RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 PEBP4Q96S96 227 aa15.5■□□□□ 0.07
NFIX-208ENST00000587260 PSMB7Q99436 277 aa15.5■□□□□ 0.07
NFIX-208ENST00000587260 TASP1Q9H6P5 420 aa15.5■□□□□ 0.07
NFIX-208ENST00000587260 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.5■□□□□ 0.07
NFIX-208ENST00000587260 PCSK1NQ9UHG2 260 aa15.5■□□□□ 0.07
NFIX-208ENST00000587260 CPQQ9Y646 472 aa15.5■□□□□ 0.07
NFIX-208ENST00000587260 RARAP10276 462 aa15.49■□□□□ 0.07
NFIX-208ENST00000587260 SP100P23497 879 aaPredicted RBP15.49■□□□□ 0.07
NFIX-208ENST00000587260 AVPR1AP37288 418 aa15.49■□□□□ 0.07
NFIX-208ENST00000587260 MTHFRP42898 656 aa15.49■□□□□ 0.07
NFIX-208ENST00000587260 COPS2P61201 443 aa15.49■□□□□ 0.07
NFIX-208ENST00000587260 ATP13A4Q4VNC1 1196 aa15.49■□□□□ 0.07
NFIX-208ENST00000587260 SCYL2Q6P3W7 929 aa15.49■□□□□ 0.07
NFIX-208ENST00000587260 ZNF572Q7Z3I7 529 aaPredicted RBP15.49■□□□□ 0.07
NFIX-208ENST00000587260 VSIG1Q86XK7 387 aa15.49■□□□□ 0.07
NFIX-208ENST00000587260 MAFAQ8NHW3 353 aaPredicted RBP15.49■□□□□ 0.07
NFIX-208ENST00000587260 FAM71BQ8TC56 605 aa15.49■□□□□ 0.07
NFIX-208ENST00000587260 FGF13Q92913 245 aa15.49■□□□□ 0.07
NFIX-208ENST00000587260 HLA-CQ95604 372 aa15.49■□□□□ 0.07
NFIX-208ENST00000587260 RNF34Q969K3 372 aa15.49■□□□□ 0.07
NFIX-208ENST00000587260 NTAN1Q96AB6 310 aa15.49■□□□□ 0.07
NFIX-208ENST00000587260 RBM41Q96IZ5 413 aaKnown RBP15.49■□□□□ 0.07
NFIX-208ENST00000587260 DOCK8Q8NF50 2099 aa15.49■□□□□ 0.07
NFIX-208ENST00000587260 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.48■□□□□ 0.07
NFIX-208ENST00000587260 GRXCR2A6NFK2 248 aa15.48■□□□□ 0.07
NFIX-208ENST00000587260 PRAMEF12O95522 483 aa15.48■□□□□ 0.07
NFIX-208ENST00000587260 PTPN7P35236 360 aa15.48■□□□□ 0.07
NFIX-208ENST00000587260 ARSEP51690 589 aa15.48■□□□□ 0.07
NFIX-208ENST00000587260 TBX4P57082 545 aa15.48■□□□□ 0.07
NFIX-208ENST00000587260 SCAPQ12770 1279 aa15.48■□□□□ 0.07
NFIX-208ENST00000587260 TAZQ16635 292 aa15.48■□□□□ 0.07
NFIX-208ENST00000587260 ERMARDQ5T6L9 678 aa15.48■□□□□ 0.07
NFIX-208ENST00000587260 CMTM8Q8IZV2 173 aa15.48■□□□□ 0.07
NFIX-208ENST00000587260 ST13P5Q8NFI4 369 aaPredicted RBP15.48■□□□□ 0.07
NFIX-208ENST00000587260 ZSCAN18Q8TBC5 510 aaPredicted RBP15.48■□□□□ 0.07
NFIX-208ENST00000587260 ZWILCHQ9H900 591 aa15.48■□□□□ 0.07
NFIX-208ENST00000587260 GKN1Q9NS71 199 aa15.48■□□□□ 0.07
NFIX-208ENST00000587260 C3orf70A6NLC5 250 aaPredicted RBP15.48■□□□□ 0.07
NFIX-208ENST00000587260 SCAMP3O14828 347 aaKnown RBP15.48■□□□□ 0.07
NFIX-208ENST00000587260 CEP104O60308 925 aa15.48■□□□□ 0.07
NFIX-208ENST00000587260 MOCS2O96007 188 aaPredicted RBP15.48■□□□□ 0.07
NFIX-208ENST00000587260 GBP2P32456 591 aaPredicted RBP15.48■□□□□ 0.07
NFIX-208ENST00000587260 ADRA1BP35368 520 aa15.48■□□□□ 0.07
NFIX-208ENST00000587260 PAFAH1B1P43034 410 aa15.48■□□□□ 0.07
NFIX-208ENST00000587260 KCNQ1P51787 676 aa15.48■□□□□ 0.07
NFIX-208ENST00000587260 ZXDBP98169 803 aa15.48■□□□□ 0.07
NFIX-208ENST00000587260 CKAP4Q07065 602 aaKnown RBP15.48■□□□□ 0.07
NFIX-208ENST00000587260 SMAD4Q13485 552 aaKnown RBP15.48■□□□□ 0.07
NFIX-208ENST00000587260 TRIP4Q15650 581 aaPredicted RBP15.48■□□□□ 0.07
NFIX-208ENST00000587260 SMTNL2Q2TAL5 461 aa15.48■□□□□ 0.07
NFIX-208ENST00000587260 ZC3H12AQ5D1E8 599 aaKnown RBP15.48■□□□□ 0.07
NFIX-208ENST00000587260 KCNT1Q5JUK3 1230 aa15.48■□□□□ 0.07
NFIX-208ENST00000587260 SEL1L2Q5TEA6 688 aa15.48■□□□□ 0.07
NFIX-208ENST00000587260 SND1Q7KZF4 910 aaKnown RBP eCLIP15.48■□□□□ 0.07
NFIX-208ENST00000587260 CCDC185Q8N715 623 aa15.48■□□□□ 0.07
NFIX-208ENST00000587260 SUSD6Q92537 303 aa15.48■□□□□ 0.07
NFIX-208ENST00000587260 RAPGEF5Q92565 580 aa15.48■□□□□ 0.07
NFIX-208ENST00000587260 ACSF2Q96CM8 615 aaPredicted RBP15.48■□□□□ 0.07
NFIX-208ENST00000587260 ZFRQ96KR1 1074 aaKnown RBP15.48■□□□□ 0.07
NFIX-208ENST00000587260 FCRL2Q96LA5 508 aaPredicted RBP15.48■□□□□ 0.07
NFIX-208ENST00000587260 NECTIN4Q96NY8 510 aa15.48■□□□□ 0.07
NFIX-208ENST00000587260 KLF16Q9BXK1 252 aaPredicted RBP15.48■□□□□ 0.07
NFIX-208ENST00000587260 TMPRSS4Q9NRS4 437 aa15.48■□□□□ 0.07
NFIX-208ENST00000587260 FZD10Q9ULW2 581 aa15.48■□□□□ 0.07
NFIX-208ENST00000587260 CCL26Q9Y258 94 aa15.48■□□□□ 0.07
NFIX-208ENST00000587260 TLR6Q9Y2C9 796 aa15.48■□□□□ 0.07
NFIX-208ENST00000587260 EFR3BQ9Y2G0 817 aa15.48■□□□□ 0.07
NFIX-208ENST00000587260 PRUNE2Q8WUY3 3088 aa15.48■□□□□ 0.07
NFIX-208ENST00000587260 ZNF487B1APH4 448 aa15.47■□□□□ 0.07
NFIX-208ENST00000587260 PDE2AO00408 941 aaPredicted RBP15.47■□□□□ 0.07
NFIX-208ENST00000587260 MBTPS2O43462 519 aa15.47■□□□□ 0.07
NFIX-208ENST00000587260 PFKLP17858 780 aa15.47■□□□□ 0.07
NFIX-208ENST00000587260 KDELR1P24390 212 aa15.47■□□□□ 0.07
NFIX-208ENST00000587260 SLC7A9P82251 487 aa15.47■□□□□ 0.07
NFIX-208ENST00000587260 ZNF211Q13398 564 aaPredicted RBP15.47■□□□□ 0.07
NFIX-208ENST00000587260 PPP2R5DQ14738 602 aa15.47■□□□□ 0.07
NFIX-208ENST00000587260 PDK2Q15119 407 aa15.47■□□□□ 0.07
NFIX-208ENST00000587260 PPP2R5EQ16537 467 aa15.47■□□□□ 0.07
NFIX-208ENST00000587260 DPYSL2Q16555 572 aa15.47■□□□□ 0.07
NFIX-208ENST00000587260 BRMS1LQ5PSV4 323 aa15.47■□□□□ 0.07
NFIX-208ENST00000587260 CEP112Q8N8E3 955 aa15.47■□□□□ 0.07
NFIX-208ENST00000587260 USP13Q92995 863 aaPredicted RBP15.47■□□□□ 0.07
NFIX-208ENST00000587260 WBP2Q969T9 261 aa15.47■□□□□ 0.07
NFIX-208ENST00000587260 SLC39A13Q96H72 371 aa15.47■□□□□ 0.07
NFIX-208ENST00000587260 MS4A14Q96JA4 679 aa15.47■□□□□ 0.07
NFIX-208ENST00000587260 CAPZA3Q96KX2 299 aa15.47■□□□□ 0.07
NFIX-208ENST00000587260 MYADMQ96S97 322 aa15.47■□□□□ 0.07
NFIX-208ENST00000587260 NAP1L3Q99457 506 aaPredicted RBP15.47■□□□□ 0.07
NFIX-208ENST00000587260 SNRNP25Q9BV90 132 aaKnown RBP15.47■□□□□ 0.07
NFIX-208ENST00000587260 TKTL2Q9H0I9 626 aa15.47■□□□□ 0.07
NFIX-208ENST00000587260 ANLNQ9NQW6 1124 aa15.47■□□□□ 0.07
NFIX-208ENST00000587260 PRDM6Q9NQX0 595 aa15.47■□□□□ 0.07
NFIX-208ENST00000587260 KLHL11Q9NVR0 708 aa15.47■□□□□ 0.07
NFIX-208ENST00000587260 ARHGEF38Q9NXL2 777 aa15.47■□□□□ 0.07
NFIX-208ENST00000587260 CDH7Q9ULB5 785 aa15.47■□□□□ 0.07
NFIX-208ENST00000587260 HBS1LQ9Y450 684 aaKnown RBP15.47■□□□□ 0.07
NFIX-208ENST00000587260 KCNU1A8MYU2 1149 aa15.46■□□□□ 0.07
NFIX-208ENST00000587260 PGRMC1O00264 195 aaKnown RBP15.46■□□□□ 0.07
NFIX-208ENST00000587260 STC2O76061 302 aa15.46■□□□□ 0.07
NFIX-208ENST00000587260 APOEP02649 317 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms