RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 PPP1R13BQ96KQ4 1090 aa20.35■□□□□ 0.85
TPM4-208ENST00000588410 GABRG3Q99928 467 aa20.35■□□□□ 0.85
TPM4-208ENST00000588410 LSM14BQ9BX40 385 aaKnown RBP20.35■□□□□ 0.85
TPM4-208ENST00000588410 CIPCQ9C0C6 399 aa20.35■□□□□ 0.85
TPM4-208ENST00000588410 LHX5Q9H2C1 402 aa20.35■□□□□ 0.85
TPM4-208ENST00000588410 SYNCQ9H7C4 482 aa20.35■□□□□ 0.85
TPM4-208ENST00000588410 POPDC2Q9HBU9 364 aa20.35■□□□□ 0.85
TPM4-208ENST00000588410 ANO10Q9NW15 660 aa20.35■□□□□ 0.85
TPM4-208ENST00000588410 TLR6Q9Y2C9 796 aa20.35■□□□□ 0.85
TPM4-208ENST00000588410 A0A1W2PQF6 199 aa20.34■□□□□ 0.85
TPM4-208ENST00000588410 IRAK2O43187 625 aa20.34■□□□□ 0.85
TPM4-208ENST00000588410 TIMM44O43615 452 aa20.34■□□□□ 0.85
TPM4-208ENST00000588410 ACSL4O60488 711 aa20.34■□□□□ 0.85
TPM4-208ENST00000588410 GABRG2P18507 467 aa20.34■□□□□ 0.85
TPM4-208ENST00000588410 HOXD9P28356 352 aaPredicted RBP20.34■□□□□ 0.85
TPM4-208ENST00000588410 MPLP40238 635 aa20.34■□□□□ 0.85
TPM4-208ENST00000588410 P2RY2P41231 377 aa20.34■□□□□ 0.85
TPM4-208ENST00000588410 CREB5Q02930 508 aa20.34■□□□□ 0.85
TPM4-208ENST00000588410 NNTQ13423 1086 aa20.34■□□□□ 0.85
TPM4-208ENST00000588410 EIF4HQ15056 248 aaKnown RBP20.34■□□□□ 0.85
TPM4-208ENST00000588410 AASDHQ4L235 1098 aaPredicted RBP20.34■□□□□ 0.85
TPM4-208ENST00000588410 KLHDC7AQ5VTJ3 777 aa20.34■□□□□ 0.85
TPM4-208ENST00000588410 PMS2CLQ68D20 193 aa20.34■□□□□ 0.85
TPM4-208ENST00000588410 ERMP1Q7Z2K6 904 aa20.34■□□□□ 0.85
TPM4-208ENST00000588410 DGLUCYQ7Z3D6 616 aa20.34■□□□□ 0.85
TPM4-208ENST00000588410 SLC47A2Q86VL8 602 aa20.34■□□□□ 0.85
TPM4-208ENST00000588410 FAM71AQ8IYT1 594 aa20.34■□□□□ 0.85
TPM4-208ENST00000588410 ADAM32Q8TC27 787 aa20.34■□□□□ 0.85
TPM4-208ENST00000588410 NETO1Q8TDF5 533 aa20.34■□□□□ 0.85
TPM4-208ENST00000588410 AZIN2Q96A70 460 aa20.34■□□□□ 0.85
TPM4-208ENST00000588410 ERLEC1Q96DZ1 483 aa20.34■□□□□ 0.85
TPM4-208ENST00000588410 IRX2Q9BZI1 471 aaPredicted RBP20.34■□□□□ 0.85
TPM4-208ENST00000588410 ELOVL2Q9NXB9 296 aa20.34■□□□□ 0.85
TPM4-208ENST00000588410 DLL3Q9NYJ7 618 aa20.34■□□□□ 0.85
TPM4-208ENST00000588410 CLEC4EQ9ULY5 219 aa20.34■□□□□ 0.85
TPM4-208ENST00000588410 RAD54BQ9Y620 910 aa20.34■□□□□ 0.85
TPM4-208ENST00000588410 STON1Q9Y6Q2 735 aa20.34■□□□□ 0.85
TPM4-208ENST00000588410 CFAP54Q96N23 3096 aa20.33■□□□□ 0.85
TPM4-208ENST00000588410 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.33■□□□□ 0.85
TPM4-208ENST00000588410 GOLGA6L7A0A1B0GV03 622 aa20.33■□□□□ 0.85
TPM4-208ENST00000588410 TYW5A2RUC4 315 aaKnown RBP20.33■□□□□ 0.85
TPM4-208ENST00000588410 APOEP02649 317 aa20.33■□□□□ 0.85
TPM4-208ENST00000588410 ZNF806P0C7X5 589 aa20.33■□□□□ 0.85
TPM4-208ENST00000588410 PNMA6AP0CW24 399 aaPredicted RBP20.33■□□□□ 0.85
TPM4-208ENST00000588410 BCKDHBP21953 392 aa20.33■□□□□ 0.85
TPM4-208ENST00000588410 CLCN1P35523 988 aa20.33■□□□□ 0.85
TPM4-208ENST00000588410 KCNMA1Q12791 1236 aa20.33■□□□□ 0.85
TPM4-208ENST00000588410 DRAP1Q14919 205 aaPredicted RBP20.33■□□□□ 0.85
TPM4-208ENST00000588410 STX1AQ16623 288 aa20.33■□□□□ 0.85
TPM4-208ENST00000588410 SYPL2Q5VXT5 272 aa20.33■□□□□ 0.85
TPM4-208ENST00000588410 RFWD3Q6PCD5 774 aa20.33■□□□□ 0.85
TPM4-208ENST00000588410 LPCAT2Q7L5N7 544 aa20.33■□□□□ 0.85
TPM4-208ENST00000588410 TAC4Q86UU9 113 aa20.33■□□□□ 0.85
TPM4-208ENST00000588410 C1orf131Q8NDD1 294 aaKnown RBP20.33■□□□□ 0.85
TPM4-208ENST00000588410 ANKRD20A12PQ8NF67 263 aa20.33■□□□□ 0.85
TPM4-208ENST00000588410 FCRL2Q96LA5 508 aaPredicted RBP20.33■□□□□ 0.85
TPM4-208ENST00000588410 CPXM1Q96SM3 734 aa20.33■□□□□ 0.85
TPM4-208ENST00000588410 VPS16Q9H269 839 aa20.33■□□□□ 0.85
TPM4-208ENST00000588410 VPS45Q9NRW7 570 aa20.33■□□□□ 0.85
TPM4-208ENST00000588410 THAP10Q9P2Z0 257 aaPredicted RBP20.33■□□□□ 0.85
TPM4-208ENST00000588410 FHOD1Q9Y613 1164 aa20.33■□□□□ 0.85
TPM4-208ENST00000588410 WASH3PC4AMC7 463 aa20.32■□□□□ 0.84
TPM4-208ENST00000588410 TBL1XO60907 577 aa20.32■□□□□ 0.84
TPM4-208ENST00000588410 MOCS2O96007 188 aaPredicted RBP20.32■□□□□ 0.84
TPM4-208ENST00000588410 DHPSP49366 369 aaPredicted RBP20.32■□□□□ 0.84
TPM4-208ENST00000588410 EFHC1Q5JVL4 640 aa20.32■□□□□ 0.84
TPM4-208ENST00000588410 FKBP15Q5T1M5 1219 aa20.32■□□□□ 0.84
TPM4-208ENST00000588410 MPP7Q5T2T1 576 aa20.32■□□□□ 0.84
TPM4-208ENST00000588410 CCDC183Q5T5S1 534 aa20.32■□□□□ 0.84
TPM4-208ENST00000588410 PIK3R6Q5UE93 754 aa20.32■□□□□ 0.84
TPM4-208ENST00000588410 OR6B2Q6IFH4 312 aa20.32■□□□□ 0.84
TPM4-208ENST00000588410 KIAA1211LQ6NV74 962 aa20.32■□□□□ 0.84
TPM4-208ENST00000588410 C11orf57Q6ZUT1 292 aaPredicted RBP20.32■□□□□ 0.84
TPM4-208ENST00000588410 CYP2U1Q7Z449 544 aa20.32■□□□□ 0.84
TPM4-208ENST00000588410 CCDC117Q8IWD4 279 aaPredicted RBP20.32■□□□□ 0.84
TPM4-208ENST00000588410 WDTC1Q8N5D0 677 aa20.32■□□□□ 0.84
TPM4-208ENST00000588410 ZNF557Q8N988 423 aaPredicted RBP20.32■□□□□ 0.84
TPM4-208ENST00000588410 WFIKKN2Q8TEU8 576 aa20.32■□□□□ 0.84
TPM4-208ENST00000588410 CALCOCO1Q9P1Z2 691 aa20.32■□□□□ 0.84
TPM4-208ENST00000588410 BCLAF3A2AJT9 711 aaKnown RBP20.31■□□□□ 0.84
TPM4-208ENST00000588410 SYNCRIPO60506 623 aaKnown RBP20.31■□□□□ 0.84
TPM4-208ENST00000588410 ZNF217O75362 1048 aa20.31■□□□□ 0.84
TPM4-208ENST00000588410 CAVIN2O95810 425 aa20.31■□□□□ 0.84
TPM4-208ENST00000588410 TRUB2O95900 331 aaKnown RBP20.31■□□□□ 0.84
TPM4-208ENST00000588410 GLI1P08151 1106 aa20.31■□□□□ 0.84
TPM4-208ENST00000588410 UCHL3P15374 230 aa20.31■□□□□ 0.84
TPM4-208ENST00000588410 CDK17Q00537 523 aa20.31■□□□□ 0.84
TPM4-208ENST00000588410 FOXK2Q01167 660 aa20.31■□□□□ 0.84
TPM4-208ENST00000588410 KRT31Q15323 416 aa20.31■□□□□ 0.84
TPM4-208ENST00000588410 SF3A2Q15428 464 aaKnown RBP20.31■□□□□ 0.84
TPM4-208ENST00000588410 MAP7D1Q3KQU3 841 aa20.31■□□□□ 0.84
TPM4-208ENST00000588410 DCAF6Q58WW2 860 aa20.31■□□□□ 0.84
TPM4-208ENST00000588410 FAM133BQ5BKY9 247 aaKnown RBP20.31■□□□□ 0.84
TPM4-208ENST00000588410 CDKAL1Q5VV42 579 aa20.31■□□□□ 0.84
TPM4-208ENST00000588410 HJURPQ8NCD3 748 aaPredicted RBP20.31■□□□□ 0.84
TPM4-208ENST00000588410 SLC39A13Q96H72 371 aa20.31■□□□□ 0.84
TPM4-208ENST00000588410 RTKNQ9BST9 563 aa20.31■□□□□ 0.84
TPM4-208ENST00000588410 FAM204AQ9H8W3 233 aa20.31■□□□□ 0.84
TPM4-208ENST00000588410 ABCB8Q9NUT2 735 aa20.31■□□□□ 0.84
TPM4-208ENST00000588410 FANCLQ9NW38 375 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms