RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 SEMA5AQ13591 1074 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 DPYSQ14117 519 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 SKIDA1Q1XH10 827 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 PARP6Q2NL67 630 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 PLEKHG4Q58EX7 1191 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 LGSNQ5TDP6 509 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 OTUD1Q5VV17 481 aaPredicted RBP10.74□□□□□ -0.69
VPS25-203ENST00000589520 SYPL2Q5VXT5 272 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 BSPRYQ5W0U4 402 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 C3orf62Q6ZUJ4 267 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 RFX8Q6ZV50 586 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 LZTR1Q8N653 840 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 C2orf15Q8WU43 125 aaKnown RBP10.74□□□□□ -0.69
VPS25-203ENST00000589520 MAML1Q92585 1016 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 CEP295NLQ96MC4 621 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 SPATA13Q96N96 652 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 HAPLN3Q96S86 360 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 CCT8L2Q96SF2 557 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 SELENOSQ9BQE4 189 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 PAAF1Q9BRP4 392 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 OSBPL7Q9BZF2 842 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 NSRP1Q9H0G5 558 aaKnown RBP10.74□□□□□ -0.69
VPS25-203ENST00000589520 ACSS3Q9H6R3 686 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 WDR6Q9NNW5 1121 aaKnown RBP10.74□□□□□ -0.69
VPS25-203ENST00000589520 TBC1D13Q9NVG8 400 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 DNAJC17Q9NVM6 304 aaKnown RBP10.74□□□□□ -0.69
VPS25-203ENST00000589520 NKIRAS1Q9NYS0 192 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.74□□□□□ -0.69
VPS25-203ENST00000589520 FNIP2Q9P278 1114 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 PSMC3IPQ9P2W1 217 aaPredicted RBP10.74□□□□□ -0.69
VPS25-203ENST00000589520 LRFN2Q9ULH4 789 aa10.74□□□□□ -0.69
VPS25-203ENST00000589520 IQANK1A0A1B0GTG1 560 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 ERI2A8K979 691 aaKnown RBP10.73□□□□□ -0.69
VPS25-203ENST00000589520 DCDC2CA8MYV0 355 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 H7C4K7 107 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 DCLK1O15075 740 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 PSMD3O43242 534 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 CREB3O43889 395 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 SLC2A3P11169 496 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 GRIK1P39086 918 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 MSH2P43246 934 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 OR1G1P47890 313 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 PSEN1P49768 467 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 ATXN1P54253 815 aaKnown RBP10.73□□□□□ -0.69
VPS25-203ENST00000589520 TPI1P60174 286 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 GBE1Q04446 702 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 SLC10A2Q12908 348 aaPredicted RBP10.73□□□□□ -0.69
VPS25-203ENST00000589520 SEMA3BQ13214 749 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 MRPL58Q14197 206 aaKnown RBP10.73□□□□□ -0.69
VPS25-203ENST00000589520 MBTPS1Q14703 1052 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 PPP2R5DQ14738 602 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 PRKD1Q15139 912 aaPredicted RBP10.73□□□□□ -0.69
VPS25-203ENST00000589520 BBS9Q3SYG4 887 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 CLLU1OSQ5K130 101 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 FNBP1LQ5T0N5 605 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 ANKRD22Q5VYY1 191 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 BTBD8Q5XKL5 378 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 ADGRD1Q6QNK2 874 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 MON1AQ86VX9 555 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 LRRC49Q8IUZ0 686 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 FAM126BQ8IXS8 530 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 CCDC13Q8IYE1 715 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 FBXO36Q8NEA4 188 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 OR10T2Q8NGX3 314 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 ZNF296Q8WUU4 475 aaPredicted RBP10.73□□□□□ -0.69
VPS25-203ENST00000589520 CHMP6Q96FZ7 201 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 PWWP2AQ96N64 755 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 PPP1R2P1Q96PQ5 205 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 NAT9Q9BTE0 207 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 ADAM33Q9BZ11 813 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 ETNK1Q9HBU6 452 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 PPANQ9NQ55 473 aaKnown RBP10.73□□□□□ -0.69
VPS25-203ENST00000589520 PIGVQ9NUD9 493 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 DDIT4Q9NX09 232 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 ARHGEF38Q9NXL2 777 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 IGSF9Q9P2J2 1179 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 RABGEF1Q9UJ41 708 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 TRHDEQ9UKU6 1024 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 PCDHB5Q9Y5E4 795 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.73□□□□□ -0.69
VPS25-203ENST00000589520 TEX264Q9Y6I9 313 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 MKI67P46013 3256 aaKnown RBP10.73□□□□□ -0.69
VPS25-203ENST00000589520 CLUHO75153 1309 aa10.73□□□□□ -0.69
VPS25-203ENST00000589520 ATXN2Q99700 1313 aaKnown RBP10.73□□□□□ -0.69
VPS25-203ENST00000589520 RASA4BC9J798 803 aa10.72□□□□□ -0.69
VPS25-203ENST00000589520 PRPF4O43172 522 aaKnown RBP eCLIP10.72□□□□□ -0.69
VPS25-203ENST00000589520 RASA4O43374 803 aa10.72□□□□□ -0.69
VPS25-203ENST00000589520 FAM155BO75949 473 aa10.72□□□□□ -0.69
VPS25-203ENST00000589520 DDHD2O94830 711 aa10.72□□□□□ -0.69
VPS25-203ENST00000589520 TMEM63AO94886 807 aa10.72□□□□□ -0.69
VPS25-203ENST00000589520 IGLV3-25P01717 112 aa10.72□□□□□ -0.69
VPS25-203ENST00000589520 BRAFP15056 766 aa10.72□□□□□ -0.69
VPS25-203ENST00000589520 IGFBP6P24592 240 aaPredicted RBP10.72□□□□□ -0.69
VPS25-203ENST00000589520 DNAJB2P25686 324 aa10.72□□□□□ -0.69
VPS25-203ENST00000589520 CCR1P32246 355 aa10.72□□□□□ -0.69
VPS25-203ENST00000589520 YWHAGP61981 247 aaKnown RBP eCLIP10.72□□□□□ -0.69
VPS25-203ENST00000589520 NRG1Q02297 640 aaPredicted RBP10.72□□□□□ -0.69
VPS25-203ENST00000589520 EIF4EBP2Q13542 120 aaPredicted RBP10.72□□□□□ -0.69
VPS25-203ENST00000589520 KCTD19Q17RG1 926 aaPredicted RBP10.72□□□□□ -0.69
VPS25-203ENST00000589520 ANKRD20A2Q5SQ80 823 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms