RNA–Protein interactions for RNA: ENST00000598938.1

LIG1-216, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-216ENST00000598938 BBS7Q8IWZ6 715 aa18.92■□□□□ 0.62
LIG1-216ENST00000598938 EMC1Q8N766 993 aa18.92■□□□□ 0.62
LIG1-216ENST00000598938 ZNF653Q96CK0 615 aa18.92■□□□□ 0.62
LIG1-216ENST00000598938 OTUB2Q96DC9 234 aa18.92■□□□□ 0.62
LIG1-216ENST00000598938 FCRL2Q96LA5 508 aaPredicted RBP18.92■□□□□ 0.62
LIG1-216ENST00000598938 ADAM33Q9BZ11 813 aa18.92■□□□□ 0.62
LIG1-216ENST00000598938 LINC00597Q9H2U6 94 aa18.92■□□□□ 0.62
LIG1-216ENST00000598938 FAM204AQ9H8W3 233 aa18.92■□□□□ 0.62
LIG1-216ENST00000598938 PARVAQ9NVD7 372 aa18.92■□□□□ 0.62
LIG1-216ENST00000598938 STAP1Q9ULZ2 295 aa18.92■□□□□ 0.62
LIG1-216ENST00000598938 C2CD4BA6NLJ0 364 aa18.91■□□□□ 0.62
LIG1-216ENST00000598938 ATMINO43313 823 aaPredicted RBP18.91■□□□□ 0.62
LIG1-216ENST00000598938 ARSAP15289 507 aa18.91■□□□□ 0.62
LIG1-216ENST00000598938 SDHBP21912 280 aa18.91■□□□□ 0.62
LIG1-216ENST00000598938 CORO1AP31146 461 aaKnown RBP18.91■□□□□ 0.62
LIG1-216ENST00000598938 GBP1P32455 592 aa18.91■□□□□ 0.62
LIG1-216ENST00000598938 RFC1P35251 1148 aaPredicted RBP18.91■□□□□ 0.62
LIG1-216ENST00000598938 MAGEA9P43362 315 aa18.91■□□□□ 0.62
LIG1-216ENST00000598938 TNK2Q07912 1038 aa18.91■□□□□ 0.62
LIG1-216ENST00000598938 MAMLD1Q13495 774 aa18.91■□□□□ 0.62
LIG1-216ENST00000598938 BNIPLQ7Z465 357 aa18.91■□□□□ 0.62
LIG1-216ENST00000598938 GPR161Q8N6U8 529 aaKnown RBP18.91■□□□□ 0.62
LIG1-216ENST00000598938 SUMF1Q8NBK3 374 aa18.91■□□□□ 0.62
LIG1-216ENST00000598938 RXFP2Q8WXD0 754 aa18.91■□□□□ 0.62
LIG1-216ENST00000598938 ATP2A3Q93084 1043 aa18.91■□□□□ 0.62
LIG1-216ENST00000598938 PGAP3Q96FM1 320 aaPredicted RBP18.91■□□□□ 0.62
LIG1-216ENST00000598938 OSBPL6Q9BZF3 934 aa18.91■□□□□ 0.62
LIG1-216ENST00000598938 EBF3Q9H4W6 596 aa18.91■□□□□ 0.62
LIG1-216ENST00000598938 DDIT4Q9NX09 232 aa18.91■□□□□ 0.62
LIG1-216ENST00000598938 CALCOCO1Q9P1Z2 691 aa18.91■□□□□ 0.62
LIG1-216ENST00000598938 CNOT8Q9UFF9 292 aaKnown RBP18.91■□□□□ 0.62
LIG1-216ENST00000598938 FBXO4Q9UKT5 387 aa18.91■□□□□ 0.62
LIG1-216ENST00000598938 AGO1Q9UL18 857 aaKnown RBP18.91■□□□□ 0.62
LIG1-216ENST00000598938 ZNF510Q9Y2H8 683 aa18.91■□□□□ 0.62
LIG1-216ENST00000598938 CACNA1BQ00975 2339 aa18.91■□□□□ 0.62
LIG1-216ENST00000598938 GOLGA6L6A8MZA4 724 aa18.9■□□□□ 0.62
LIG1-216ENST00000598938 M0QYT0 321 aa18.9■□□□□ 0.62
LIG1-216ENST00000598938 LATS1O95835 1130 aa18.9■□□□□ 0.62
LIG1-216ENST00000598938 PDGFRAP16234 1089 aa18.9■□□□□ 0.62
LIG1-216ENST00000598938 TFE3P19532 575 aaPredicted RBP18.9■□□□□ 0.62
LIG1-216ENST00000598938 PTPN9P43378 593 aa18.9■□□□□ 0.62
LIG1-216ENST00000598938 HARS2P49590 506 aaKnown RBP18.9■□□□□ 0.62
LIG1-216ENST00000598938 SULT1E1P49888 294 aa18.9■□□□□ 0.62
LIG1-216ENST00000598938 RUNX3Q13761 415 aa18.9■□□□□ 0.62
LIG1-216ENST00000598938 NUGGCQ68CJ6 796 aa18.9■□□□□ 0.62
LIG1-216ENST00000598938 UNC45BQ8IWX7 931 aa18.9■□□□□ 0.62
LIG1-216ENST00000598938 ADGRG2Q8IZP9 1017 aa18.9■□□□□ 0.62
LIG1-216ENST00000598938 CFAP57Q96MR6 1250 aa18.9■□□□□ 0.62
LIG1-216ENST00000598938 MCEEQ96PE7 176 aa18.9■□□□□ 0.62
LIG1-216ENST00000598938 TBCBQ99426 244 aa18.9■□□□□ 0.62
LIG1-216ENST00000598938 THAP2Q9H0W7 228 aa18.9■□□□□ 0.62
LIG1-216ENST00000598938 SPTLC3Q9NUV7 552 aa18.9■□□□□ 0.62
LIG1-216ENST00000598938 GTSE1Q9NYZ3 720 aa18.9■□□□□ 0.62
LIG1-216ENST00000598938 EPG5Q9HCE0 2579 aa18.9■□□□□ 0.62
LIG1-216ENST00000598938 COL4A3Q01955 1670 aa18.89■□□□□ 0.61
LIG1-216ENST00000598938 ANKRD62A6NC57 917 aa18.89■□□□□ 0.61
LIG1-216ENST00000598938 OTOL1A6NHN0 477 aaPredicted RBP18.89■□□□□ 0.61
LIG1-216ENST00000598938 ENDOD1O94919 500 aa18.89■□□□□ 0.61
LIG1-216ENST00000598938 NFATC1O95644 943 aa18.89■□□□□ 0.61
LIG1-216ENST00000598938 ABCB4P21439 1286 aa18.89■□□□□ 0.61
LIG1-216ENST00000598938 GALCP54803 685 aa18.89■□□□□ 0.61
LIG1-216ENST00000598938 MLLT6P55198 1093 aaPredicted RBP18.89■□□□□ 0.61
LIG1-216ENST00000598938 RPL7AP62424 266 aaKnown RBP18.89■□□□□ 0.61
LIG1-216ENST00000598938 PRKCQQ04759 706 aa18.89■□□□□ 0.61
LIG1-216ENST00000598938 ITPRIPL2Q3MIP1 535 aa18.89■□□□□ 0.61
LIG1-216ENST00000598938 CCDC14Q49A88 953 aa18.89■□□□□ 0.61
LIG1-216ENST00000598938 SLC44A4Q53GD3 710 aa18.89■□□□□ 0.61
LIG1-216ENST00000598938 TMTC1Q8IUR5 882 aa18.89■□□□□ 0.61
LIG1-216ENST00000598938 DENND1CQ8IV53 801 aa18.89■□□□□ 0.61
LIG1-216ENST00000598938 FAM217AQ8IXS0 508 aa18.89■□□□□ 0.61
LIG1-216ENST00000598938 CCDC170Q8IYT3 715 aa18.89■□□□□ 0.61
LIG1-216ENST00000598938 CPA6Q8N4T0 437 aa18.89■□□□□ 0.61
LIG1-216ENST00000598938 CSGALNACT1Q8TDX6 532 aa18.89■□□□□ 0.61
LIG1-216ENST00000598938 AZIN2Q96A70 460 aa18.89■□□□□ 0.61
LIG1-216ENST00000598938 ECT2Q9H8V3 914 aa18.89■□□□□ 0.61
LIG1-216ENST00000598938 HEBP1Q9NRV9 189 aa18.89■□□□□ 0.61
LIG1-216ENST00000598938 PIGVQ9NUD9 493 aa18.89■□□□□ 0.61
LIG1-216ENST00000598938 TMEM51Q9NW97 253 aa18.89■□□□□ 0.61
LIG1-216ENST00000598938 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.89■□□□□ 0.61
LIG1-216ENST00000598938 STOML2Q9UJZ1 356 aa18.89■□□□□ 0.61
LIG1-216ENST00000598938 SCINQ9Y6U3 715 aa18.89■□□□□ 0.61
LIG1-216ENST00000598938 TICRRQ7Z2Z1 1910 aa18.89■□□□□ 0.61
LIG1-216ENST00000598938 SYNJ2BP-COX16A0A087WUM0 186 aa18.88■□□□□ 0.61
LIG1-216ENST00000598938 KANSL1LA0AUZ9 987 aa18.88■□□□□ 0.61
LIG1-216ENST00000598938 LCA5LO95447 670 aa18.88■□□□□ 0.61
LIG1-216ENST00000598938 F9P00740 461 aa18.88■□□□□ 0.61
LIG1-216ENST00000598938 CYP17A1P05093 508 aa18.88■□□□□ 0.61
LIG1-216ENST00000598938 CYP1A2P05177 515 aa18.88■□□□□ 0.61
LIG1-216ENST00000598938 GLULP15104 373 aa18.88■□□□□ 0.61
LIG1-216ENST00000598938 GPD1P21695 349 aa18.88■□□□□ 0.61
LIG1-216ENST00000598938 SDC4P31431 198 aa18.88■□□□□ 0.61
LIG1-216ENST00000598938 GSDMDP57764 484 aa18.88■□□□□ 0.61
LIG1-216ENST00000598938 NME3Q13232 169 aa18.88■□□□□ 0.61
LIG1-216ENST00000598938 ZC3H12AQ5D1E8 599 aaKnown RBP18.88■□□□□ 0.61
LIG1-216ENST00000598938 DCUN1D2Q6PH85 259 aa18.88■□□□□ 0.61
LIG1-216ENST00000598938 TMEM139Q8IV31 216 aa18.88■□□□□ 0.61
LIG1-216ENST00000598938 CENPIQ92674 756 aaPredicted RBP18.88■□□□□ 0.61
LIG1-216ENST00000598938 PACSIN1Q9BY11 444 aa18.88■□□□□ 0.61
LIG1-216ENST00000598938 MRPL47Q9HD33 250 aaKnown RBP18.88■□□□□ 0.61
LIG1-216ENST00000598938 COX16Q9P0S2 106 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms