RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 F11P03951 625 aa10.95□□□□□ -0.66
NEDD4L-224ENST00000588712 SRGAP2BP0DMP2 458 aa10.95□□□□□ -0.66
NEDD4L-224ENST00000588712 KRT10P13645 584 aa10.95□□□□□ -0.66
NEDD4L-224ENST00000588712 DDX6P26196 483 aaKnown RBP eCLIP10.95□□□□□ -0.66
NEDD4L-224ENST00000588712 ATXN1P54253 815 aaKnown RBP10.95□□□□□ -0.66
NEDD4L-224ENST00000588712 ERCC6LQ2NKX8 1250 aa10.95□□□□□ -0.66
NEDD4L-224ENST00000588712 RAB6CQ53S08 254 aa10.95□□□□□ -0.66
NEDD4L-224ENST00000588712 SLC9A4Q6AI14 798 aa10.95□□□□□ -0.66
NEDD4L-224ENST00000588712 CCDC137Q6PK04 289 aaKnown RBP10.95□□□□□ -0.66
NEDD4L-224ENST00000588712 ADAT2Q7Z6V5 191 aaKnown RBP10.95□□□□□ -0.66
NEDD4L-224ENST00000588712 KLHL7Q8IXQ5 586 aa10.95□□□□□ -0.66
NEDD4L-224ENST00000588712 CCDC105Q8IYK2 499 aa10.95□□□□□ -0.66
NEDD4L-224ENST00000588712 PRELID2Q8N945 189 aa10.95□□□□□ -0.66
NEDD4L-224ENST00000588712 TSC1Q92574 1164 aa10.95□□□□□ -0.66
NEDD4L-224ENST00000588712 SLCO2A1Q92959 643 aa10.95□□□□□ -0.66
NEDD4L-224ENST00000588712 AZIN2Q96A70 460 aa10.95□□□□□ -0.66
NEDD4L-224ENST00000588712 PLD4Q96BZ4 506 aa10.95□□□□□ -0.66
NEDD4L-224ENST00000588712 HAUS1Q96CS2 278 aa10.95□□□□□ -0.66
NEDD4L-224ENST00000588712 RAB6CQ9H0N0 254 aa10.95□□□□□ -0.66
NEDD4L-224ENST00000588712 RAB17Q9H0T7 212 aa10.95□□□□□ -0.66
NEDD4L-224ENST00000588712 TLE6Q9H808 572 aa10.95□□□□□ -0.66
NEDD4L-224ENST00000588712 MAN1C1Q9NR34 630 aa10.95□□□□□ -0.66
NEDD4L-224ENST00000588712 SMARCAL1Q9NZC9 954 aa10.95□□□□□ -0.66
NEDD4L-224ENST00000588712 CEP290O15078 2479 aa10.95□□□□□ -0.66
NEDD4L-224ENST00000588712 GBF1Q92538 1859 aa10.95□□□□□ -0.66
NEDD4L-224ENST00000588712 A0A1W2PPC1 479 aa10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 SLC12A8A0AV02 714 aa10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 SPDYE4A6NLX3 237 aa10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 EEF2KO00418 725 aaKnown RBP10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 FGF10O15520 208 aaPredicted RBP10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 GAS8O95995 478 aa10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 IL4RP24394 825 aa10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 IRS1P35568 1242 aa10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 COILP38432 576 aaPredicted RBP10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 HARS2P49590 506 aaKnown RBP10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 MLLT6P55198 1093 aaPredicted RBP10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 DR1Q01658 176 aa10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 DMTNQ08495 405 aa10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 BYSLQ13895 437 aaKnown RBP10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 LRRC31Q6UY01 552 aa10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 MIB1Q86YT6 1006 aa10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 NOA1Q8NC60 698 aaKnown RBP10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 CCHCR1Q8TD31 782 aa10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 ACSF2Q96CM8 615 aaPredicted RBP10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 CSPG4P5Q96PW8 444 aa10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 KCTD15Q96SI1 283 aaPredicted RBP10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 DDX50Q9BQ39 737 aaKnown RBP10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 FERMT1Q9BQL6 677 aa10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 DCLK3Q9C098 648 aa10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 UTP11Q9Y3A2 253 aaKnown RBP10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 ZNF197O14709 1029 aa10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 NCAM2O15394 837 aa10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 OAS1P00973 400 aaKnown RBP10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 IGLV3-27P01718 113 aa10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 CD48P09326 243 aa10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 SLC11A2P49281 568 aa10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 PGFP49763 221 aa10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 TPI1P60174 286 aa10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 SIX1Q15475 284 aaPredicted RBP10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 CA9Q16790 459 aa10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 ARHGAP15Q53QZ3 475 aa10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 RFX8Q6ZV50 586 aa10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 MTERF4Q7Z6M4 381 aaKnown RBP10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 IFT20Q8IY31 132 aa10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 MRPL38Q96DV4 380 aaKnown RBP10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 FCRL2Q96LA5 508 aaPredicted RBP10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 LRRC1Q9BTT6 524 aa10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 DDX47Q9H0S4 455 aaKnown RBP10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 CATSPERBQ9H7T0 1116 aa10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 CCSER2Q9H7U1 834 aa10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 DZANK1Q9NVP4 752 aa10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 GPATCH2LQ9NWQ4 482 aa10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 MTMR10Q9NXD2 777 aa10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 CWC15Q9P013 229 aaKnown RBP10.94□□□□□ -0.66
NEDD4L-224ENST00000588712 DYNC1I1O14576 645 aa10.93□□□□□ -0.66
NEDD4L-224ENST00000588712 NDC80O14777 642 aa10.93□□□□□ -0.66
NEDD4L-224ENST00000588712 COCHO43405 550 aa10.93□□□□□ -0.66
NEDD4L-224ENST00000588712 CREB3O43889 395 aa10.93□□□□□ -0.66
NEDD4L-224ENST00000588712 PAGE1O75459 146 aa10.93□□□□□ -0.66
NEDD4L-224ENST00000588712 ECEL1O95672 775 aa10.93□□□□□ -0.66
NEDD4L-224ENST00000588712 LATS1O95835 1130 aa10.93□□□□□ -0.66
NEDD4L-224ENST00000588712 HDCP19113 662 aa10.93□□□□□ -0.66
NEDD4L-224ENST00000588712 GABRR2P28476 465 aa10.93□□□□□ -0.66
NEDD4L-224ENST00000588712 STIP1P31948 543 aaKnown RBP10.93□□□□□ -0.66
NEDD4L-224ENST00000588712 SERPINB6P35237 376 aa10.93□□□□□ -0.66
NEDD4L-224ENST00000588712 EPHA5P54756 1037 aa10.93□□□□□ -0.66
NEDD4L-224ENST00000588712 SEMA3BQ13214 749 aa10.93□□□□□ -0.66
NEDD4L-224ENST00000588712 XRCC4Q13426 336 aa10.93□□□□□ -0.66
NEDD4L-224ENST00000588712 DUSP6Q16828 381 aa10.93□□□□□ -0.66
NEDD4L-224ENST00000588712 LZTR1Q8N653 840 aa10.93□□□□□ -0.66
NEDD4L-224ENST00000588712 PCDH19Q8TAB3 1148 aa10.93□□□□□ -0.66
NEDD4L-224ENST00000588712 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.93□□□□□ -0.66
NEDD4L-224ENST00000588712 NKD2Q969F2 451 aaPredicted RBP10.93□□□□□ -0.66
NEDD4L-224ENST00000588712 PRKD2Q9BZL6 878 aa10.93□□□□□ -0.66
NEDD4L-224ENST00000588712 ARGLU1Q9NWB6 273 aaPredicted RBP10.93□□□□□ -0.66
NEDD4L-224ENST00000588712 LMCD1Q9NZU5 365 aa10.93□□□□□ -0.66
NEDD4L-224ENST00000588712 PPARGC1AQ9UBK2 798 aaKnown RBP10.93□□□□□ -0.66
NEDD4L-224ENST00000588712 NUDT5Q9UKK9 219 aa10.93□□□□□ -0.66
NEDD4L-224ENST00000588712 TRAV19A0A0A6YYK7 116 aa10.93□□□□□ -0.66
NEDD4L-224ENST00000588712 TCRBV7S2A1N4TA0A589 114 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms