RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 PLD5Q8N7P1 536 aa15□□□□□ -0.01
RETREG3-208ENST00000589797 RAB6CQ9H0N0 254 aa15□□□□□ -0.01
RETREG3-208ENST00000589797 MPP6Q9NZW5 540 aa15□□□□□ -0.01
RETREG3-208ENST00000589797 TRDMT1O14717 391 aaKnown RBP15□□□□□ -0.01
RETREG3-208ENST00000589797 PIRTP0C851 137 aa15□□□□□ -0.01
RETREG3-208ENST00000589797 GPD2P43304 727 aa15□□□□□ -0.01
RETREG3-208ENST00000589797 MAXP61244 160 aa15□□□□□ -0.01
RETREG3-208ENST00000589797 STX1BP61266 288 aa15□□□□□ -0.01
RETREG3-208ENST00000589797 PDCD2Q16342 344 aaPredicted RBP15□□□□□ -0.01
RETREG3-208ENST00000589797 SPATA6LQ8N4H0 392 aa15□□□□□ -0.01
RETREG3-208ENST00000589797 POU5F2Q8N7G0 328 aa15□□□□□ -0.01
RETREG3-208ENST00000589797 PPHLN1Q8NEY8 458 aaKnown RBP15□□□□□ -0.01
RETREG3-208ENST00000589797 CPT1BQ92523 772 aa15□□□□□ -0.01
RETREG3-208ENST00000589797 LTBP4Q8N2S1 1624 aa15□□□□□ -0.01
RETREG3-208ENST00000589797 TCRBV9S1A1TA0A576 114 aa15□□□□□ -0.01
RETREG3-208ENST00000589797 C2orf71A6NGG8 1288 aa15□□□□□ -0.01
RETREG3-208ENST00000589797 MDM4O15151 490 aa15□□□□□ -0.01
RETREG3-208ENST00000589797 PHGDHO43175 533 aaKnown RBP15□□□□□ -0.01
RETREG3-208ENST00000589797 IQCF3P0C7M6 154 aa15□□□□□ -0.01
RETREG3-208ENST00000589797 CCDC185Q8N715 623 aa15□□□□□ -0.01
RETREG3-208ENST00000589797 SHCBP1Q8NEM2 672 aa15□□□□□ -0.01
RETREG3-208ENST00000589797 PRCCQ92733 491 aaPredicted RBP15□□□□□ -0.01
RETREG3-208ENST00000589797 UPF1Q92900 1129 aaKnown RBP eCLIP15□□□□□ -0.011e-8■■■■■ 41.7
RETREG3-208ENST00000589797 ZBED3Q96IU2 234 aaPredicted RBP15□□□□□ -0.01
RETREG3-208ENST00000589797 MAGEB5Q9BZ81 275 aa15□□□□□ -0.01
RETREG3-208ENST00000589797 SLC17A7Q9P2U7 560 aa15□□□□□ -0.01
RETREG3-208ENST00000589797 NAV1Q8NEY1 1877 aa15□□□□□ -0.01
RETREG3-208ENST00000589797 TCRBV7S3A2A0A539 114 aa14.99□□□□□ -0.01
RETREG3-208ENST00000589797 ENO3P13929 434 aaPredicted RBP14.99□□□□□ -0.01
RETREG3-208ENST00000589797 NOS2P35228 1153 aa14.99□□□□□ -0.01
RETREG3-208ENST00000589797 PBX3P40426 434 aa14.99□□□□□ -0.01
RETREG3-208ENST00000589797 SERPINB4P48594 390 aa14.99□□□□□ -0.01
RETREG3-208ENST00000589797 MRPS6P82932 125 aaKnown RBP14.99□□□□□ -0.01
RETREG3-208ENST00000589797 RBBP5Q15291 538 aaKnown RBP14.99□□□□□ -0.01
RETREG3-208ENST00000589797 OLFML2BQ68BL8 750 aa14.99□□□□□ -0.01
RETREG3-208ENST00000589797 RGS9BPQ6ZS82 235 aa14.99□□□□□ -0.01
RETREG3-208ENST00000589797 DDIASQ8IXT1 998 aa14.99□□□□□ -0.01
RETREG3-208ENST00000589797 ATAD1Q8NBU5 361 aa14.99□□□□□ -0.01
RETREG3-208ENST00000589797 CATSPERBQ9H7T0 1116 aa14.99□□□□□ -0.01
RETREG3-208ENST00000589797 ZDHHC18Q9NUE0 388 aa14.99□□□□□ -0.01
RETREG3-208ENST00000589797 SLC24A2Q9UI40 661 aa14.99□□□□□ -0.01
RETREG3-208ENST00000589797 PADI3Q9ULW8 664 aa14.99□□□□□ -0.01
RETREG3-208ENST00000589797 MYH7BA7E2Y1 1941 aa14.99□□□□□ -0.01
RETREG3-208ENST00000589797 TNRC6CQ9HCJ0 1690 aaKnown RBP14.99□□□□□ -0.01
RETREG3-208ENST00000589797 SPAG6O75602 509 aa14.99□□□□□ -0.01
RETREG3-208ENST00000589797 SNAI1O95863 264 aaPredicted RBP14.99□□□□□ -0.01
RETREG3-208ENST00000589797 ASGR1P07306 291 aa14.99□□□□□ -0.01
RETREG3-208ENST00000589797 PAPOLAP51003 745 aaKnown RBP14.99□□□□□ -0.01
RETREG3-208ENST00000589797 DBN1Q16643 649 aa14.99□□□□□ -0.01
RETREG3-208ENST00000589797 RABGAP1LQ5R372 815 aa14.99□□□□□ -0.01
RETREG3-208ENST00000589797 N4BP2L1Q5TBK1 243 aaPredicted RBP14.99□□□□□ -0.01
RETREG3-208ENST00000589797 ERLEC1Q96DZ1 483 aa14.99□□□□□ -0.01
RETREG3-208ENST00000589797 HACD3Q9P035 362 aa14.99□□□□□ -0.01
RETREG3-208ENST00000589797 TMEM59LQ9UK28 342 aa14.99□□□□□ -0.01
RETREG3-208ENST00000589797 DNAJC16Q9Y2G8 782 aa14.99□□□□□ -0.01
RETREG3-208ENST00000589797 E5RI56 91 aa14.99□□□□□ -0.01
RETREG3-208ENST00000589797 SNX3O60493 162 aa14.99□□□□□ -0.01
RETREG3-208ENST00000589797 F9P00740 461 aa14.99□□□□□ -0.01
RETREG3-208ENST00000589797 ALDH2P05091 517 aa14.99□□□□□ -0.01
RETREG3-208ENST00000589797 ITGAVP06756 1048 aa14.99□□□□□ -0.01
RETREG3-208ENST00000589797 SERPINB3P29508 390 aa14.99□□□□□ -0.01
RETREG3-208ENST00000589797 NAPEPLDQ6IQ20 393 aa14.99□□□□□ -0.01
RETREG3-208ENST00000589797 EIF1ADQ8N9N8 165 aaKnown RBP14.99□□□□□ -0.01
RETREG3-208ENST00000589797 SMARCD1Q96GM5 515 aa14.99□□□□□ -0.01
RETREG3-208ENST00000589797 PTPRHQ9HD43 1115 aa14.99□□□□□ -0.01
RETREG3-208ENST00000589797 DRG1Q9Y295 367 aaKnown RBP14.99□□□□□ -0.01
RETREG3-208ENST00000589797 ANKRD36CQ5JPF3 1778 aa14.99□□□□□ -0.01
RETREG3-208ENST00000589797 CRYBB1P53674 252 aaPredicted RBP14.98□□□□□ -0.01
RETREG3-208ENST00000589797 TARBP2Q15633 366 aaKnown RBP14.98□□□□□ -0.01
RETREG3-208ENST00000589797 SOWAHAQ2M3V2 549 aa14.98□□□□□ -0.01
RETREG3-208ENST00000589797 TTC30AQ86WT1 665 aa14.98□□□□□ -0.01
RETREG3-208ENST00000589797 PIK3R5Q8WYR1 880 aa14.98□□□□□ -0.01
RETREG3-208ENST00000589797 NDFIP2Q9NV92 336 aa14.98□□□□□ -0.01
RETREG3-208ENST00000589797 TBKBP1A7MCY6 615 aa14.98□□□□□ -0.01
RETREG3-208ENST00000589797 E9PBE3 544 aa14.98□□□□□ -0.01
RETREG3-208ENST00000589797 PFDN6O15212 129 aa14.98□□□□□ -0.01
RETREG3-208ENST00000589797 KLHL41O60662 606 aa14.98□□□□□ -0.01
RETREG3-208ENST00000589797 DRD4P21917 467 aa14.98□□□□□ -0.01
RETREG3-208ENST00000589797 GRIA1P42261 906 aa14.98□□□□□ -0.01
RETREG3-208ENST00000589797 SCNN1BP51168 640 aa14.98□□□□□ -0.01
RETREG3-208ENST00000589797 SLC45A4Q5BKX6 768 aa14.98□□□□□ -0.01
RETREG3-208ENST00000589797 UNC93AQ86WB7 457 aa14.98□□□□□ -0.01
RETREG3-208ENST00000589797 IFNEQ86WN2 208 aa14.98□□□□□ -0.01
RETREG3-208ENST00000589797 PCSK9Q8NBP7 692 aaKnown RBP14.98□□□□□ -0.01
RETREG3-208ENST00000589797 SH3TC2Q8TF17 1288 aa14.98□□□□□ -0.01
RETREG3-208ENST00000589797 MYLPFQ96A32 169 aa14.98□□□□□ -0.01
RETREG3-208ENST00000589797 TMA16Q96EY4 203 aaKnown RBP14.98□□□□□ -0.01
RETREG3-208ENST00000589797 ZMAT2Q96NC0 199 aaKnown RBP14.98□□□□□ -0.01
RETREG3-208ENST00000589797 LHX5Q9H2C1 402 aa14.98□□□□□ -0.01
RETREG3-208ENST00000589797 DMAP1Q9NPF5 467 aaPredicted RBP14.98□□□□□ -0.01
RETREG3-208ENST00000589797 A8MX80 341 aa14.98□□□□□ -0.01
RETREG3-208ENST00000589797 CCR1P32246 355 aa14.98□□□□□ -0.01
RETREG3-208ENST00000589797 FDFT1P37268 417 aa14.98□□□□□ -0.01
RETREG3-208ENST00000589797 SERPINB9P50453 376 aa14.98□□□□□ -0.01
RETREG3-208ENST00000589797 MPP3Q13368 585 aa14.98□□□□□ -0.01
RETREG3-208ENST00000589797 ZDHHC14Q8IZN3 488 aa14.98□□□□□ -0.01
RETREG3-208ENST00000589797 TNS4Q8IZW8 715 aa14.98□□□□□ -0.01
RETREG3-208ENST00000589797 ASIC4Q96FT7 647 aa14.98□□□□□ -0.01
RETREG3-208ENST00000589797 VCX3BQ9H321 246 aa14.98□□□□□ -0.01
RETREG3-208ENST00000589797 NOD2Q9HC29 1040 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms