RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 ANKS1BQ7Z6G8 1248 aa23.51■■□□□ 1.35
CCDC9-204ENST00000599398 TAC4Q86UU9 113 aa23.51■■□□□ 1.35
CCDC9-204ENST00000599398 IPO4Q8TEX9 1081 aaKnown RBP23.51■■□□□ 1.35
CCDC9-204ENST00000599398 PIWIL1Q96J94 861 aaKnown RBP23.51■■□□□ 1.35
CCDC9-204ENST00000599398 ACOX2Q99424 681 aa23.51■■□□□ 1.35
CCDC9-204ENST00000599398 NAA15Q9BXJ9 866 aaKnown RBP23.51■■□□□ 1.35
CCDC9-204ENST00000599398 CLEC4EQ9ULY5 219 aa23.51■■□□□ 1.35
CCDC9-204ENST00000599398 TLR6Q9Y2C9 796 aa23.51■■□□□ 1.35
CCDC9-204ENST00000599398 DMXL1Q9Y485 3027 aa23.51■■□□□ 1.35
CCDC9-204ENST00000599398 ABCA7Q8IZY2 2146 aa23.5■■□□□ 1.35
CCDC9-204ENST00000599398 GOLGA6L7A0A1B0GV03 622 aa23.5■■□□□ 1.35
CCDC9-204ENST00000599398 ACSL4O60488 711 aa23.5■■□□□ 1.35
CCDC9-204ENST00000599398 CYP11B1P15538 503 aa23.5■■□□□ 1.35
CCDC9-204ENST00000599398 HOXD9P28356 352 aaPredicted RBP23.5■■□□□ 1.35
CCDC9-204ENST00000599398 KLK7P49862 253 aa23.5■■□□□ 1.35
CCDC9-204ENST00000599398 COPB1P53618 953 aaKnown RBP23.5■■□□□ 1.35
CCDC9-204ENST00000599398 SNX16P57768 344 aa23.5■■□□□ 1.35
CCDC9-204ENST00000599398 TAF5Q15542 800 aa23.5■■□□□ 1.35
CCDC9-204ENST00000599398 TAF3Q5VWG9 929 aa23.5■■□□□ 1.35
CCDC9-204ENST00000599398 OR6B2Q6IFH4 312 aa23.5■■□□□ 1.35
CCDC9-204ENST00000599398 RFWD3Q6PCD5 774 aa23.5■■□□□ 1.35
CCDC9-204ENST00000599398 UCMAQ8WVF2 138 aa23.5■■□□□ 1.35
CCDC9-204ENST00000599398 ERLEC1Q96DZ1 483 aa23.5■■□□□ 1.35
CCDC9-204ENST00000599398 FCRL2Q96LA5 508 aaPredicted RBP23.5■■□□□ 1.35
CCDC9-204ENST00000599398 STK33Q9BYT3 514 aa23.5■■□□□ 1.35
CCDC9-204ENST00000599398 SLC2A11Q9BYW1 496 aa23.5■■□□□ 1.35
CCDC9-204ENST00000599398 FAM207AQ9NSI2 230 aaPredicted RBP23.5■■□□□ 1.35
CCDC9-204ENST00000599398 CACNA2D2Q9NY47 1150 aa23.5■■□□□ 1.35
CCDC9-204ENST00000599398 F8VZ95 297 aa23.49■■□□□ 1.35
CCDC9-204ENST00000599398 MOCS2O96007 188 aaPredicted RBP23.49■■□□□ 1.35
CCDC9-204ENST00000599398 NNTQ13423 1086 aa23.49■■□□□ 1.35
CCDC9-204ENST00000599398 ELF2Q15723 593 aa23.49■■□□□ 1.35
CCDC9-204ENST00000599398 DCAF6Q58WW2 860 aa23.49■■□□□ 1.35
CCDC9-204ENST00000599398 EFHC1Q5JVL4 640 aa23.49■■□□□ 1.35
CCDC9-204ENST00000599398 CAVIN1Q6NZI2 390 aaKnown RBP23.49■■□□□ 1.35
CCDC9-204ENST00000599398 FAM183BPQ6ZVS7 135 aa23.49■■□□□ 1.35
CCDC9-204ENST00000599398 AOPEPQ8N6M6 819 aa23.49■■□□□ 1.35
CCDC9-204ENST00000599398 PCMTD1Q96MG8 357 aaPredicted RBP23.49■■□□□ 1.35
CCDC9-204ENST00000599398 DDX50Q9BQ39 737 aaKnown RBP23.49■■□□□ 1.35
CCDC9-204ENST00000599398 NAT10Q9H0A0 1025 aaKnown RBP23.49■■□□□ 1.35
CCDC9-204ENST00000599398 GANQ9H2C0 597 aa23.49■■□□□ 1.35
CCDC9-204ENST00000599398 PARD6AQ9NPB6 346 aa23.49■■□□□ 1.35
CCDC9-204ENST00000599398 CEP250Q9BV73 2442 aa23.49■■□□□ 1.35
CCDC9-204ENST00000599398 ZBTB24O43167 697 aaPredicted RBP23.48■■□□□ 1.35
CCDC9-204ENST00000599398 GRAP2O75791 330 aa23.48■■□□□ 1.35
CCDC9-204ENST00000599398 TRUB2O95900 331 aaKnown RBP23.48■■□□□ 1.35
CCDC9-204ENST00000599398 ERBB2P04626 1255 aa23.48■■□□□ 1.35
CCDC9-204ENST00000599398 SLC6A4P31645 630 aa23.48■■□□□ 1.35
CCDC9-204ENST00000599398 SGSHP51688 502 aa23.48■■□□□ 1.35
CCDC9-204ENST00000599398 POLR2FP61218 127 aaKnown RBP23.48■■□□□ 1.35
CCDC9-204ENST00000599398 PLK5Q496M5 336 aa23.48■■□□□ 1.35
CCDC9-204ENST00000599398 PTPN20Q4JDL3 420 aa23.48■■□□□ 1.35
CCDC9-204ENST00000599398 FAM133BQ5BKY9 247 aaKnown RBP23.48■■□□□ 1.35
CCDC9-204ENST00000599398 TMEM35BQ8NCS4 154 aa23.48■■□□□ 1.35
CCDC9-204ENST00000599398 AZIN2Q96A70 460 aa23.48■■□□□ 1.35
CCDC9-204ENST00000599398 ZC3H10Q96K80 434 aaKnown RBP23.48■■□□□ 1.35
CCDC9-204ENST00000599398 CIPCQ9C0C6 399 aa23.48■■□□□ 1.35
CCDC9-204ENST00000599398 FAM204AQ9H8W3 233 aa23.48■■□□□ 1.35
CCDC9-204ENST00000599398 LIMA1Q9UHB6 759 aaKnown RBP23.48■■□□□ 1.35
CCDC9-204ENST00000599398 RAD54BQ9Y620 910 aa23.48■■□□□ 1.35
CCDC9-204ENST00000599398 THADAQ6YHU6 1953 aa23.48■■□□□ 1.35
CCDC9-204ENST00000599398 FAM170AA1A519 330 aa23.47■■□□□ 1.35
CCDC9-204ENST00000599398 GFRA2O00451 464 aa23.47■■□□□ 1.35
CCDC9-204ENST00000599398 IRAK2O43187 625 aa23.47■■□□□ 1.35
CCDC9-204ENST00000599398 TBL1XO60907 577 aa23.47■■□□□ 1.35
CCDC9-204ENST00000599398 HSF2BPO75031 334 aa23.47■■□□□ 1.35
CCDC9-204ENST00000599398 RHOBTB1O94844 696 aa23.47■■□□□ 1.35
CCDC9-204ENST00000599398 APOEP02649 317 aa23.47■■□□□ 1.35
CCDC9-204ENST00000599398 GLI1P08151 1106 aa23.47■■□□□ 1.35
CCDC9-204ENST00000599398 CDK17Q00537 523 aa23.47■■□□□ 1.35
CCDC9-204ENST00000599398 ARID5AQ03989 594 aa23.47■■□□□ 1.35
CCDC9-204ENST00000599398 ANO6Q4KMQ2 910 aa23.47■■□□□ 1.35
CCDC9-204ENST00000599398 ZC3H12AQ5D1E8 599 aaKnown RBP23.47■■□□□ 1.35
CCDC9-204ENST00000599398 PIK3R6Q5UE93 754 aa23.47■■□□□ 1.35
CCDC9-204ENST00000599398 NADSYN1Q6IA69 706 aa23.47■■□□□ 1.35
CCDC9-204ENST00000599398 C11orf74Q86VG3 221 aa23.47■■□□□ 1.35
CCDC9-204ENST00000599398 DEFB106AQ8N104 65 aa23.47■■□□□ 1.35
CCDC9-204ENST00000599398 RLN3Q8WXF3 142 aa23.47■■□□□ 1.35
CCDC9-204ENST00000599398 SLC39A13Q96H72 371 aa23.47■■□□□ 1.35
CCDC9-204ENST00000599398 LOXL4Q96JB6 756 aa23.47■■□□□ 1.35
CCDC9-204ENST00000599398 SPACA7Q96KW9 195 aa23.47■■□□□ 1.35
CCDC9-204ENST00000599398 DUSP15Q9H1R2 295 aaPredicted RBP23.47■■□□□ 1.35
CCDC9-204ENST00000599398 ARRDC1-AS1Q9H2J1 176 aa23.47■■□□□ 1.35
CCDC9-204ENST00000599398 NLRC4Q9NPP4 1024 aa23.47■■□□□ 1.35
CCDC9-204ENST00000599398 SEMA4GQ9NTN9 838 aa23.47■■□□□ 1.35
CCDC9-204ENST00000599398 ASNSD1Q9NWL6 643 aa23.47■■□□□ 1.35
CCDC9-204ENST00000599398 STIM2Q9P246 746 aa23.47■■□□□ 1.35
CCDC9-204ENST00000599398 SYNJ2BP-COX16A0A087WUM0 186 aa23.46■■□□□ 1.35
CCDC9-204ENST00000599398 A0A1W2PQF6 199 aa23.46■■□□□ 1.35
CCDC9-204ENST00000599398 TYW5A2RUC4 315 aaKnown RBP23.46■■□□□ 1.35
CCDC9-204ENST00000599398 LGALS16A8MUM7 142 aa23.46■■□□□ 1.35
CCDC9-204ENST00000599398 WASH3PC4AMC7 463 aa23.46■■□□□ 1.35
CCDC9-204ENST00000599398 LRP3O75074 770 aa23.46■■□□□ 1.35
CCDC9-204ENST00000599398 GFPT2O94808 682 aa23.46■■□□□ 1.35
CCDC9-204ENST00000599398 TGM1P22735 817 aa23.46■■□□□ 1.35
CCDC9-204ENST00000599398 ID4P47928 161 aa23.46■■□□□ 1.35
CCDC9-204ENST00000599398 PITX1P78337 314 aaPredicted RBP23.46■■□□□ 1.35
CCDC9-204ENST00000599398 UBXN1Q04323 297 aa23.46■■□□□ 1.35
CCDC9-204ENST00000599398 NCAPHQ15003 741 aa23.46■■□□□ 1.35
CCDC9-204ENST00000599398 SYCP1Q15431 976 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms