RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 DDX23Q9BUQ8 820 aaKnown RBP20.96■□□□□ 0.95
ATG4D-208ENST00000588667 TAS2R14Q9NYV8 317 aa20.96■□□□□ 0.95
ATG4D-208ENST00000588667 WDR35Q9P2L0 1181 aa20.96■□□□□ 0.95
ATG4D-208ENST00000588667 ZNF510Q9Y2H8 683 aa20.96■□□□□ 0.95
ATG4D-208ENST00000588667 CTAGE9A4FU28 777 aa20.96■□□□□ 0.95
ATG4D-208ENST00000588667 IGLV3-27P01718 113 aa20.96■□□□□ 0.95
ATG4D-208ENST00000588667 CORO1AP31146 461 aaKnown RBP20.96■□□□□ 0.95
ATG4D-208ENST00000588667 RING1Q06587 406 aa20.96■□□□□ 0.95
ATG4D-208ENST00000588667 TMEM31Q5JXX7 168 aa20.96■□□□□ 0.95
ATG4D-208ENST00000588667 TAC4Q86UU9 113 aa20.96■□□□□ 0.95
ATG4D-208ENST00000588667 RALGPS2Q86X27 583 aaPredicted RBP20.96■□□□□ 0.95
ATG4D-208ENST00000588667 ADGRG2Q8IZP9 1017 aa20.96■□□□□ 0.95
ATG4D-208ENST00000588667 TTC8Q8TAM2 541 aa20.96■□□□□ 0.95
ATG4D-208ENST00000588667 PBXIP1Q96AQ6 731 aa20.96■□□□□ 0.95
ATG4D-208ENST00000588667 TBC1D17Q9HA65 648 aa20.96■□□□□ 0.95
ATG4D-208ENST00000588667 PRR33A8MZF0 331 aa20.95■□□□□ 0.94
ATG4D-208ENST00000588667 SPECC1L-ADORA2AF8WAN1 911 aa20.95■□□□□ 0.94
ATG4D-208ENST00000588667 GOLGA8SH3BPF8 625 aa20.95■□□□□ 0.94
ATG4D-208ENST00000588667 MAN2B1O00754 1011 aa20.95■□□□□ 0.94
ATG4D-208ENST00000588667 MOCS3O95396 460 aa20.95■□□□□ 0.94
ATG4D-208ENST00000588667 PDGFBP01127 241 aaPredicted RBP20.95■□□□□ 0.94
ATG4D-208ENST00000588667 IGLV3-25P01717 112 aa20.95■□□□□ 0.94
ATG4D-208ENST00000588667 KLKB1P03952 638 aa20.95■□□□□ 0.94
ATG4D-208ENST00000588667 CYP17A1P05093 508 aa20.95■□□□□ 0.94
ATG4D-208ENST00000588667 CTHP32929 405 aa20.95■□□□□ 0.94
ATG4D-208ENST00000588667 NOS2P35228 1153 aa20.95■□□□□ 0.94
ATG4D-208ENST00000588667 MATKP42679 507 aa20.95■□□□□ 0.94
ATG4D-208ENST00000588667 HARS2P49590 506 aaKnown RBP20.95■□□□□ 0.94
ATG4D-208ENST00000588667 NR1H3Q13133 447 aa20.95■□□□□ 0.94
ATG4D-208ENST00000588667 ZNF852Q6ZMS4 543 aa20.95■□□□□ 0.94
ATG4D-208ENST00000588667 ARCQ7LC44 396 aa20.95■□□□□ 0.94
ATG4D-208ENST00000588667 TLR6Q9Y2C9 796 aa20.95■□□□□ 0.94
ATG4D-208ENST00000588667 IRAK2O43187 625 aa20.94■□□□□ 0.94
ATG4D-208ENST00000588667 TRUB2O95900 331 aaKnown RBP20.94■□□□□ 0.94
ATG4D-208ENST00000588667 ADH1CP00326 375 aa20.94■□□□□ 0.94
ATG4D-208ENST00000588667 ABCB4P21439 1286 aa20.94■□□□□ 0.94
ATG4D-208ENST00000588667 SOX9P48436 509 aa20.94■□□□□ 0.94
ATG4D-208ENST00000588667 TBX4P57082 545 aa20.94■□□□□ 0.94
ATG4D-208ENST00000588667 RNASE9P60153 205 aaKnown RBP20.94■□□□□ 0.94
ATG4D-208ENST00000588667 AMPD2Q01433 879 aa20.94■□□□□ 0.94
ATG4D-208ENST00000588667 NUGGCQ68CJ6 796 aa20.94■□□□□ 0.94
ATG4D-208ENST00000588667 DNAAF5Q86Y56 855 aa20.94■□□□□ 0.94
ATG4D-208ENST00000588667 ADAM32Q8TC27 787 aa20.94■□□□□ 0.94
ATG4D-208ENST00000588667 RFFLQ8WZ73 363 aa20.94■□□□□ 0.94
ATG4D-208ENST00000588667 NAPGQ99747 312 aaPredicted RBP20.94■□□□□ 0.94
ATG4D-208ENST00000588667 RRN3Q9NYV6 651 aa20.94■□□□□ 0.94
ATG4D-208ENST00000588667 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.94■□□□□ 0.94
ATG4D-208ENST00000588667 SALL4Q9UJQ4 1053 aa20.94■□□□□ 0.94
ATG4D-208ENST00000588667 TMEM59LQ9UK28 342 aa20.94■□□□□ 0.94
ATG4D-208ENST00000588667 CAPN6Q9Y6Q1 641 aa20.94■□□□□ 0.94
ATG4D-208ENST00000588667 ZNF318Q5VUA4 2279 aa20.94■□□□□ 0.94
ATG4D-208ENST00000588667 KANSL1LA0AUZ9 987 aa20.93■□□□□ 0.94
ATG4D-208ENST00000588667 SHISA7A6NL88 538 aa20.93■□□□□ 0.94
ATG4D-208ENST00000588667 FANCGO15287 622 aa20.93■□□□□ 0.94
ATG4D-208ENST00000588667 BUB1O43683 1085 aa20.93■□□□□ 0.94
ATG4D-208ENST00000588667 LATS1O95835 1130 aa20.93■□□□□ 0.94
ATG4D-208ENST00000588667 NOP2P46087 812 aaKnown RBP20.93■□□□□ 0.94
ATG4D-208ENST00000588667 DHCR24Q15392 516 aa20.93■□□□□ 0.94
ATG4D-208ENST00000588667 CWF19L1Q69YN2 538 aaKnown RBP20.93■□□□□ 0.94
ATG4D-208ENST00000588667 DENND1CQ8IV53 801 aa20.93■□□□□ 0.94
ATG4D-208ENST00000588667 UNC45BQ8IWX7 931 aa20.93■□□□□ 0.94
ATG4D-208ENST00000588667 MCOLN2Q8IZK6 566 aa20.93■□□□□ 0.94
ATG4D-208ENST00000588667 C3orf20Q8ND61 904 aa20.93■□□□□ 0.94
ATG4D-208ENST00000588667 FLCNQ8NFG4 579 aa20.93■□□□□ 0.94
ATG4D-208ENST00000588667 TRIM11Q96F44 468 aa20.93■□□□□ 0.94
ATG4D-208ENST00000588667 VCPIP1Q96JH7 1222 aa20.93■□□□□ 0.94
ATG4D-208ENST00000588667 CALR3Q96L12 384 aaKnown RBP20.93■□□□□ 0.94
ATG4D-208ENST00000588667 THAP2Q9H0W7 228 aa20.93■□□□□ 0.94
ATG4D-208ENST00000588667 FAM204AQ9H8W3 233 aa20.93■□□□□ 0.94
ATG4D-208ENST00000588667 METTL5Q9NRN9 209 aaKnown RBP20.93■□□□□ 0.94
ATG4D-208ENST00000588667 AGO1Q9UL18 857 aaKnown RBP20.93■□□□□ 0.94
ATG4D-208ENST00000588667 STAP1Q9ULZ2 295 aa20.93■□□□□ 0.94
ATG4D-208ENST00000588667 MRPS17Q9Y2R5 130 aaKnown RBP20.93■□□□□ 0.94
ATG4D-208ENST00000588667 GBP1P32455 592 aa20.93■□□□□ 0.94
ATG4D-208ENST00000588667 GJA4P35212 333 aa20.93■□□□□ 0.94
ATG4D-208ENST00000588667 PITX1P78337 314 aaPredicted RBP20.93■□□□□ 0.94
ATG4D-208ENST00000588667 LY6G5CQ5SRR4 150 aa20.93■□□□□ 0.94
ATG4D-208ENST00000588667 RHBDF2Q6PJF5 856 aa20.93■□□□□ 0.94
ATG4D-208ENST00000588667 RHOT2Q8IXI1 618 aa20.93■□□□□ 0.94
ATG4D-208ENST00000588667 FBXL6Q8N531 539 aa20.93■□□□□ 0.94
ATG4D-208ENST00000588667 FAM3CQ92520 227 aa20.93■□□□□ 0.94
ATG4D-208ENST00000588667 SLC39A13Q96H72 371 aa20.93■□□□□ 0.94
ATG4D-208ENST00000588667 FCRL2Q96LA5 508 aaPredicted RBP20.93■□□□□ 0.94
ATG4D-208ENST00000588667 SPHK2Q9NRA0 654 aa20.93■□□□□ 0.94
ATG4D-208ENST00000588667 DDIT4Q9NX09 232 aa20.93■□□□□ 0.94
ATG4D-208ENST00000588667 STK25O00506 426 aa20.92■□□□□ 0.94
ATG4D-208ENST00000588667 URI1O94763 535 aaPredicted RBP20.92■□□□□ 0.94
ATG4D-208ENST00000588667 CD72P21854 359 aa20.92■□□□□ 0.94
ATG4D-208ENST00000588667 CHKAP35790 457 aa20.92■□□□□ 0.94
ATG4D-208ENST00000588667 FLT3P36888 993 aa20.92■□□□□ 0.94
ATG4D-208ENST00000588667 EIF4EBP2Q13542 120 aaPredicted RBP20.92■□□□□ 0.94
ATG4D-208ENST00000588667 FAM217AQ8IXS0 508 aa20.92■□□□□ 0.94
ATG4D-208ENST00000588667 NT5C3BQ969T7 300 aa20.92■□□□□ 0.94
ATG4D-208ENST00000588667 CHFRQ96EP1 664 aa20.92■□□□□ 0.94
ATG4D-208ENST00000588667 NELL2Q99435 816 aa20.92■□□□□ 0.94
ATG4D-208ENST00000588667 NPY6RQ99463 290 aa20.92■□□□□ 0.94
ATG4D-208ENST00000588667 LTB4R2Q9NPC1 389 aa20.92■□□□□ 0.94
ATG4D-208ENST00000588667 JRKLQ9Y4A0 524 aa20.92■□□□□ 0.94
ATG4D-208ENST00000588667 KIAA1549LQ6ZVL6 1849 aa20.91■□□□□ 0.94
ATG4D-208ENST00000588667 MYBL1P10243 752 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms