RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 RNF43Q68DV7 783 aa22.23■■□□□ 1.15
LRP3-202ENST00000590275 LAIR1Q6GTX8 287 aa22.23■■□□□ 1.15
LRP3-202ENST00000590275 BEND5Q7L4P6 421 aa22.23■■□□□ 1.15
LRP3-202ENST00000590275 CCDC26Q8TAB7 109 aa22.23■■□□□ 1.15
LRP3-202ENST00000590275 OLIG1Q8TAK6 271 aa22.23■■□□□ 1.15
LRP3-202ENST00000590275 DDI1Q8WTU0 396 aa22.23■■□□□ 1.15
LRP3-202ENST00000590275 SLC20A1Q8WUM9 679 aa22.23■■□□□ 1.15
LRP3-202ENST00000590275 SORCS1Q8WY21 1168 aa22.23■■□□□ 1.15
LRP3-202ENST00000590275 SLC2A13Q96QE2 648 aa22.23■■□□□ 1.15
LRP3-202ENST00000590275 FUCA2Q9BTY2 467 aa22.23■■□□□ 1.15
LRP3-202ENST00000590275 STK33Q9BYT3 514 aa22.23■■□□□ 1.15
LRP3-202ENST00000590275 FAM207AQ9NSI2 230 aaPredicted RBP22.23■■□□□ 1.15
LRP3-202ENST00000590275 CACNA2D2Q9NY47 1150 aa22.23■■□□□ 1.15
LRP3-202ENST00000590275 RAD54BQ9Y620 910 aa22.23■■□□□ 1.15
LRP3-202ENST00000590275 EML5Q05BV3 1969 aa22.23■■□□□ 1.15
LRP3-202ENST00000590275 LRRC10BA6NIK2 292 aa22.22■■□□□ 1.15
LRP3-202ENST00000590275 ACSL4O60488 711 aa22.22■■□□□ 1.15
LRP3-202ENST00000590275 CDH5P33151 784 aaPredicted RBP22.22■■□□□ 1.15
LRP3-202ENST00000590275 JAM2P57087 298 aa22.22■■□□□ 1.15
LRP3-202ENST00000590275 YWHAZP63104 245 aaKnown RBP22.22■■□□□ 1.15
LRP3-202ENST00000590275 SPEM2Q0P670 501 aa22.22■■□□□ 1.15
LRP3-202ENST00000590275 HSF5Q4G112 596 aaPredicted RBP22.22■■□□□ 1.15
LRP3-202ENST00000590275 C2CD6Q53TS8 623 aa22.22■■□□□ 1.15
LRP3-202ENST00000590275 PIK3R6Q5UE93 754 aa22.22■■□□□ 1.15
LRP3-202ENST00000590275 OTUD1Q5VV17 481 aaPredicted RBP22.22■■□□□ 1.15
LRP3-202ENST00000590275 SMYD5Q6GMV2 418 aa22.22■■□□□ 1.15
LRP3-202ENST00000590275 CEP68Q76N32 757 aa22.22■■□□□ 1.15
LRP3-202ENST00000590275 DHX40Q8IX18 779 aaKnown RBP22.22■■□□□ 1.15
LRP3-202ENST00000590275 DEFB106AQ8N104 65 aa22.22■■□□□ 1.15
LRP3-202ENST00000590275 RLN3Q8WXF3 142 aa22.22■■□□□ 1.15
LRP3-202ENST00000590275 NUCKS1Q9H1E3 243 aaKnown RBP22.22■■□□□ 1.15
LRP3-202ENST00000590275 DUSP15Q9H1R2 295 aaPredicted RBP22.22■■□□□ 1.15
LRP3-202ENST00000590275 POPDC2Q9HBU9 364 aa22.22■■□□□ 1.15
LRP3-202ENST00000590275 LGALS16A8MUM7 142 aa22.21■■□□□ 1.15
LRP3-202ENST00000590275 IRAK2O43187 625 aa22.21■■□□□ 1.15
LRP3-202ENST00000590275 LATS1O95835 1130 aa22.21■■□□□ 1.15
LRP3-202ENST00000590275 MMEP08473 750 aa22.21■■□□□ 1.15
LRP3-202ENST00000590275 CHRNB2P17787 502 aa22.21■■□□□ 1.15
LRP3-202ENST00000590275 HLA-FP30511 346 aa22.21■■□□□ 1.15
LRP3-202ENST00000590275 NTSR1P30989 418 aa22.21■■□□□ 1.15
LRP3-202ENST00000590275 KRT9P35527 623 aa22.21■■□□□ 1.15
LRP3-202ENST00000590275 POLR2FP61218 127 aaKnown RBP22.21■■□□□ 1.15
LRP3-202ENST00000590275 SYCP1Q15431 976 aa22.21■■□□□ 1.15
LRP3-202ENST00000590275 CCDC6Q16204 474 aa22.21■■□□□ 1.15
LRP3-202ENST00000590275 PLK5Q496M5 336 aa22.21■■□□□ 1.15
LRP3-202ENST00000590275 MPPE1Q53F39 396 aa22.21■■□□□ 1.15
LRP3-202ENST00000590275 ZC3H12AQ5D1E8 599 aaKnown RBP22.21■■□□□ 1.15
LRP3-202ENST00000590275 EOGTQ5NDL2 527 aa22.21■■□□□ 1.15
LRP3-202ENST00000590275 KCNV2Q8TDN2 545 aa22.21■■□□□ 1.15
LRP3-202ENST00000590275 EPS8L1Q8TE68 723 aa22.21■■□□□ 1.15
LRP3-202ENST00000590275 GOLGA1Q92805 767 aa22.21■■□□□ 1.15
LRP3-202ENST00000590275 LMLNQ96KR4 655 aa22.21■■□□□ 1.15
LRP3-202ENST00000590275 GABRG3Q99928 467 aa22.21■■□□□ 1.15
LRP3-202ENST00000590275 SLC6A17Q9H1V8 727 aa22.21■■□□□ 1.15
LRP3-202ENST00000590275 NLRC4Q9NPP4 1024 aa22.21■■□□□ 1.15
LRP3-202ENST00000590275 NOCTQ9UK39 431 aaKnown RBP22.21■■□□□ 1.15
LRP3-202ENST00000590275 TLR6Q9Y2C9 796 aa22.21■■□□□ 1.15
LRP3-202ENST00000590275 TCRBV21S2A2A0A5A6 115 aa22.2■■□□□ 1.14
LRP3-202ENST00000590275 SART1O43290 800 aaKnown RBP22.2■■□□□ 1.14
LRP3-202ENST00000590275 GFPT2O94808 682 aa22.2■■□□□ 1.14
LRP3-202ENST00000590275 TRUB2O95900 331 aaKnown RBP22.2■■□□□ 1.14
LRP3-202ENST00000590275 RETP07949 1114 aa22.2■■□□□ 1.14
LRP3-202ENST00000590275 GABRG2P18507 467 aa22.2■■□□□ 1.14
LRP3-202ENST00000590275 TFE3P19532 575 aaPredicted RBP22.2■■□□□ 1.14
LRP3-202ENST00000590275 OR6B2Q6IFH4 312 aa22.2■■□□□ 1.14
LRP3-202ENST00000590275 HMGB4Q8WW32 186 aa22.2■■□□□ 1.14
LRP3-202ENST00000590275 TMA16Q96EY4 203 aaKnown RBP22.2■■□□□ 1.14
LRP3-202ENST00000590275 ZC3H10Q96K80 434 aaKnown RBP22.2■■□□□ 1.14
LRP3-202ENST00000590275 CD93Q9NPY3 652 aa22.2■■□□□ 1.14
LRP3-202ENST00000590275 MBD1Q9UIS9 605 aaPredicted RBP22.2■■□□□ 1.14
LRP3-202ENST00000590275 MOCS2O96007 188 aaPredicted RBP22.19■■□□□ 1.14
LRP3-202ENST00000590275 CYBBP04839 570 aa22.19■■□□□ 1.14
LRP3-202ENST00000590275 HOXB2P14652 356 aa22.19■■□□□ 1.14
LRP3-202ENST00000590275 IL12RB1P42701 662 aa22.19■■□□□ 1.14
LRP3-202ENST00000590275 RPS24P62847 133 aaKnown RBP22.19■■□□□ 1.14
LRP3-202ENST00000590275 NNTQ13423 1086 aa22.19■■□□□ 1.14
LRP3-202ENST00000590275 PREPLQ4J6C6 727 aaPredicted RBP22.19■■□□□ 1.14
LRP3-202ENST00000590275 DCAF6Q58WW2 860 aa22.19■■□□□ 1.14
LRP3-202ENST00000590275 NUGGCQ68CJ6 796 aa22.19■■□□□ 1.14
LRP3-202ENST00000590275 TRNP1Q6NT89 227 aa22.19■■□□□ 1.14
LRP3-202ENST00000590275 CACNA2D4Q7Z3S7 1137 aa22.19■■□□□ 1.14
LRP3-202ENST00000590275 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.19■■□□□ 1.14
LRP3-202ENST00000590275 KIAA0907Q7Z7F0 614 aaPredicted RBP22.19■■□□□ 1.14
LRP3-202ENST00000590275 CHPFQ8IZ52 775 aa22.19■■□□□ 1.14
LRP3-202ENST00000590275 AZIN2Q96A70 460 aa22.19■■□□□ 1.14
LRP3-202ENST00000590275 SERPINB11Q96P15 392 aa22.19■■□□□ 1.14
LRP3-202ENST00000590275 SMOC1Q9H4F8 434 aa22.19■■□□□ 1.14
LRP3-202ENST00000590275 RAB23Q9ULC3 237 aa22.19■■□□□ 1.14
LRP3-202ENST00000590275 CAPN9O14815 690 aa22.18■■□□□ 1.14
LRP3-202ENST00000590275 TEX33O43247 280 aa22.18■■□□□ 1.14
LRP3-202ENST00000590275 TBL1XO60907 577 aa22.18■■□□□ 1.14
LRP3-202ENST00000590275 BPIFB4P59827 614 aa22.18■■□□□ 1.14
LRP3-202ENST00000590275 SLC6A3Q01959 620 aa22.18■■□□□ 1.14
LRP3-202ENST00000590275 ENPP2Q13822 863 aa22.18■■□□□ 1.14
LRP3-202ENST00000590275 MAP7D1Q3KQU3 841 aa22.18■■□□□ 1.14
LRP3-202ENST00000590275 ADIPOR2Q86V24 386 aa22.18■■□□□ 1.14
LRP3-202ENST00000590275 UNC45BQ8IWX7 931 aa22.18■■□□□ 1.14
LRP3-202ENST00000590275 CFAP52Q8N1V2 620 aa22.18■■□□□ 1.14
LRP3-202ENST00000590275 IPO4Q8TEX9 1081 aaKnown RBP22.18■■□□□ 1.14
LRP3-202ENST00000590275 RMDN1Q96DB5 314 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms