UKR3 277 aa18.81■□□□□ 0.6
CHMP2A-208ENST00000601220 NEUROG3Q9Y4Z2 214 aa18.81■□□□□ 0.6
CHMP2A-208ENST00000601220 AKAP13Q12802 2813 aa18.81■□□□□ 0.6
CHMP2A-208ENST00000601220 O00370 1275 aa18.8■□□□□ 0.6
CHMP2A-208ENST00000601220 TIMM44O43615 452 aa18.8■□□□□ 0.6
CHMP2A-208ENST00000601220 CYBBP04839 570 aa18.8■□□□□ 0.6
CHMP2A-208ENST00000601220 HLA-FP30511 346 aa18.8■□□□□ 0.6
CHMP2A-208ENST00000601220 SLC8A3P57103 927 aa18.8■□□□□ 0.6
CHMP2A-208ENST00000601220 BST2Q10589 180 aaKnown RBP18.8■□□□□ 0.6
CHMP2A-208ENST00000601220 SLC14A1Q13336 389 aa18.8■□□□□ 0.6
CHMP2A-208ENST00000601220 PLEKHG6Q3KR16 790 aa18.8■□□□□ 0.6
CHMP2A-208ENST00000601220 DCAF17Q5H9S7 520 aaPredicted RBP18.8■□□□□ 0.6
CHMP2A-208ENST00000601220 TCERG1LQ5VWI1 586 aa18.8■□□□□ 0.6
CHMP2A-208ENST00000601220 KIAA0907Q7Z7F0 614 aaPredicted RBP18.8■□□□□ 0.6
CHMP2A-208ENST00000601220 TFAP2BQ92481 460 aa18.8■□□□□ 0.6
CHMP2A-208ENST00000601220 EDEM1Q92611 657 aa18.8■□□□□ 0.6
CHMP2A-208ENST00000601220 SIPA1Q96FS4 1042 aa18.8■□□□□ 0.6
CHMP2A-208ENST00000601220 CAMK1GQ96NX5 476 aa18.8■□□□□ 0.6
CHMP2A-208ENST00000601220 GSDMAQ96QA5 445 aa18.8■□□□□ 0.6
CHMP2A-208ENST00000601220 ZSWIM1Q9BR11 485 aa18.8■□□□□ 0.6
CHMP2A-208ENST00000601220 GPR174Q9BXC1 333 aa18.8■□□□□ 0.6
CHMP2A-208ENST00000601220 OLA1Q9NTK5 396 aaKnown RBP18.8■□□□□ 0.6
CHMP2A-208ENST00000601220 RMND1Q9NWS8 449 aa18.8■□□□□ 0.6
CHMP2A-208ENST00000601220 SUSD2Q9UGT4 822 aa18.8■□□□□ 0.6
CHMP2A-208ENST00000601220 SFMBT1Q9UHJ3 866 aa18.8■□□□□ 0.6
CHMP2A-208ENST00000601220 RALYQ9UKM9 306 aaKnown RBP18.8■□□□□ 0.6
CHMP2A-208ENST00000601220 MSRB2Q9Y3D2 182 aa18.8■□□□□ 0.6
CHMP2A-208ENST00000601220 HBS1LQ9Y450 684 aaKnown RBP18.8■□□□□ 0.6
CHMP2A-208ENST00000601220 IGF2RP11717 2491 aa18.8■□□□□ 0.6
CHMP2A-208ENST00000601220 ZZEF1O43149 2961 aa18.79■□□□□ 0.6
CHMP2A-208ENST00000601220 TRIM49BA6NDI0 452 aa18.79■□□□□ 0.6
CHMP2A-208ENST00000601220 METTL12A8MUP2 240 aa18.79■□□□□ 0.6
CHMP2A-208ENST00000601220 SH3BP5O60239 455 aa18.79■□□□□ 0.6
CHMP2A-208ENST00000601220 VDRP11473 427 aa18.79■□□□□ 0.6
CHMP2A-208ENST00000601220 BNC1Q01954 994 aa18.79■□□□□ 0.6
CHMP2A-208ENST00000601220 ADIGQ0VDE8 80 aa18.79■□□□□ 0.6
CHMP2A-208ENST00000601220 GRIK2Q13002 908 aa18.79■□□□□ 0.6
CHMP2A-208ENST00000601220 MPPE1Q53F39 396 aa18.79■□□□□ 0.6
CHMP2A-208ENST00000601220 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.79■□□□□ 0.6
CHMP2A-208ENST00000601220 C1orf216Q8TAB5 229 aa18.79■□□□□ 0.6
CHMP2A-208ENST00000601220 ERCC4Q92889 916 aaPredicted RBP18.79■□□□□ 0.6
CHMP2A-208ENST00000601220 TMEM245Q9H330 911 aa18.79■□□□□ 0.6
CHMP2A-208ENST00000601220 LRRC4Q9HBW1 653 aa18.79■□□□□ 0.6
CHMP2A-208ENST00000601220 KIAA1257Q9ULG3 409 aa18.79■□□□□ 0.6
CHMP2A-208ENST00000601220 CEP192Q8TEP8 1941 aa18.78■□□□□ 0.6
CHMP2A-208ENST00000601220 A0A1B0GTW7 788 aa18.78■□□□□ 0.6
CHMP2A-208ENST00000601220 TMEM8BA6NDV4 472 aa18.78■□□□□ 0.6
CHMP2A-208ENST00000601220 RNF225M0QZC1 329 aaPredicted RBP18.78■□□□□ 0.6
CHMP2A-208ENST00000601220 SYNCRIPO60506 623 aaKnown RBP18.78■□□□□ 0.6
CHMP2A-208ENST00000601220 TSPAN3O60637 253 aa18.78■□□□□ 0.6
CHMP2A-208ENST00000601220 GNSP15586 552 aa18.78■□□□□ 0.6
CHMP2A-208ENST00000601220 OXTRP30559 389 aa18.78■□□□□ 0.6
CHMP2A-208ENST00000601220 HARS2P49590 506 aaKnown RBP18.78■□□□□ 0.6
CHMP2A-208ENST00000601220 DAOAP59103 153 aa18.78■□□□□ 0.6
CHMP2A-208ENST00000601220 LRMPQ12912 555 aa18.78■□□□□ 0.6
CHMP2A-208ENST00000601220 CAMK2GQ13555 558 aaPredicted RBP18.78■□□□□ 0.6
CHMP2A-208ENST00000601220 PTPRNQ16849 979 aa18.78■□□□□ 0.6
CHMP2A-208ENST00000601220 LCLAT1Q6UWP7 414 aa18.78■□□□□ 0.6
CHMP2A-208ENST00000601220 ADIPOR2Q86V24 386 aa18.78■□□□□ 0.6
CHMP2A-208ENST00000601220 SLC35F5Q8WV83 523 aa18.78■□□□□ 0.6
CHMP2A-208ENST00000601220 PRCCQ92733 491 aaPredicted RBP18.78■□□□□ 0.6
CHMP2A-208ENST00000601220 TSG101Q99816 390 aa18.78■□□□□ 0.6
CHMP2A-208ENST00000601220 CIPCQ9C0C6 399 aa18.78■□□□□ 0.6
CHMP2A-208ENST00000601220 CNGB3Q9NQW8 809 aa18.78■□□□□ 0.6
CHMP2A-208ENST00000601220 HESX1Q9UBX0 185 aa18.78■□□□□ 0.6
CHMP2A-208ENST00000601220 ARMCX3Q9UH62 379 aaPredicted RBP18.78■□□□□ 0.6
CHMP2A-208ENST00000601220 ADAMTS9Q9P2N4 1935 aa18.78■□□□□ 0.6
CHMP2A-208ENST00000601220 PMM2O15305 246 aa18.77■□□□□ 0.6
CHMP2A-208ENST00000601220 MSI1O43347 362 aaKnown RBP18.77■□□□□ 0.6
CHMP2A-208ENST00000601220 LATS1O95835 1130 aa18.77■□□□□ 0.6
CHMP2A-208ENST00000601220 IGLV3-27P01718 113 aa18.77■□□□□ 0.6
CHMP2A-208ENST00000601220 CAPNS1P04632 268 aa18.77■□□□□ 0.6
CHMP2A-208ENST00000601220 EPHX1P07099 455 aa18.77■□□□□ 0.6
CHMP2A-208ENST00000601220 SETSIPP0DME0 302 aa18.77■□□□□ 0.6
CHMP2A-208ENST00000601220 HLA-EP13747 358 aa18.77■□□□□ 0.6
CHMP2A-208ENST00000601220 CD19P15391 556 aa18.77■□□□□ 0.6
CHMP2A-208ENST00000601220 SGSHP51688 502 aa18.77■□□□□ 0.6
CHMP2A-208ENST00000601220 LRRC63Q05C16 580 aa18.77■□□□□ 0.6
CHMP2A-208ENST00000601220 HNRNPDQ14103 355 aaKnown RBP18.77■□□□□ 0.6
CHMP2A-208ENST00000601220 E2F5Q15329 346 aa18.77■□□□□ 0.6
CHMP2A-208ENST00000601220 ADGRF1Q5T601 910 aa18.77■□□□□ 0.6
CHMP2A-208ENST00000601220 DCAF12L1Q5VU92 463 aa18.77■□□□□ 0.6
CHMP2A-208ENST00000601220 PMF1Q6P1K2 205 aa18.77■□□□□ 0.6
CHMP2A-208ENST00000601220 MSANTD2Q6P1R3 559 aa18.77■□□□□ 0.6
CHMP2A-208ENST00000601220 RAB44Q7Z6P3 723 aaPredicted RBP18.77■□□□□ 0.6
CHMP2A-208ENST00000601220 CHCHD4Q8N4Q1 142 aa18.77■□□□□ 0.6
CHMP2A-208ENST00000601220 LMO3Q8TAP4 145 aa18.77■□□□□ 0.6
CHMP2A-208ENST00000601220 TMA16Q96EY4 203 aaKnown RBP18.77■□□□□ 0.6
CHMP2A-208ENST00000601220 CCDC34Q96HJ3 373 aa18.77■□□□□ 0.6
CHMP2A-208ENST00000601220 IPO9Q96P70 1041 aaKnown RBP18.77■□□□□ 0.6
CHMP2A-208ENST00000601220 NUP58Q9BVL2 599 aa18.77■□□□□ 0.6
CHMP2A-208ENST00000601220 ZDHHC5Q9C0B5 715 aa18.77■□□□□ 0.6
CHMP2A-208ENST00000601220 ABCC13Q9NSE7 274 aa18.77■□□□□ 0.6
CHMP2A-208ENST00000601220 SPEGQ15772 3267 aa18.76■□□□□ 0.59
CHMP2A-208ENST00000601220 H0Y626 953 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms