RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 ZNF132P52740 706 aa17.26■□□□□ 0.35
SHKBP1-215ENST00000597649 INCA1Q0VD86 236 aa17.26■□□□□ 0.35
SHKBP1-215ENST00000597649 DPYDQ12882 1025 aa17.26■□□□□ 0.35
SHKBP1-215ENST00000597649 CACUL1Q86Y37 369 aa17.26■□□□□ 0.35
SHKBP1-215ENST00000597649 SLC9A9Q8IVB4 645 aa17.26■□□□□ 0.35
SHKBP1-215ENST00000597649 TMEM174Q8WUU8 243 aa17.26■□□□□ 0.35
SHKBP1-215ENST00000597649 PRCCQ92733 491 aaPredicted RBP17.26■□□□□ 0.35
SHKBP1-215ENST00000597649 TAF4BQ92750 862 aa17.26■□□□□ 0.35
SHKBP1-215ENST00000597649 SMARCE1Q969G3 411 aa17.26■□□□□ 0.35
SHKBP1-215ENST00000597649 NUP58Q9BVL2 599 aa17.26■□□□□ 0.35
SHKBP1-215ENST00000597649 NUP62CLQ9H1M0 184 aa17.26■□□□□ 0.35
SHKBP1-215ENST00000597649 KCTD10Q9H3F6 313 aa17.26■□□□□ 0.35
SHKBP1-215ENST00000597649 RMND1Q9NWS8 449 aa17.26■□□□□ 0.35
SHKBP1-215ENST00000597649 AGO1Q9UL18 857 aaKnown RBP17.26■□□□□ 0.35
SHKBP1-215ENST00000597649 USP3Q9Y6I4 520 aa17.26■□□□□ 0.35
SHKBP1-215ENST00000597649 MYH10P35580 1976 aa17.26■□□□□ 0.35
SHKBP1-215ENST00000597649 CFAP46Q8IYW2 2715 aa17.25■□□□□ 0.35
SHKBP1-215ENST00000597649 NPC1O15118 1278 aa17.25■□□□□ 0.35
SHKBP1-215ENST00000597649 SYNCRIPO60506 623 aaKnown RBP17.25■□□□□ 0.35
SHKBP1-215ENST00000597649 CER1O95813 267 aa17.25■□□□□ 0.35
SHKBP1-215ENST00000597649 HLA-DRAP01903 254 aa17.25■□□□□ 0.35
SHKBP1-215ENST00000597649 CORO1AP31146 461 aaKnown RBP17.25■□□□□ 0.35
SHKBP1-215ENST00000597649 KIF19Q2TAC6 998 aa17.25■□□□□ 0.35
SHKBP1-215ENST00000597649 KMT5BQ4FZB7 885 aa17.25■□□□□ 0.35
SHKBP1-215ENST00000597649 CCDC186Q7Z3E2 898 aa17.25■□□□□ 0.35
SHKBP1-215ENST00000597649 FAM124AQ86V42 546 aa17.25■□□□□ 0.35
SHKBP1-215ENST00000597649 KIAA0895Q8NCT3 520 aa17.25■□□□□ 0.35
SHKBP1-215ENST00000597649 GOLGA5Q8TBA6 731 aa17.25■□□□□ 0.35
SHKBP1-215ENST00000597649 RHBDD1Q8TEB9 315 aa17.25■□□□□ 0.35
SHKBP1-215ENST00000597649 LRIG1Q96JA1 1093 aa17.25■□□□□ 0.35
SHKBP1-215ENST00000597649 CLSTN2Q9H4D0 955 aa17.25■□□□□ 0.35
SHKBP1-215ENST00000597649 PNPLA8Q9NP80 782 aa17.25■□□□□ 0.35
SHKBP1-215ENST00000597649 CLIC5Q9NZA1 410 aa17.25■□□□□ 0.35
SHKBP1-215ENST00000597649 ZNF510Q9Y2H8 683 aa17.25■□□□□ 0.35
SHKBP1-215ENST00000597649 PCDHGB2Q9Y5G2 931 aa17.25■□□□□ 0.35
SHKBP1-215ENST00000597649 TRABD2BA6NFA1 517 aa17.24■□□□□ 0.35
SHKBP1-215ENST00000597649 GOLGA8CPA6NN73 597 aa17.24■□□□□ 0.35
SHKBP1-215ENST00000597649 KCNK3O14649 394 aa17.24■□□□□ 0.35
SHKBP1-215ENST00000597649 CHKAP35790 457 aa17.24■□□□□ 0.35
SHKBP1-215ENST00000597649 COG7P83436 770 aa17.24■□□□□ 0.35
SHKBP1-215ENST00000597649 CYP4F3Q08477 520 aa17.24■□□□□ 0.35
SHKBP1-215ENST00000597649 EFEMP1Q12805 493 aa17.24■□□□□ 0.35
SHKBP1-215ENST00000597649 CAMK2BQ13554 666 aa17.24■□□□□ 0.35
SHKBP1-215ENST00000597649 PPP1R26Q5T8A7 1209 aaPredicted RBP17.24■□□□□ 0.35
SHKBP1-215ENST00000597649 IL27RAQ6UWB1 636 aa17.24■□□□□ 0.35
SHKBP1-215ENST00000597649 DENND1CQ8IV53 801 aa17.24■□□□□ 0.35
SHKBP1-215ENST00000597649 TMC2Q8TDI7 906 aa17.24■□□□□ 0.35
SHKBP1-215ENST00000597649 CRELD1Q96HD1 420 aa17.24■□□□□ 0.35
SHKBP1-215ENST00000597649 GSDMAQ96QA5 445 aa17.24■□□□□ 0.35
SHKBP1-215ENST00000597649 NT5C1AQ9BXI3 368 aa17.24■□□□□ 0.35
SHKBP1-215ENST00000597649 DUSP16Q9BY84 665 aa17.24■□□□□ 0.35
SHKBP1-215ENST00000597649 C6orf106Q9H6K1 298 aaPredicted RBP17.24■□□□□ 0.35
SHKBP1-215ENST00000597649 DKK4Q9UBT3 224 aa17.24■□□□□ 0.35
SHKBP1-215ENST00000597649 RASAL2Q9UJF2 1139 aa17.24■□□□□ 0.35
SHKBP1-215ENST00000597649 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.24■□□□□ 0.35
SHKBP1-215ENST00000597649 SNX11Q9Y5W9 270 aa17.24■□□□□ 0.35
SHKBP1-215ENST00000597649 ASH1LQ9NR48 2969 aaKnown RBP17.23■□□□□ 0.35
SHKBP1-215ENST00000597649 EPHX1P07099 455 aa17.23■□□□□ 0.35
SHKBP1-215ENST00000597649 RALAP11233 206 aa17.23■□□□□ 0.35
SHKBP1-215ENST00000597649 HLA-EP13747 358 aa17.23■□□□□ 0.35
SHKBP1-215ENST00000597649 ACSL1P33121 698 aa17.23■□□□□ 0.35
SHKBP1-215ENST00000597649 PSEN1P49768 467 aa17.23■□□□□ 0.35
SHKBP1-215ENST00000597649 SKOR2Q2VWA4 1001 aaPredicted RBP17.23■□□□□ 0.35
SHKBP1-215ENST00000597649 KCNT1Q5JUK3 1230 aa17.23■□□□□ 0.35
SHKBP1-215ENST00000597649 ANKS1BQ7Z6G8 1248 aa17.23■□□□□ 0.35
SHKBP1-215ENST00000597649 UCMAQ8WVF2 138 aa17.23■□□□□ 0.35
SHKBP1-215ENST00000597649 ERCC4Q92889 916 aaPredicted RBP17.23■□□□□ 0.35
SHKBP1-215ENST00000597649 CDC6Q99741 560 aa17.23■□□□□ 0.35
SHKBP1-215ENST00000597649 CIPCQ9C0C6 399 aa17.23■□□□□ 0.35
SHKBP1-215ENST00000597649 SCUBE2Q9NQ36 999 aa17.23■□□□□ 0.35
SHKBP1-215ENST00000597649 FAM149AA5PLN7 773 aa17.22■□□□□ 0.35
SHKBP1-215ENST00000597649 IKBKBO14920 756 aa17.22■□□□□ 0.35
SHKBP1-215ENST00000597649 FLRT2O43155 660 aa17.22■□□□□ 0.35
SHKBP1-215ENST00000597649 KIF20AO95235 890 aa17.22■□□□□ 0.35
SHKBP1-215ENST00000597649 NR3C1P04150 777 aa17.22■□□□□ 0.35
SHKBP1-215ENST00000597649 ACADMP11310 421 aa17.22■□□□□ 0.35
SHKBP1-215ENST00000597649 CD58P19256 250 aa17.22■□□□□ 0.35
SHKBP1-215ENST00000597649 PIK3CAP42336 1068 aa17.22■□□□□ 0.35
SHKBP1-215ENST00000597649 NFKBIBQ15653 356 aa17.22■□□□□ 0.35
SHKBP1-215ENST00000597649 TADA2BQ86TJ2 420 aa17.22■□□□□ 0.35
SHKBP1-215ENST00000597649 FAM217AQ8IXS0 508 aa17.22■□□□□ 0.35
SHKBP1-215ENST00000597649 TAS1R2Q8TE23 839 aa17.22■□□□□ 0.35
SHKBP1-215ENST00000597649 GTPBP4Q9BZE4 634 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-215ENST00000597649 DCLK3Q9C098 648 aa17.22■□□□□ 0.35
SHKBP1-215ENST00000597649 TIMM44O43615 452 aa17.21■□□□□ 0.35
SHKBP1-215ENST00000597649 RHOBTB3O94955 611 aa17.21■□□□□ 0.35
SHKBP1-215ENST00000597649 C7P10643 843 aa17.21■□□□□ 0.35
SHKBP1-215ENST00000597649 AFF3P51826 1226 aaKnown RBP17.21■□□□□ 0.35
SHKBP1-215ENST00000597649 PPP3CAQ08209 521 aa17.21■□□□□ 0.35
SHKBP1-215ENST00000597649 CAMK2GQ13555 558 aaPredicted RBP17.21■□□□□ 0.35
SHKBP1-215ENST00000597649 EIF4HQ15056 248 aaKnown RBP17.21■□□□□ 0.35
SHKBP1-215ENST00000597649 PTPRNQ16849 979 aa17.21■□□□□ 0.35
SHKBP1-215ENST00000597649 CCDC183Q5T5S1 534 aa17.21■□□□□ 0.35
SHKBP1-215ENST00000597649 LAYNQ6UX15 382 aa17.21■□□□□ 0.35
SHKBP1-215ENST00000597649 SERPINA13PQ6UXR4 307 aa17.21■□□□□ 0.35
SHKBP1-215ENST00000597649 CPXM2Q8N436 756 aa17.21■□□□□ 0.35
SHKBP1-215ENST00000597649 ZNF366Q8N895 744 aa17.21■□□□□ 0.35
SHKBP1-215ENST00000597649 OR2T3Q8NH03 318 aa17.21■□□□□ 0.35
SHKBP1-215ENST00000597649 DDI1Q8WTU0 396 aa17.21■□□□□ 0.35
SHKBP1-215ENST00000597649 CYB5D2Q8WUJ1 264 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms