RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 NIPA2Q8N8Q9 360 aa17.29■□□□□ 0.36
GCDH-213ENST00000590627 LRRC57Q8N9N7 239 aa17.29■□□□□ 0.36
GCDH-213ENST00000590627 RXFP2Q8WXD0 754 aa17.29■□□□□ 0.36
GCDH-213ENST00000590627 E2F7Q96AV8 911 aa17.29■□□□□ 0.36
GCDH-213ENST00000590627 CNPY3Q9BT09 278 aa17.29■□□□□ 0.36
GCDH-213ENST00000590627 EPC1Q9H2F5 836 aa17.29■□□□□ 0.36
GCDH-213ENST00000590627 ZNF334Q9HCZ1 680 aaPredicted RBP17.29■□□□□ 0.36
GCDH-213ENST00000590627 OSER1Q9NX31 292 aa17.29■□□□□ 0.36
GCDH-213ENST00000590627 DLL3Q9NYJ7 618 aa17.29■□□□□ 0.36
GCDH-213ENST00000590627 RRN3Q9NYV6 651 aa17.29■□□□□ 0.36
GCDH-213ENST00000590627 TRPM5Q9NZQ8 1165 aa17.29■□□□□ 0.36
GCDH-213ENST00000590627 GRID2IPA4D2P6 1211 aa17.28■□□□□ 0.36
GCDH-213ENST00000590627 BUB1O43683 1085 aa17.28■□□□□ 0.36
GCDH-213ENST00000590627 BUB1BO60566 1050 aaPredicted RBP17.28■□□□□ 0.36
GCDH-213ENST00000590627 TADA3O75528 432 aa17.28■□□□□ 0.36
GCDH-213ENST00000590627 PROSCO94903 275 aa17.28■□□□□ 0.36
GCDH-213ENST00000590627 MOCS3O95396 460 aa17.28■□□□□ 0.36
GCDH-213ENST00000590627 MYL4P12829 197 aa17.28■□□□□ 0.36
GCDH-213ENST00000590627 GDI1P31150 447 aa17.28■□□□□ 0.36
GCDH-213ENST00000590627 MAN1A1P33908 653 aa17.28■□□□□ 0.36
GCDH-213ENST00000590627 TUBP50607 506 aa17.28■□□□□ 0.36
GCDH-213ENST00000590627 MLLT6P55198 1093 aaPredicted RBP17.28■□□□□ 0.36
GCDH-213ENST00000590627 NAP1L1P55209 391 aaKnown RBP17.28■□□□□ 0.36
GCDH-213ENST00000590627 ZNF252P-AS1Q0IIN9 211 aa17.28■□□□□ 0.36
GCDH-213ENST00000590627 PIGHQ14442 188 aaPredicted RBP17.28■□□□□ 0.36
GCDH-213ENST00000590627 SLC25A52Q3SY17 297 aa17.28■□□□□ 0.36
GCDH-213ENST00000590627 CCDC14Q49A88 953 aa17.28■□□□□ 0.36
GCDH-213ENST00000590627 SYPL2Q5VXT5 272 aa17.28■□□□□ 0.36
GCDH-213ENST00000590627 BTBD8Q5XKL5 378 aa17.28■□□□□ 0.36
GCDH-213ENST00000590627 VITQ6UXI7 678 aa17.28■□□□□ 0.36
GCDH-213ENST00000590627 DGLUCYQ7Z3D6 616 aa17.28■□□□□ 0.36
GCDH-213ENST00000590627 BNIPLQ7Z465 357 aa17.28■□□□□ 0.36
GCDH-213ENST00000590627 SLFN11Q7Z7L1 901 aa17.28■□□□□ 0.36
GCDH-213ENST00000590627 MFSD6LQ8IWD5 586 aa17.28■□□□□ 0.36
GCDH-213ENST00000590627 UBE2Q2Q8WVN8 375 aa17.28■□□□□ 0.36
GCDH-213ENST00000590627 CENPIQ92674 756 aaPredicted RBP17.28■□□□□ 0.36
GCDH-213ENST00000590627 ZSWIM3Q96MP5 696 aa17.28■□□□□ 0.36
GCDH-213ENST00000590627 CDK5RAP1Q96SZ6 601 aaKnown RBP17.28■□□□□ 0.36
GCDH-213ENST00000590627 CHRDQ9H2X0 955 aa17.28■□□□□ 0.36
GCDH-213ENST00000590627 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.28■□□□□ 0.36
GCDH-213ENST00000590627 TMEM51Q9NW97 253 aa17.28■□□□□ 0.36
GCDH-213ENST00000590627 NCDNQ9UBB6 729 aa17.28■□□□□ 0.36
GCDH-213ENST00000590627 NAALADL1Q9UQQ1 740 aa17.28■□□□□ 0.36
GCDH-213ENST00000590627 TICRRQ7Z2Z1 1910 aa17.27■□□□□ 0.36
GCDH-213ENST00000590627 NRG2O14511 850 aaPredicted RBP17.27■□□□□ 0.36
GCDH-213ENST00000590627 CAPN9O14815 690 aa17.27■□□□□ 0.36
GCDH-213ENST00000590627 KIF5CO60282 957 aa17.27■□□□□ 0.36
GCDH-213ENST00000590627 RALAP11233 206 aa17.27■□□□□ 0.36
GCDH-213ENST00000590627 NCAM1P13591 858 aa17.27■□□□□ 0.36
GCDH-213ENST00000590627 PSMA2P25787 234 aa17.27■□□□□ 0.36
GCDH-213ENST00000590627 CDC25CP30307 473 aa17.27■□□□□ 0.36
GCDH-213ENST00000590627 SDC4P31431 198 aa17.27■□□□□ 0.36
GCDH-213ENST00000590627 MTAPQ13126 283 aa17.27■□□□□ 0.36
GCDH-213ENST00000590627 PPP2R5DQ14738 602 aa17.27■□□□□ 0.36
GCDH-213ENST00000590627 DCAF6Q58WW2 860 aa17.27■□□□□ 0.36
GCDH-213ENST00000590627 MSANTD2Q6P1R3 559 aa17.27■□□□□ 0.36
GCDH-213ENST00000590627 KLHDC10Q6PID8 442 aa17.27■□□□□ 0.36
GCDH-213ENST00000590627 TRIM58Q8NG06 486 aa17.27■□□□□ 0.36
GCDH-213ENST00000590627 ZSCAN18Q8TBC5 510 aaPredicted RBP17.27■□□□□ 0.36
GCDH-213ENST00000590627 PGAP3Q96FM1 320 aaPredicted RBP17.27■□□□□ 0.36
GCDH-213ENST00000590627 MSANTD3Q96H12 275 aa17.27■□□□□ 0.36
GCDH-213ENST00000590627 BTBD6Q96KE9 485 aa17.27■□□□□ 0.36
GCDH-213ENST00000590627 NPY6RQ99463 290 aa17.27■□□□□ 0.36
GCDH-213ENST00000590627 IRX2Q9BZI1 471 aaPredicted RBP17.27■□□□□ 0.36
GCDH-213ENST00000590627 STAP1Q9ULZ2 295 aa17.27■□□□□ 0.36
GCDH-213ENST00000590627 NDRG2Q9UN36 371 aaKnown RBP17.27■□□□□ 0.36
GCDH-213ENST00000590627 CAPN6Q9Y6Q1 641 aa17.27■□□□□ 0.36
GCDH-213ENST00000590627 ZNF638Q14966 1978 aaKnown RBP17.26■□□□□ 0.35
GCDH-213ENST00000590627 SOBPA7XYQ1 873 aa17.26■□□□□ 0.35
GCDH-213ENST00000590627 PALMO75781 387 aa17.26■□□□□ 0.35
GCDH-213ENST00000590627 ENDOD1O94919 500 aa17.26■□□□□ 0.35
GCDH-213ENST00000590627 IGLV3-25P01717 112 aa17.26■□□□□ 0.35
GCDH-213ENST00000590627 RARGP13631 454 aa17.26■□□□□ 0.35
GCDH-213ENST00000590627 MSNP26038 577 aaKnown RBP17.26■□□□□ 0.35
GCDH-213ENST00000590627 VIPR2P41587 438 aa17.26■□□□□ 0.35
GCDH-213ENST00000590627 SLC1A1P43005 524 aa17.26■□□□□ 0.35
GCDH-213ENST00000590627 NRLP54845 237 aa17.26■□□□□ 0.35
GCDH-213ENST00000590627 MESDQ14696 234 aa17.26■□□□□ 0.35
GCDH-213ENST00000590627 TEAD2Q15562 447 aa17.26■□□□□ 0.35
GCDH-213ENST00000590627 C1orf228Q6PIY5 440 aa17.26■□□□□ 0.35
GCDH-213ENST00000590627 NYAP1Q6ZVC0 841 aa17.26■□□□□ 0.35
GCDH-213ENST00000590627 GAREM2Q75VX8 874 aa17.26■□□□□ 0.35
GCDH-213ENST00000590627 STRADAQ7RTN6 431 aa17.26■□□□□ 0.35
GCDH-213ENST00000590627 TADA2BQ86TJ2 420 aa17.26■□□□□ 0.35
GCDH-213ENST00000590627 SYCE1Q8N0S2 351 aa17.26■□□□□ 0.35
GCDH-213ENST00000590627 SHKBP1Q8TBC3 707 aa17.26■□□□□ 0.35
GCDH-213ENST00000590627 FAM3CQ92520 227 aa17.26■□□□□ 0.35
GCDH-213ENST00000590627 EDEM1Q92611 657 aa17.26■□□□□ 0.35
GCDH-213ENST00000590627 CFAP57Q96MR6 1250 aa17.26■□□□□ 0.35
GCDH-213ENST00000590627 ALS2CR12Q96Q35 445 aa17.26■□□□□ 0.35
GCDH-213ENST00000590627 NCAPGQ9BPX3 1015 aa17.26■□□□□ 0.35
GCDH-213ENST00000590627 OLA1Q9NTK5 396 aaKnown RBP17.26■□□□□ 0.35
GCDH-213ENST00000590627 SMG5Q9UPR3 1016 aaKnown RBP17.26■□□□□ 0.35
GCDH-213ENST00000590627 PIAS3Q9Y6X2 628 aa17.26■□□□□ 0.35
GCDH-213ENST00000590627 ARNTLO00327 626 aa17.25■□□□□ 0.35
GCDH-213ENST00000590627 TLR5O60602 858 aa17.25■□□□□ 0.35
GCDH-213ENST00000590627 GJA1P17302 382 aa17.25■□□□□ 0.35
GCDH-213ENST00000590627 DESP17661 470 aa17.25■□□□□ 0.35
GCDH-213ENST00000590627 PFKLP17858 780 aa17.25■□□□□ 0.35
GCDH-213ENST00000590627 SDHBP21912 280 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms