RNA–Protein interactions for RNA: ENST00000597023.1

PPFIA4-208, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 4

Gene PPFIA4, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-208ENST00000597023 HOXD9P28356 352 aaPredicted RBP16.22■□□□□ 0.19
PPFIA4-208ENST00000597023 GNA15P30679 374 aa16.22■□□□□ 0.19
PPFIA4-208ENST00000597023 TBX4P57082 545 aa16.22■□□□□ 0.19
PPFIA4-208ENST00000597023 BYSLQ13895 437 aaKnown RBP16.22■□□□□ 0.19
PPFIA4-208ENST00000597023 EXOC3L4Q17RC7 722 aa16.22■□□□□ 0.19
PPFIA4-208ENST00000597023 MSANTD2Q6P1R3 559 aa16.22■□□□□ 0.19
PPFIA4-208ENST00000597023 KIAA1324Q6UXG2 1013 aaKnown RBP16.22■□□□□ 0.19
PPFIA4-208ENST00000597023 ANKS1BQ7Z6G8 1248 aa16.22■□□□□ 0.19
PPFIA4-208ENST00000597023 ELOVL2Q9NXB9 296 aa16.22■□□□□ 0.19
PPFIA4-208ENST00000597023 THAP10Q9P2Z0 257 aaPredicted RBP16.22■□□□□ 0.19
PPFIA4-208ENST00000597023 TJP2Q9UDY2 1190 aa16.22■□□□□ 0.19
PPFIA4-208ENST00000597023 MYO18AQ92614 2054 aaKnown RBP16.22■□□□□ 0.19
PPFIA4-208ENST00000597023 IGHV1OR15-9A0A0B4J2B8 117 aa16.21■□□□□ 0.19
PPFIA4-208ENST00000597023 C4orf47A7E2U8 309 aa16.21■□□□□ 0.19
PPFIA4-208ENST00000597023 E5RJQ4 531 aa16.21■□□□□ 0.19
PPFIA4-208ENST00000597023 KHNYNO15037 678 aaKnown RBP16.21■□□□□ 0.19
PPFIA4-208ENST00000597023 MED7O43513 233 aa16.21■□□□□ 0.19
PPFIA4-208ENST00000597023 TBL1XO60907 577 aa16.21■□□□□ 0.19
PPFIA4-208ENST00000597023 PNMA6AP0CW24 399 aaPredicted RBP16.21■□□□□ 0.19
PPFIA4-208ENST00000597023 SLC6A4P31645 630 aa16.21■□□□□ 0.19
PPFIA4-208ENST00000597023 IRX4P78413 519 aa16.21■□□□□ 0.19
PPFIA4-208ENST00000597023 RPL6Q02878 288 aaKnown RBP16.21■□□□□ 0.19
PPFIA4-208ENST00000597023 ZNF234Q14588 700 aa16.21■□□□□ 0.19
PPFIA4-208ENST00000597023 FUT11Q495W5 492 aa16.21■□□□□ 0.19
PPFIA4-208ENST00000597023 ADGRF1Q5T601 910 aa16.21■□□□□ 0.19
PPFIA4-208ENST00000597023 SYPL2Q5VXT5 272 aa16.21■□□□□ 0.19
PPFIA4-208ENST00000597023 PASD1Q8IV76 773 aa16.21■□□□□ 0.19
PPFIA4-208ENST00000597023 WFDC5Q8TCV5 224 aa16.21■□□□□ 0.19
PPFIA4-208ENST00000597023 DQX1Q8TE96 717 aaKnown RBP16.21■□□□□ 0.19
PPFIA4-208ENST00000597023 CYB5D2Q8WUJ1 264 aa16.21■□□□□ 0.19
PPFIA4-208ENST00000597023 UCMAQ8WVF2 138 aa16.21■□□□□ 0.19
PPFIA4-208ENST00000597023 MRGPRX1Q96LB2 322 aa16.21■□□□□ 0.19
PPFIA4-208ENST00000597023 NUP62CLQ9H1M0 184 aa16.21■□□□□ 0.19
PPFIA4-208ENST00000597023 FSCN3Q9NQT6 498 aa16.21■□□□□ 0.19
PPFIA4-208ENST00000597023 STIM2Q9P246 746 aa16.21■□□□□ 0.19
PPFIA4-208ENST00000597023 APEX2Q9UBZ4 518 aa16.21■□□□□ 0.19
PPFIA4-208ENST00000597023 LNP1A1A4G5 178 aa16.2■□□□□ 0.18
PPFIA4-208ENST00000597023 FAM170AA1A519 330 aa16.2■□□□□ 0.18
PPFIA4-208ENST00000597023 GFRA2O00451 464 aa16.2■□□□□ 0.18
PPFIA4-208ENST00000597023 PAPSS1O43252 624 aaPredicted RBP16.2■□□□□ 0.18
PPFIA4-208ENST00000597023 MOCS2O96007 188 aaPredicted RBP16.2■□□□□ 0.18
PPFIA4-208ENST00000597023 IGLV3-27P01718 113 aa16.2■□□□□ 0.18
PPFIA4-208ENST00000597023 HLA-EP13747 358 aa16.2■□□□□ 0.18
PPFIA4-208ENST00000597023 ITPKAP23677 461 aa16.2■□□□□ 0.18
PPFIA4-208ENST00000597023 PRKCHP24723 683 aa16.2■□□□□ 0.18
PPFIA4-208ENST00000597023 HLA-FP30511 346 aa16.2■□□□□ 0.18
PPFIA4-208ENST00000597023 ACADSBP45954 432 aa16.2■□□□□ 0.18
PPFIA4-208ENST00000597023 RPL34P49207 117 aaKnown RBP16.2■□□□□ 0.18
PPFIA4-208ENST00000597023 LIMK1P53667 647 aa16.2■□□□□ 0.18
PPFIA4-208ENST00000597023 ARID5AQ03989 594 aa16.2■□□□□ 0.18
PPFIA4-208ENST00000597023 LYSMD4Q5XG99 296 aa16.2■□□□□ 0.18
PPFIA4-208ENST00000597023 NADSYN1Q6IA69 706 aa16.2■□□□□ 0.18
PPFIA4-208ENST00000597023 CHST9Q7L1S5 443 aa16.2■□□□□ 0.18
PPFIA4-208ENST00000597023 ENOSF1Q7L5Y1 443 aa16.2■□□□□ 0.18
PPFIA4-208ENST00000597023 CACUL1Q86Y37 369 aa16.2■□□□□ 0.18
PPFIA4-208ENST00000597023 ZNF366Q8N895 744 aa16.2■□□□□ 0.18
PPFIA4-208ENST00000597023 MYEOVQ96EZ4 313 aa16.2■□□□□ 0.18
PPFIA4-208ENST00000597023 SLC4A5Q9BY07 1137 aa16.2■□□□□ 0.18
PPFIA4-208ENST00000597023 SLC2A11Q9BYW1 496 aa16.2■□□□□ 0.18
PPFIA4-208ENST00000597023 MKRN2Q9H000 416 aaKnown RBP16.2■□□□□ 0.18
PPFIA4-208ENST00000597023 THAP9Q9H5L6 903 aa16.2■□□□□ 0.18
PPFIA4-208ENST00000597023 SIX2Q9NPC8 291 aa16.2■□□□□ 0.18
PPFIA4-208ENST00000597023 ABCB8Q9NUT2 735 aa16.2■□□□□ 0.18
PPFIA4-208ENST00000597023 XPO7Q9UIA9 1087 aaKnown RBP16.2■□□□□ 0.18
PPFIA4-208ENST00000597023 STOML2Q9UJZ1 356 aa16.2■□□□□ 0.18
PPFIA4-208ENST00000597023 DNAJC12Q9UKB3 198 aa16.2■□□□□ 0.18
PPFIA4-208ENST00000597023 SPAG17Q6Q759 2223 aa16.19■□□□□ 0.18
PPFIA4-208ENST00000597023 CAPN9O14815 690 aa16.19■□□□□ 0.18
PPFIA4-208ENST00000597023 TM4SF5O14894 197 aa16.19■□□□□ 0.18
PPFIA4-208ENST00000597023 ACSL4O60488 711 aa16.19■□□□□ 0.18
PPFIA4-208ENST00000597023 EPHX1P07099 455 aa16.19■□□□□ 0.18
PPFIA4-208ENST00000597023 SLC11A2P49281 568 aa16.19■□□□□ 0.18
PPFIA4-208ENST00000597023 PITX1P78337 314 aaPredicted RBP16.19■□□□□ 0.18
PPFIA4-208ENST00000597023 STARD3Q14849 445 aa16.19■□□□□ 0.18
PPFIA4-208ENST00000597023 TAF5Q15542 800 aa16.19■□□□□ 0.18
PPFIA4-208ENST00000597023 MAN2A1Q16706 1144 aa16.19■□□□□ 0.18
PPFIA4-208ENST00000597023 FAM133BQ5BKY9 247 aaKnown RBP16.19■□□□□ 0.18
PPFIA4-208ENST00000597023 TRIM61Q5EBN2 209 aa16.19■□□□□ 0.18
PPFIA4-208ENST00000597023 PIK3R6Q5UE93 754 aa16.19■□□□□ 0.18
PPFIA4-208ENST00000597023 TAC4Q86UU9 113 aa16.19■□□□□ 0.18
PPFIA4-208ENST00000597023 UNC45BQ8IWX7 931 aa16.19■□□□□ 0.18
PPFIA4-208ENST00000597023 WDTC1Q8N5D0 677 aa16.19■□□□□ 0.18
PPFIA4-208ENST00000597023 FCRL2Q96LA5 508 aaPredicted RBP16.19■□□□□ 0.18
PPFIA4-208ENST00000597023 LMBRD1Q9NUN5 540 aa16.19■□□□□ 0.18
PPFIA4-208ENST00000597023 THADAQ6YHU6 1953 aa16.18■□□□□ 0.18
PPFIA4-208ENST00000597023 PES1O00541 588 aaKnown RBP16.18■□□□□ 0.18
PPFIA4-208ENST00000597023 AP5Z1O43299 807 aa16.18■□□□□ 0.18
PPFIA4-208ENST00000597023 SYNCRIPO60506 623 aaKnown RBP16.18■□□□□ 0.18
PPFIA4-208ENST00000597023 ZNF217O75362 1048 aa16.18■□□□□ 0.18
PPFIA4-208ENST00000597023 LATS1O95835 1130 aa16.18■□□□□ 0.18
PPFIA4-208ENST00000597023 RPS24P62847 133 aaKnown RBP16.18■□□□□ 0.18
PPFIA4-208ENST00000597023 ZNF33AQ06730 810 aa16.18■□□□□ 0.18
PPFIA4-208ENST00000597023 PDCLQ13371 301 aa16.18■□□□□ 0.18
PPFIA4-208ENST00000597023 VWA3BQ502W6 1294 aa16.18■□□□□ 0.18
PPFIA4-208ENST00000597023 NUGGCQ68CJ6 796 aa16.18■□□□□ 0.18
PPFIA4-208ENST00000597023 SERPINA13PQ6UXR4 307 aa16.18■□□□□ 0.18
PPFIA4-208ENST00000597023 SLC36A4Q6YBV0 504 aa16.18■□□□□ 0.18
PPFIA4-208ENST00000597023 TMEM110Q86TL2 294 aa16.18■□□□□ 0.18
PPFIA4-208ENST00000597023 SYT12Q8IV01 421 aa16.18■□□□□ 0.18
PPFIA4-208ENST00000597023 SLC41A1Q8IVJ1 513 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms