RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 USP18Q9UMW8 372 aa19.82■□□□□ 0.76
TPM4-204ENST00000586499 A0A1W2PQF6 199 aa19.81■□□□□ 0.76
TPM4-204ENST00000586499 EPHB6O15197 1021 aa19.81■□□□□ 0.76
TPM4-204ENST00000586499 ACSL4O60488 711 aa19.81■□□□□ 0.76
TPM4-204ENST00000586499 GRAP2O75791 330 aa19.81■□□□□ 0.76
TPM4-204ENST00000586499 ALDH1A2O94788 518 aa19.81■□□□□ 0.76
TPM4-204ENST00000586499 LATS1O95835 1130 aa19.81■□□□□ 0.76
TPM4-204ENST00000586499 ERBB2P04626 1255 aa19.81■□□□□ 0.76
TPM4-204ENST00000586499 CYP11B1P15538 503 aa19.81■□□□□ 0.76
TPM4-204ENST00000586499 BPIFB4P59827 614 aa19.81■□□□□ 0.76
TPM4-204ENST00000586499 RING1Q06587 406 aa19.81■□□□□ 0.76
TPM4-204ENST00000586499 CCDC6Q16204 474 aa19.81■□□□□ 0.76
TPM4-204ENST00000586499 PLK5Q496M5 336 aa19.81■□□□□ 0.76
TPM4-204ENST00000586499 PTPN20Q4JDL3 420 aa19.81■□□□□ 0.76
TPM4-204ENST00000586499 USP39Q53GS9 565 aaKnown RBP19.81■□□□□ 0.76
TPM4-204ENST00000586499 FAM133BQ5BKY9 247 aaKnown RBP19.81■□□□□ 0.76
TPM4-204ENST00000586499 TAF3Q5VWG9 929 aa19.81■□□□□ 0.76
TPM4-204ENST00000586499 NUGGCQ68CJ6 796 aa19.81■□□□□ 0.76
TPM4-204ENST00000586499 TMEM215Q68D42 235 aa19.81■□□□□ 0.76
TPM4-204ENST00000586499 OR6B2Q6IFH4 312 aa19.81■□□□□ 0.76
TPM4-204ENST00000586499 KIAA1211LQ6NV74 962 aa19.81■□□□□ 0.76
TPM4-204ENST00000586499 FAM183BPQ6ZVS7 135 aa19.81■□□□□ 0.76
TPM4-204ENST00000586499 BEND5Q7L4P6 421 aa19.81■□□□□ 0.76
TPM4-204ENST00000586499 PGBD3Q8N328 593 aa19.81■□□□□ 0.76
TPM4-204ENST00000586499 FRMD1Q8N878 549 aa19.81■□□□□ 0.76
TPM4-204ENST00000586499 MYEOVQ96EZ4 313 aa19.81■□□□□ 0.76
TPM4-204ENST00000586499 SERPINB11Q96P15 392 aa19.81■□□□□ 0.76
TPM4-204ENST00000586499 STK33Q9BYT3 514 aa19.81■□□□□ 0.76
TPM4-204ENST00000586499 DUSP15Q9H1R2 295 aaPredicted RBP19.81■□□□□ 0.76
TPM4-204ENST00000586499 ARRDC1-AS1Q9H2J1 176 aa19.81■□□□□ 0.76
TPM4-204ENST00000586499 FAM207AQ9NSI2 230 aaPredicted RBP19.81■□□□□ 0.76
TPM4-204ENST00000586499 BCCIPQ9P287 314 aaKnown RBP eCLIP19.81■□□□□ 0.76
TPM4-204ENST00000586499 LIMA1Q9UHB6 759 aaKnown RBP19.81■□□□□ 0.76
TPM4-204ENST00000586499 TLR6Q9Y2C9 796 aa19.81■□□□□ 0.76
TPM4-204ENST00000586499 RAD54BQ9Y620 910 aa19.81■□□□□ 0.76
TPM4-204ENST00000586499 SPTBN4Q9H254 2564 aa19.81■□□□□ 0.76
TPM4-204ENST00000586499 F8VZ95 297 aa19.8■□□□□ 0.76
TPM4-204ENST00000586499 TRUB2O95900 331 aaKnown RBP19.8■□□□□ 0.76
TPM4-204ENST00000586499 BCKDHBP21953 392 aa19.8■□□□□ 0.76
TPM4-204ENST00000586499 SLC11A2P49281 568 aa19.8■□□□□ 0.76
TPM4-204ENST00000586499 POLR2FP61218 127 aaKnown RBP19.8■□□□□ 0.76
TPM4-204ENST00000586499 DCAF6Q58WW2 860 aa19.8■□□□□ 0.76
TPM4-204ENST00000586499 ZC3H12AQ5D1E8 599 aaKnown RBP19.8■□□□□ 0.76
TPM4-204ENST00000586499 PIK3R6Q5UE93 754 aa19.8■□□□□ 0.76
TPM4-204ENST00000586499 SMYD5Q6GMV2 418 aa19.8■□□□□ 0.76
TPM4-204ENST00000586499 SDE2Q6IQ49 451 aa19.8■□□□□ 0.76
TPM4-204ENST00000586499 CAVIN1Q6NZI2 390 aaKnown RBP19.8■□□□□ 0.76
TPM4-204ENST00000586499 NOP9Q86U38 636 aaKnown RBP19.8■□□□□ 0.76
TPM4-204ENST00000586499 DEFB106AQ8N104 65 aa19.8■□□□□ 0.76
TPM4-204ENST00000586499 AOPEPQ8N6M6 819 aa19.8■□□□□ 0.76
TPM4-204ENST00000586499 SORCS1Q8WY21 1168 aa19.8■□□□□ 0.76
TPM4-204ENST00000586499 DDX1Q92499 740 aaKnown RBP19.8■□□□□ 0.76
TPM4-204ENST00000586499 ZC3H10Q96K80 434 aaKnown RBP19.8■□□□□ 0.76
TPM4-204ENST00000586499 NOX5Q96PH1 765 aa19.8■□□□□ 0.76
TPM4-204ENST00000586499 SLC2A11Q9BYW1 496 aa19.8■□□□□ 0.76
TPM4-204ENST00000586499 PDCL3Q9H2J4 239 aa19.8■□□□□ 0.76
TPM4-204ENST00000586499 XPO7Q9UIA9 1087 aaKnown RBP19.8■□□□□ 0.76
TPM4-204ENST00000586499 DCHS1Q96JQ0 3298 aa19.79■□□□□ 0.76
TPM4-204ENST00000586499 TBL1XO60907 577 aa19.79■□□□□ 0.76
TPM4-204ENST00000586499 MOCS2O96007 188 aaPredicted RBP19.79■□□□□ 0.76
TPM4-204ENST00000586499 TPM2P07951 284 aa19.79■□□□□ 0.76
TPM4-204ENST00000586499 GABRG2P18507 467 aa19.79■□□□□ 0.76
TPM4-204ENST00000586499 HLA-FP30511 346 aa19.79■□□□□ 0.76
TPM4-204ENST00000586499 GBP1P32455 592 aa19.79■□□□□ 0.76
TPM4-204ENST00000586499 ANO6Q4KMQ2 910 aa19.79■□□□□ 0.76
TPM4-204ENST00000586499 FKBP15Q5T1M5 1219 aa19.79■□□□□ 0.76
TPM4-204ENST00000586499 OLFML1Q6UWY5 402 aa19.79■□□□□ 0.76
TPM4-204ENST00000586499 APTXQ7Z2E3 356 aaKnown RBP19.79■□□□□ 0.76
TPM4-204ENST00000586499 ANKS1BQ7Z6G8 1248 aa19.79■□□□□ 0.76
TPM4-204ENST00000586499 OLIG1Q8TAK6 271 aa19.79■□□□□ 0.76
TPM4-204ENST00000586499 WFDC5Q8TCV5 224 aa19.79■□□□□ 0.76
TPM4-204ENST00000586499 IPO4Q8TEX9 1081 aaKnown RBP19.79■□□□□ 0.76
TPM4-204ENST00000586499 AZIN2Q96A70 460 aa19.79■□□□□ 0.76
TPM4-204ENST00000586499 RMDN1Q96DB5 314 aa19.79■□□□□ 0.76
TPM4-204ENST00000586499 GABRG3Q99928 467 aa19.79■□□□□ 0.76
TPM4-204ENST00000586499 TRIM62Q9BVG3 475 aa19.79■□□□□ 0.76
TPM4-204ENST00000586499 CD248Q9HCU0 757 aa19.79■□□□□ 0.76
TPM4-204ENST00000586499 NLRC4Q9NPP4 1024 aa19.79■□□□□ 0.76
TPM4-204ENST00000586499 SEMA4GQ9NTN9 838 aa19.79■□□□□ 0.76
TPM4-204ENST00000586499 SIK3Q9Y2K2 1263 aa19.79■□□□□ 0.76
TPM4-204ENST00000586499 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.79■□□□□ 0.76
TPM4-204ENST00000586499 SYNJ2BP-COX16A0A087WUM0 186 aa19.78■□□□□ 0.76
TPM4-204ENST00000586499 IRAK2O43187 625 aa19.78■□□□□ 0.76
TPM4-204ENST00000586499 IGLV3-25P01717 112 aa19.78■□□□□ 0.76
TPM4-204ENST00000586499 ATP1A3P13637 1013 aa19.78■□□□□ 0.76
TPM4-204ENST00000586499 ZNF18P17022 549 aa19.78■□□□□ 0.76
TPM4-204ENST00000586499 CDK11BP21127 795 aaKnown RBP19.78■□□□□ 0.76
TPM4-204ENST00000586499 NNTQ13423 1086 aa19.78■□□□□ 0.76
TPM4-204ENST00000586499 SYCP1Q15431 976 aa19.78■□□□□ 0.76
TPM4-204ENST00000586499 EFHC1Q5JVL4 640 aa19.78■□□□□ 0.76
TPM4-204ENST00000586499 GPR161Q8N6U8 529 aaKnown RBP19.78■□□□□ 0.76
TPM4-204ENST00000586499 PRICKLE1Q96MT3 831 aaPredicted RBP19.78■□□□□ 0.76
TPM4-204ENST00000586499 SLC2A13Q96QE2 648 aa19.78■□□□□ 0.76
TPM4-204ENST00000586499 CIPCQ9C0C6 399 aa19.78■□□□□ 0.76
TPM4-204ENST00000586499 NUCKS1Q9H1E3 243 aaKnown RBP19.78■□□□□ 0.76
TPM4-204ENST00000586499 SLC6A17Q9H1V8 727 aa19.78■□□□□ 0.76
TPM4-204ENST00000586499 SYNCQ9H7C4 482 aa19.78■□□□□ 0.76
TPM4-204ENST00000586499 ABCB8Q9NUT2 735 aa19.78■□□□□ 0.76
TPM4-204ENST00000586499 ELOVL2Q9NXB9 296 aa19.78■□□□□ 0.76
TPM4-204ENST00000586499 COX16Q9P0S2 106 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms