RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 TAF5Q15542 800 aa10.51□□□□□ -0.73
TPM4-207ENST00000588032 FYB2Q5VWT5 728 aa10.51□□□□□ -0.73
TPM4-207ENST00000588032 NAA35Q5VZE5 725 aa10.51□□□□□ -0.73
TPM4-207ENST00000588032 PPP1R2P3Q6NXS1 205 aa10.51□□□□□ -0.73
TPM4-207ENST00000588032 LRSAM1Q6UWE0 723 aa10.51□□□□□ -0.73
TPM4-207ENST00000588032 TRMT11Q7Z4G4 463 aaKnown RBP10.51□□□□□ -0.73
TPM4-207ENST00000588032 TAC4Q86UU9 113 aa10.51□□□□□ -0.73
TPM4-207ENST00000588032 DEFB106AQ8N104 65 aa10.51□□□□□ -0.73
TPM4-207ENST00000588032 TERB1Q8NA31 727 aa10.51□□□□□ -0.73
TPM4-207ENST00000588032 ZBTB44Q8NCP5 570 aa10.51□□□□□ -0.73
TPM4-207ENST00000588032 RPLP0P6Q8NHW5 317 aa10.51□□□□□ -0.73
TPM4-207ENST00000588032 DDI1Q8WTU0 396 aa10.51□□□□□ -0.73
TPM4-207ENST00000588032 SLC20A1Q8WUM9 679 aa10.51□□□□□ -0.73
TPM4-207ENST00000588032 CPA5Q8WXQ8 436 aa10.51□□□□□ -0.73
TPM4-207ENST00000588032 EZH1Q92800 747 aaPredicted RBP10.51□□□□□ -0.73
TPM4-207ENST00000588032 BTN2A3PQ96KV6 586 aa10.51□□□□□ -0.73
TPM4-207ENST00000588032 FCRL2Q96LA5 508 aaPredicted RBP10.51□□□□□ -0.73
TPM4-207ENST00000588032 AGPAT1Q99943 283 aa10.51□□□□□ -0.73
TPM4-207ENST00000588032 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.51□□□□□ -0.73
TPM4-207ENST00000588032 AIPL1Q9NZN9 384 aa10.51□□□□□ -0.73
TPM4-207ENST00000588032 STAP1Q9ULZ2 295 aa10.51□□□□□ -0.73
TPM4-207ENST00000588032 SLC27A6Q9Y2P4 619 aa10.51□□□□□ -0.73
TPM4-207ENST00000588032 STARD13Q9Y3M8 1113 aa10.51□□□□□ -0.73
TPM4-207ENST00000588032 TYW5A2RUC4 315 aaKnown RBP10.5□□□□□ -0.73
TPM4-207ENST00000588032 K7ESF4 209 aa10.5□□□□□ -0.73
TPM4-207ENST00000588032 GFRA2O00451 464 aa10.5□□□□□ -0.73
TPM4-207ENST00000588032 TIMM44O43615 452 aa10.5□□□□□ -0.73
TPM4-207ENST00000588032 CISD3P0C7P0 127 aa10.5□□□□□ -0.73
TPM4-207ENST00000588032 UNGP13051 313 aaPredicted RBP10.5□□□□□ -0.73
TPM4-207ENST00000588032 TDGF1P13385 188 aa10.5□□□□□ -0.73
TPM4-207ENST00000588032 ABCB4P21439 1286 aa10.5□□□□□ -0.73
TPM4-207ENST00000588032 CCR1P32246 355 aa10.5□□□□□ -0.73
TPM4-207ENST00000588032 KIR2DL1P43626 348 aaPredicted RBP10.5□□□□□ -0.73
TPM4-207ENST00000588032 NSFP46459 744 aaKnown RBP10.5□□□□□ -0.73
TPM4-207ENST00000588032 KDSRQ06136 332 aa10.5□□□□□ -0.73
TPM4-207ENST00000588032 EOGTQ5NDL2 527 aa10.5□□□□□ -0.73
TPM4-207ENST00000588032 C10orf76Q5T2E6 689 aa10.5□□□□□ -0.73
TPM4-207ENST00000588032 ACBD5Q5T8D3 534 aaPredicted RBP10.5□□□□□ -0.73
TPM4-207ENST00000588032 PIK3R6Q5UE93 754 aa10.5□□□□□ -0.73
TPM4-207ENST00000588032 SFMBT2Q5VUG0 894 aa10.5□□□□□ -0.73
TPM4-207ENST00000588032 SND1Q7KZF4 910 aaKnown RBP eCLIP10.5□□□□□ -0.73
TPM4-207ENST00000588032 IRF2BP2Q7Z5L9 587 aa10.5□□□□□ -0.73
TPM4-207ENST00000588032 XYLT1Q86Y38 959 aa10.5□□□□□ -0.73
TPM4-207ENST00000588032 PHF13Q86YI8 300 aaPredicted RBP10.5□□□□□ -0.73
TPM4-207ENST00000588032 ATP6V0D2Q8N8Y2 350 aa10.5□□□□□ -0.73
TPM4-207ENST00000588032 BAP1Q92560 729 aa10.5□□□□□ -0.73
TPM4-207ENST00000588032 NKD2Q969F2 451 aaPredicted RBP10.5□□□□□ -0.73
TPM4-207ENST00000588032 NT5C3BQ969T7 300 aa10.5□□□□□ -0.73
TPM4-207ENST00000588032 PGAP3Q96FM1 320 aaPredicted RBP10.5□□□□□ -0.73
TPM4-207ENST00000588032 PIWIL1Q96J94 861 aaKnown RBP10.5□□□□□ -0.73
TPM4-207ENST00000588032 FAM204AQ9H8W3 233 aa10.5□□□□□ -0.73
TPM4-207ENST00000588032 DDIT4Q9NX09 232 aa10.5□□□□□ -0.73
TPM4-207ENST00000588032 PLK2Q9NYY3 685 aa10.5□□□□□ -0.73
TPM4-207ENST00000588032 PAXBP1Q9Y5B6 917 aa10.5□□□□□ -0.73
TPM4-207ENST00000588032 A0A1W2PQJ5 194 aa10.49□□□□□ -0.73
TPM4-207ENST00000588032 LRRC53A6NM62 1247 aa10.49□□□□□ -0.73
TPM4-207ENST00000588032 KCNU1A8MYU2 1149 aa10.49□□□□□ -0.73
TPM4-207ENST00000588032 M0QYT0 321 aa10.49□□□□□ -0.73
TPM4-207ENST00000588032 NPC1O15118 1278 aa10.49□□□□□ -0.73
TPM4-207ENST00000588032 LILRB5O75023 590 aa10.49□□□□□ -0.73
TPM4-207ENST00000588032 GRAP2O75791 330 aa10.49□□□□□ -0.73
TPM4-207ENST00000588032 CALB1P05937 261 aa10.49□□□□□ -0.73
TPM4-207ENST00000588032 TNFAIP3P21580 790 aa10.49□□□□□ -0.73
TPM4-207ENST00000588032 PBX1P40424 430 aa10.49□□□□□ -0.73
TPM4-207ENST00000588032 DGKEP52429 567 aa10.49□□□□□ -0.73
TPM4-207ENST00000588032 SEC13P55735 322 aa10.49□□□□□ -0.73
TPM4-207ENST00000588032 GSCP56915 257 aaPredicted RBP10.49□□□□□ -0.73
TPM4-207ENST00000588032 RNASE9P60153 205 aaKnown RBP10.49□□□□□ -0.73
TPM4-207ENST00000588032 CENPCQ03188 943 aa10.49□□□□□ -0.73
TPM4-207ENST00000588032 DMC1Q14565 340 aa10.49□□□□□ -0.73
TPM4-207ENST00000588032 EIF4HQ15056 248 aaKnown RBP10.49□□□□□ -0.73
TPM4-207ENST00000588032 ASIC2Q16515 512 aa10.49□□□□□ -0.73
TPM4-207ENST00000588032 CLEC16AQ2KHT3 1053 aa10.49□□□□□ -0.73
TPM4-207ENST00000588032 SLC25A52Q3SY17 297 aa10.49□□□□□ -0.73
TPM4-207ENST00000588032 C2orf27AQ580R0 203 aa10.49□□□□□ -0.73
TPM4-207ENST00000588032 FAM133BQ5BKY9 247 aaKnown RBP10.49□□□□□ -0.73
TPM4-207ENST00000588032 ZC3H12AQ5D1E8 599 aaKnown RBP10.49□□□□□ -0.73
TPM4-207ENST00000588032 FAM102AQ5T9C2 384 aaPredicted RBP10.49□□□□□ -0.73
TPM4-207ENST00000588032 SDE2Q6IQ49 451 aa10.49□□□□□ -0.73
TPM4-207ENST00000588032 TSSK4Q6SA08 328 aa10.49□□□□□ -0.73
TPM4-207ENST00000588032 LONP2Q86WA8 852 aa10.49□□□□□ -0.73
TPM4-207ENST00000588032 CCDC117Q8IWD4 279 aaPredicted RBP10.49□□□□□ -0.73
TPM4-207ENST00000588032 ADAM32Q8TC27 787 aa10.49□□□□□ -0.73
TPM4-207ENST00000588032 UCMAQ8WVF2 138 aa10.49□□□□□ -0.73
TPM4-207ENST00000588032 SYN2Q92777 582 aaPredicted RBP10.49□□□□□ -0.73
TPM4-207ENST00000588032 BHMTQ93088 406 aa10.49□□□□□ -0.73
TPM4-207ENST00000588032 RNF34Q969K3 372 aa10.49□□□□□ -0.73
TPM4-207ENST00000588032 VCPIP1Q96JH7 1222 aa10.49□□□□□ -0.73
TPM4-207ENST00000588032 PCDHB18PQ96TA0 734 aa10.49□□□□□ -0.73
TPM4-207ENST00000588032 NPY6RQ99463 290 aa10.49□□□□□ -0.73
TPM4-207ENST00000588032 TTYH3Q9C0H2 523 aa10.49□□□□□ -0.73
TPM4-207ENST00000588032 FAM86C1Q9NVL1 165 aa10.49□□□□□ -0.73
TPM4-207ENST00000588032 IFNKQ9P0W0 207 aa10.49□□□□□ -0.73
TPM4-207ENST00000588032 EBF1Q9UH73 591 aa10.49□□□□□ -0.73
TPM4-207ENST00000588032 TMEM59LQ9UK28 342 aa10.49□□□□□ -0.73
TPM4-207ENST00000588032 MMP17Q9ULZ9 603 aa10.49□□□□□ -0.73
TPM4-207ENST00000588032 BZW2Q9Y6E2 419 aaKnown RBP10.49□□□□□ -0.73
TPM4-207ENST00000588032 CBFA2T2O43439 604 aa10.48□□□□□ -0.73
TPM4-207ENST00000588032 TSPAN3O60637 253 aa10.48□□□□□ -0.73
TPM4-207ENST00000588032 APBB3O95704 486 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms