RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 DGKEP52429 567 aa14.51□□□□□ -0.09
CLIP3-205ENST00000592017 JAM2P57087 298 aa14.51□□□□□ -0.09
CLIP3-205ENST00000592017 ARID5AQ03989 594 aa14.51□□□□□ -0.09
CLIP3-205ENST00000592017 PUM1Q14671 1186 aaKnown RBP eCLIP14.51□□□□□ -0.09
CLIP3-205ENST00000592017 TRIP4Q15650 581 aaPredicted RBP14.51□□□□□ -0.09
CLIP3-205ENST00000592017 CSRP2Q16527 193 aa14.51□□□□□ -0.09
CLIP3-205ENST00000592017 PLK5Q496M5 336 aa14.51□□□□□ -0.09
CLIP3-205ENST00000592017 PTPN20Q4JDL3 420 aa14.51□□□□□ -0.09
CLIP3-205ENST00000592017 ANO7Q6IWH7 933 aa14.51□□□□□ -0.09
CLIP3-205ENST00000592017 FAM183BPQ6ZVS7 135 aa14.51□□□□□ -0.09
CLIP3-205ENST00000592017 TAC4Q86UU9 113 aa14.51□□□□□ -0.09
CLIP3-205ENST00000592017 RASSF3Q86WH2 238 aa14.51□□□□□ -0.09
CLIP3-205ENST00000592017 DQX1Q8TE96 717 aaKnown RBP14.51□□□□□ -0.09
CLIP3-205ENST00000592017 SLC20A1Q8WUM9 679 aa14.51□□□□□ -0.09
CLIP3-205ENST00000592017 LOXL4Q96JB6 756 aa14.51□□□□□ -0.09
CLIP3-205ENST00000592017 ZC3H10Q96K80 434 aaKnown RBP14.51□□□□□ -0.09
CLIP3-205ENST00000592017 XPO6Q96QU8 1125 aaKnown RBP14.51□□□□□ -0.09
CLIP3-205ENST00000592017 TRIM62Q9BVG3 475 aa14.51□□□□□ -0.09
CLIP3-205ENST00000592017 WDR35Q9P2L0 1181 aa14.51□□□□□ -0.09
CLIP3-205ENST00000592017 DAAM1Q9Y4D1 1078 aa14.51□□□□□ -0.09
CLIP3-205ENST00000592017 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.51□□□□□ -0.09
CLIP3-205ENST00000592017 PRR5-ARHGAP8B1AHC4 643 aa14.5□□□□□ -0.09
CLIP3-205ENST00000592017 GOLGA6L19H0YKK7 550 aa14.5□□□□□ -0.09
CLIP3-205ENST00000592017 CACNG3O60359 315 aa14.5□□□□□ -0.09
CLIP3-205ENST00000592017 GRAP2O75791 330 aa14.5□□□□□ -0.09
CLIP3-205ENST00000592017 FYNP06241 537 aa14.5□□□□□ -0.09
CLIP3-205ENST00000592017 CISD3P0C7P0 127 aa14.5□□□□□ -0.09
CLIP3-205ENST00000592017 CHKAP35790 457 aa14.5□□□□□ -0.09
CLIP3-205ENST00000592017 TBX4P57082 545 aa14.5□□□□□ -0.09
CLIP3-205ENST00000592017 SNX16P57768 344 aa14.5□□□□□ -0.09
CLIP3-205ENST00000592017 ARHGAP8P85298 464 aa14.5□□□□□ -0.09
CLIP3-205ENST00000592017 TAF5Q15542 800 aa14.5□□□□□ -0.09
CLIP3-205ENST00000592017 CCDC6Q16204 474 aa14.5□□□□□ -0.09
CLIP3-205ENST00000592017 NAA35Q5VZE5 725 aa14.5□□□□□ -0.09
CLIP3-205ENST00000592017 GRAMD4Q6IC98 578 aa14.5□□□□□ -0.09
CLIP3-205ENST00000592017 TOGARAM2Q6ZUX3 1019 aa14.5□□□□□ -0.09
CLIP3-205ENST00000592017 ERMP1Q7Z2K6 904 aa14.5□□□□□ -0.09
CLIP3-205ENST00000592017 TERB1Q8NA31 727 aa14.5□□□□□ -0.09
CLIP3-205ENST00000592017 MDGA1Q8NFP4 955 aa14.5□□□□□ -0.09
CLIP3-205ENST00000592017 DDX1Q92499 740 aaKnown RBP14.5□□□□□ -0.09
CLIP3-205ENST00000592017 SERPINB11Q96P15 392 aa14.5□□□□□ -0.09
CLIP3-205ENST00000592017 TPSD1Q9BZJ3 242 aa14.5□□□□□ -0.09
CLIP3-205ENST00000592017 DUSP15Q9H1R2 295 aaPredicted RBP14.5□□□□□ -0.09
CLIP3-205ENST00000592017 ARRDC1-AS1Q9H2J1 176 aa14.5□□□□□ -0.09
CLIP3-205ENST00000592017 POPDC2Q9HBU9 364 aa14.5□□□□□ -0.09
CLIP3-205ENST00000592017 RTN4Q9NQC3 1192 aaKnown RBP14.5□□□□□ -0.09
CLIP3-205ENST00000592017 SYNJ2BP-COX16A0A087WUM0 186 aa14.49□□□□□ -0.09
CLIP3-205ENST00000592017 PRRT4C9JH25 899 aa14.49□□□□□ -0.09
CLIP3-205ENST00000592017 TSPAN3O60637 253 aa14.49□□□□□ -0.09
CLIP3-205ENST00000592017 EPN2O95208 641 aa14.49□□□□□ -0.09
CLIP3-205ENST00000592017 MOCS2O96007 188 aaPredicted RBP14.49□□□□□ -0.09
CLIP3-205ENST00000592017 CYBBP04839 570 aa14.49□□□□□ -0.09
CLIP3-205ENST00000592017 ATXN1P54253 815 aaKnown RBP14.49□□□□□ -0.09
CLIP3-205ENST00000592017 YWHAZP63104 245 aaKnown RBP14.49□□□□□ -0.09
CLIP3-205ENST00000592017 HSF5Q4G112 596 aaPredicted RBP14.49□□□□□ -0.09
CLIP3-205ENST00000592017 DCAF6Q58WW2 860 aa14.49□□□□□ -0.09
CLIP3-205ENST00000592017 EFHC1Q5JVL4 640 aa14.49□□□□□ -0.09
CLIP3-205ENST00000592017 EOGTQ5NDL2 527 aa14.49□□□□□ -0.09
CLIP3-205ENST00000592017 C10orf76Q5T2E6 689 aa14.49□□□□□ -0.09
CLIP3-205ENST00000592017 SYPL2Q5VXT5 272 aa14.49□□□□□ -0.09
CLIP3-205ENST00000592017 OLFML1Q6UWY5 402 aa14.49□□□□□ -0.09
CLIP3-205ENST00000592017 PRR23CQ6ZRP0 262 aa14.49□□□□□ -0.09
CLIP3-205ENST00000592017 DGLUCYQ7Z3D6 616 aa14.49□□□□□ -0.09
CLIP3-205ENST00000592017 KCNV2Q8TDN2 545 aa14.49□□□□□ -0.09
CLIP3-205ENST00000592017 DDI1Q8WTU0 396 aa14.49□□□□□ -0.09
CLIP3-205ENST00000592017 CPA5Q8WXQ8 436 aa14.49□□□□□ -0.09
CLIP3-205ENST00000592017 FAM204AQ9H8W3 233 aa14.49□□□□□ -0.09
CLIP3-205ENST00000592017 COX16Q9P0S2 106 aa14.49□□□□□ -0.09
CLIP3-205ENST00000592017 NOCTQ9UK39 431 aaKnown RBP14.49□□□□□ -0.09
CLIP3-205ENST00000592017 FBXO10Q9UK96 956 aa14.49□□□□□ -0.09
CLIP3-205ENST00000592017 STARD13Q9Y3M8 1113 aa14.49□□□□□ -0.09
CLIP3-205ENST00000592017 SPTBN2O15020 2390 aa14.49□□□□□ -0.09
CLIP3-205ENST00000592017 GDF9O60383 454 aa14.48□□□□□ -0.09
CLIP3-205ENST00000592017 HSF2BPO75031 334 aa14.48□□□□□ -0.09
CLIP3-205ENST00000592017 LSM8O95777 96 aaKnown RBP14.48□□□□□ -0.09
CLIP3-205ENST00000592017 BCKDHBP21953 392 aa14.48□□□□□ -0.09
CLIP3-205ENST00000592017 CDH5P33151 784 aaPredicted RBP14.48□□□□□ -0.09
CLIP3-205ENST00000592017 WASP42768 502 aa14.48□□□□□ -0.09
CLIP3-205ENST00000592017 SLC11A2P49281 568 aa14.48□□□□□ -0.09
CLIP3-205ENST00000592017 DGKGP49619 791 aa14.48□□□□□ -0.09
CLIP3-205ENST00000592017 NOMO3P69849 1222 aa14.48□□□□□ -0.09
CLIP3-205ENST00000592017 PITX1P78337 314 aaPredicted RBP14.48□□□□□ -0.09
CLIP3-205ENST00000592017 FOXK2Q01167 660 aa14.48□□□□□ -0.09
CLIP3-205ENST00000592017 CDR2Q01850 454 aa14.48□□□□□ -0.09
CLIP3-205ENST00000592017 SF3A2Q15428 464 aaKnown RBP14.48□□□□□ -0.09
CLIP3-205ENST00000592017 PREPLQ4J6C6 727 aaPredicted RBP14.48□□□□□ -0.09
CLIP3-205ENST00000592017 USP39Q53GS9 565 aaKnown RBP14.48□□□□□ -0.09
CLIP3-205ENST00000592017 C2CD6Q53TS8 623 aa14.48□□□□□ -0.09
CLIP3-205ENST00000592017 PLA2G2CQ5R387 149 aa14.48□□□□□ -0.09
CLIP3-205ENST00000592017 FYB2Q5VWT5 728 aa14.48□□□□□ -0.09
CLIP3-205ENST00000592017 EGFLAMQ63HQ2 1017 aa14.48□□□□□ -0.09
CLIP3-205ENST00000592017 NUGGCQ68CJ6 796 aa14.48□□□□□ -0.09
CLIP3-205ENST00000592017 ERICH1Q86X53 443 aa14.48□□□□□ -0.09
CLIP3-205ENST00000592017 ZNF677Q86XU0 584 aa14.48□□□□□ -0.09
CLIP3-205ENST00000592017 UNC45BQ8IWX7 931 aa14.48□□□□□ -0.09
CLIP3-205ENST00000592017 DEFB106AQ8N104 65 aa14.48□□□□□ -0.09
CLIP3-205ENST00000592017 CPXM2Q8N436 756 aa14.48□□□□□ -0.09
CLIP3-205ENST00000592017 ZNF513Q8N8E2 541 aaPredicted RBP14.48□□□□□ -0.09
CLIP3-205ENST00000592017 MSANTD4Q8NCY6 345 aa14.48□□□□□ -0.09
CLIP3-205ENST00000592017 OLIG1Q8TAK6 271 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms