RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 MPPE1Q53F39 396 aa21.38■■□□□ 1.01
TRIM47-207ENST00000593089 WDR45BQ5MNZ6 344 aa21.38■■□□□ 1.01
TRIM47-207ENST00000593089 TMEM215Q68D42 235 aa21.38■■□□□ 1.01
TRIM47-207ENST00000593089 METTL3Q86U44 580 aaKnown RBP21.38■■□□□ 1.01
TRIM47-207ENST00000593089 CACUL1Q86Y37 369 aa21.38■■□□□ 1.01
TRIM47-207ENST00000593089 TMPRSS6Q8IU80 811 aa21.38■■□□□ 1.01
TRIM47-207ENST00000593089 SPATA20Q8TB22 786 aa21.38■■□□□ 1.01
TRIM47-207ENST00000593089 GPR174Q9BXC1 333 aa21.38■■□□□ 1.01
TRIM47-207ENST00000593089 ADAM33Q9BZ11 813 aa21.38■■□□□ 1.01
TRIM47-207ENST00000593089 ITM2CQ9NQX7 267 aa21.38■■□□□ 1.01
TRIM47-207ENST00000593089 WSB2Q9NYS7 404 aaPredicted RBP21.38■■□□□ 1.01
TRIM47-207ENST00000593089 USP36Q9P275 1121 aaKnown RBP21.38■■□□□ 1.01
TRIM47-207ENST00000593089 SUSD2Q9UGT4 822 aa21.38■■□□□ 1.01
TRIM47-207ENST00000593089 HBS1LQ9Y450 684 aaKnown RBP21.38■■□□□ 1.01
TRIM47-207ENST00000593089 CKAP5Q14008 2032 aa21.38■■□□□ 1.01
TRIM47-207ENST00000593089 KCNJ18B7U540 433 aa21.37■■□□□ 1.01
TRIM47-207ENST00000593089 MSI1O43347 362 aaKnown RBP21.37■■□□□ 1.01
TRIM47-207ENST00000593089 EPHX1P07099 455 aa21.37■■□□□ 1.01
TRIM47-207ENST00000593089 SETSIPP0DME0 302 aa21.37■■□□□ 1.01
TRIM47-207ENST00000593089 GNSP15586 552 aa21.37■■□□□ 1.01
TRIM47-207ENST00000593089 HOXD9P28356 352 aaPredicted RBP21.37■■□□□ 1.01
TRIM47-207ENST00000593089 FMO5P49326 533 aa21.37■■□□□ 1.01
TRIM47-207ENST00000593089 RGS7P49802 495 aa21.37■■□□□ 1.01
TRIM47-207ENST00000593089 SIM1P81133 766 aaPredicted RBP21.37■■□□□ 1.01
TRIM47-207ENST00000593089 TMEM270Q6UE05 265 aa21.37■■□□□ 1.01
TRIM47-207ENST00000593089 SERPINA13PQ6UXR4 307 aa21.37■■□□□ 1.01
TRIM47-207ENST00000593089 RBBP8NLQ8NC74 664 aaPredicted RBP21.37■■□□□ 1.01
TRIM47-207ENST00000593089 KCTD13Q8WZ19 329 aa21.37■■□□□ 1.01
TRIM47-207ENST00000593089 PRCCQ92733 491 aaPredicted RBP21.37■■□□□ 1.01
TRIM47-207ENST00000593089 SIPA1Q96FS4 1042 aa21.37■■□□□ 1.01
TRIM47-207ENST00000593089 ABCC13Q9NSE7 274 aa21.37■■□□□ 1.01
TRIM47-207ENST00000593089 UPK3BL1B0FP48 263 aa21.36■■□□□ 1.01
TRIM47-207ENST00000593089 UPK3BL2E5RIL1 263 aa21.36■■□□□ 1.01
TRIM47-207ENST00000593089 PIK3R2O00459 728 aa21.36■■□□□ 1.01
TRIM47-207ENST00000593089 PSMA7O14818 248 aa21.36■■□□□ 1.01
TRIM47-207ENST00000593089 ACADMP11310 421 aa21.36■■□□□ 1.01
TRIM47-207ENST00000593089 NCAM1P13591 858 aa21.36■■□□□ 1.01
TRIM47-207ENST00000593089 TPMTP51580 245 aa21.36■■□□□ 1.01
TRIM47-207ENST00000593089 COPAP53621 1224 aa21.36■■□□□ 1.01
TRIM47-207ENST00000593089 DAOAP59103 153 aa21.36■■□□□ 1.01
TRIM47-207ENST00000593089 STIM1Q13586 685 aa21.36■■□□□ 1.01
TRIM47-207ENST00000593089 E2F5Q15329 346 aa21.36■■□□□ 1.01
TRIM47-207ENST00000593089 CCDC40Q4G0X9 1142 aa21.36■■□□□ 1.01
TRIM47-207ENST00000593089 PKDCCQ504Y2 493 aa21.36■■□□□ 1.01
TRIM47-207ENST00000593089 TFAP2BQ92481 460 aa21.36■■□□□ 1.01
TRIM47-207ENST00000593089 NT5C1BQ96P26 610 aa21.36■■□□□ 1.01
TRIM47-207ENST00000593089 GTPBP4Q9BZE4 634 aaKnown RBP21.36■■□□□ 1.01
TRIM47-207ENST00000593089 METTL14Q9HCE5 456 aaKnown RBP21.36■■□□□ 1.01
TRIM47-207ENST00000593089 CNGB3Q9NQW8 809 aa21.36■■□□□ 1.01
TRIM47-207ENST00000593089 HOOK1Q9UJC3 728 aaKnown RBP21.36■■□□□ 1.01
TRIM47-207ENST00000593089 KIAA1257Q9ULG3 409 aa21.36■■□□□ 1.01
TRIM47-207ENST00000593089 PCDHB4Q9Y5E5 795 aa21.36■■□□□ 1.01
TRIM47-207ENST00000593089 CEP295Q9C0D2 2601 aa21.36■■□□□ 1.01
TRIM47-207ENST00000593089 PCNX2A6NKB5 2137 aa21.35■■□□□ 1.01
TRIM47-207ENST00000593089 TIMM44O43615 452 aa21.35■■□□□ 1.01
TRIM47-207ENST00000593089 HYAL3O43820 417 aaPredicted RBP21.35■■□□□ 1.01
TRIM47-207ENST00000593089 HLA-EP13747 358 aa21.35■■□□□ 1.01
TRIM47-207ENST00000593089 CD59P13987 128 aa21.35■■□□□ 1.01
TRIM47-207ENST00000593089 LCLAT1Q6UWP7 414 aa21.35■■□□□ 1.01
TRIM47-207ENST00000593089 PPM1KQ8N3J5 372 aa21.35■■□□□ 1.01
TRIM47-207ENST00000593089 TMA16Q96EY4 203 aaKnown RBP21.35■■□□□ 1.01
TRIM47-207ENST00000593089 TIGD1Q96MW7 591 aa21.35■■□□□ 1.01
TRIM47-207ENST00000593089 MIR1-1HGQ9H1L0 117 aa21.35■■□□□ 1.01
TRIM47-207ENST00000593089 DNAAF2Q9NVR5 837 aaKnown RBP21.35■■□□□ 1.01
TRIM47-207ENST00000593089 ZFHX4Q86UP3 3567 aa21.35■■□□□ 1.01
TRIM47-207ENST00000593089 M0QYV0 167 aa21.34■■□□□ 1.01
TRIM47-207ENST00000593089 RNF225M0QZC1 329 aaPredicted RBP21.34■■□□□ 1.01
TRIM47-207ENST00000593089 CALCAP01258 141 aa21.34■■□□□ 1.01
TRIM47-207ENST00000593089 PAEPP09466 180 aa21.34■■□□□ 1.01
TRIM47-207ENST00000593089 CD44P16070 742 aaKnown RBP21.34■■□□□ 1.01
TRIM47-207ENST00000593089 BRD2P25440 801 aaKnown RBP21.34■■□□□ 1.01
TRIM47-207ENST00000593089 HLA-FP30511 346 aa21.34■■□□□ 1.01
TRIM47-207ENST00000593089 OXTRP30559 389 aa21.34■■□□□ 1.01
TRIM47-207ENST00000593089 ZNF445P59923 1031 aa21.34■■□□□ 1.01
TRIM47-207ENST00000593089 FAM193AP78312 1265 aa21.34■■□□□ 1.01
TRIM47-207ENST00000593089 FNDC3BQ53EP0 1204 aaKnown RBP21.34■■□□□ 1.01
TRIM47-207ENST00000593089 ADGRF1Q5T601 910 aa21.34■■□□□ 1.01
TRIM47-207ENST00000593089 DCAF12L1Q5VU92 463 aa21.34■■□□□ 1.01
TRIM47-207ENST00000593089 PMF1Q6P1K2 205 aa21.34■■□□□ 1.01
TRIM47-207ENST00000593089 CHST9Q7L1S5 443 aa21.34■■□□□ 1.01
TRIM47-207ENST00000593089 SCML4Q8N228 414 aa21.34■■□□□ 1.01
TRIM47-207ENST00000593089 ZCCHC9Q8N567 271 aaKnown RBP21.34■■□□□ 1.01
TRIM47-207ENST00000593089 CYB5D2Q8WUJ1 264 aa21.34■■□□□ 1.01
TRIM47-207ENST00000593089 KAT5Q92993 513 aa21.34■■□□□ 1.01
TRIM47-207ENST00000593089 DHTKD1Q96HY7 919 aaPredicted RBP21.34■■□□□ 1.01
TRIM47-207ENST00000593089 CEP63Q96MT8 703 aa21.34■■□□□ 1.01
TRIM47-207ENST00000593089 TMEM121BQ9BXQ6 578 aaPredicted RBP21.34■■□□□ 1.01
TRIM47-207ENST00000593089 ABCB8Q9NUT2 735 aa21.34■■□□□ 1.01
TRIM47-207ENST00000593089 STOML2Q9UJZ1 356 aa21.34■■□□□ 1.01
TRIM47-207ENST00000593089 MAN1B1Q9UKM7 699 aa21.34■■□□□ 1.01
TRIM47-207ENST00000593089 FRYQ5TBA9 3013 aa21.34■■□□□ 1.01
TRIM47-207ENST00000593089 GABBR2O75899 941 aa21.33■■□□□ 1.01
TRIM47-207ENST00000593089 LATS1O95835 1130 aa21.33■■□□□ 1.01
TRIM47-207ENST00000593089 SGSHP51688 502 aa21.33■■□□□ 1.01
TRIM47-207ENST00000593089 GRIK2Q13002 908 aa21.33■■□□□ 1.01
TRIM47-207ENST00000593089 KLHL10Q6JEL2 608 aa21.33■■□□□ 1.01
TRIM47-207ENST00000593089 FAM124AQ86V42 546 aa21.33■■□□□ 1.01
TRIM47-207ENST00000593089 ZNF366Q8N895 744 aa21.33■■□□□ 1.01
TRIM47-207ENST00000593089 CADM4Q8NFZ8 388 aa21.33■■□□□ 1.01
TRIM47-207ENST00000593089 WFIKKN2Q8TEU8 576 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms