RNA–Protein interactions for RNA: ENST00000584997.1

CASC3-210, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-210ENST00000584997 USP3Q9Y6I4 520 aa10.9□□□□□ -0.66
CASC3-210ENST00000584997 KNTC1P50748 2209 aa10.9□□□□□ -0.66
CASC3-210ENST00000584997 ASXL3Q9C0F0 2248 aa10.9□□□□□ -0.66
CASC3-210ENST00000584997 TP53BP1Q12888 1972 aaPredicted RBP10.89□□□□□ -0.67
CASC3-210ENST00000584997 CELSR3Q9NYQ7 3312 aa10.89□□□□□ -0.67
CASC3-210ENST00000584997 SLC12A8A0AV02 714 aa10.89□□□□□ -0.67
CASC3-210ENST00000584997 CSNK1EP49674 416 aaKnown RBP10.89□□□□□ -0.67
CASC3-210ENST00000584997 VAMP7P51809 220 aa10.89□□□□□ -0.67
CASC3-210ENST00000584997 BNC1Q01954 994 aa10.89□□□□□ -0.67
CASC3-210ENST00000584997 FOXD4L6Q3SYB3 417 aaPredicted RBP10.89□□□□□ -0.67
CASC3-210ENST00000584997 KMT5BQ4FZB7 885 aa10.89□□□□□ -0.67
CASC3-210ENST00000584997 FNDC3BQ53EP0 1204 aaKnown RBP10.89□□□□□ -0.67
CASC3-210ENST00000584997 ZNF394Q53GI3 561 aa10.89□□□□□ -0.67
CASC3-210ENST00000584997 PPP1R26Q5T8A7 1209 aaPredicted RBP10.89□□□□□ -0.67
CASC3-210ENST00000584997 FOXD4L3Q6VB84 417 aaPredicted RBP10.89□□□□□ -0.67
CASC3-210ENST00000584997 ARHGAP18Q8N392 663 aa10.89□□□□□ -0.67
CASC3-210ENST00000584997 CCDC150Q8NCX0 1101 aa10.89□□□□□ -0.67
CASC3-210ENST00000584997 ENGASEQ8NFI3 743 aa10.89□□□□□ -0.67
CASC3-210ENST00000584997 OR2T3Q8NH03 318 aa10.89□□□□□ -0.67
CASC3-210ENST00000584997 BAHD1Q8TBE0 780 aaPredicted RBP10.89□□□□□ -0.67
CASC3-210ENST00000584997 TMEM174Q8WUU8 243 aa10.89□□□□□ -0.67
CASC3-210ENST00000584997 PIWIL1Q96J94 861 aaKnown RBP10.89□□□□□ -0.67
CASC3-210ENST00000584997 LRIG1Q96JA1 1093 aa10.89□□□□□ -0.67
CASC3-210ENST00000584997 SLC2A11Q9BYW1 496 aa10.89□□□□□ -0.67
CASC3-210ENST00000584997 LHX5Q9H2C1 402 aa10.89□□□□□ -0.67
CASC3-210ENST00000584997 KCTD10Q9H3F6 313 aa10.89□□□□□ -0.67
CASC3-210ENST00000584997 MMRN2Q9H8L6 949 aa10.89□□□□□ -0.67
CASC3-210ENST00000584997 TOR4AQ9NXH8 423 aa10.89□□□□□ -0.67
CASC3-210ENST00000584997 CLEC4EQ9ULY5 219 aa10.89□□□□□ -0.67
CASC3-210ENST00000584997 TIMM44O43615 452 aa10.88□□□□□ -0.67
CASC3-210ENST00000584997 CALUO43852 315 aaPredicted RBP10.88□□□□□ -0.67
CASC3-210ENST00000584997 KLRC4O43908 158 aa10.88□□□□□ -0.67
CASC3-210ENST00000584997 TRIM49P0CI25 452 aa10.88□□□□□ -0.67
CASC3-210ENST00000584997 TRIM49CP0CI26 452 aa10.88□□□□□ -0.67
CASC3-210ENST00000584997 KRT13P13646 458 aa10.88□□□□□ -0.67
CASC3-210ENST00000584997 HLA-EP13747 358 aa10.88□□□□□ -0.67
CASC3-210ENST00000584997 ACSL1P33121 698 aa10.88□□□□□ -0.67
CASC3-210ENST00000584997 GCLMP48507 274 aa10.88□□□□□ -0.67
CASC3-210ENST00000584997 CCT8P50990 548 aa10.88□□□□□ -0.67
CASC3-210ENST00000584997 SLC8A3P57103 927 aa10.88□□□□□ -0.67
CASC3-210ENST00000584997 YWHAGP61981 247 aaKnown RBP eCLIP10.88□□□□□ -0.67
CASC3-210ENST00000584997 KIF19Q2TAC6 998 aa10.88□□□□□ -0.67
CASC3-210ENST00000584997 MPPE1Q53F39 396 aa10.88□□□□□ -0.67
CASC3-210ENST00000584997 CCDC157Q569K6 752 aa10.88□□□□□ -0.67
CASC3-210ENST00000584997 C1orf220Q5T0J3 134 aa10.88□□□□□ -0.67
CASC3-210ENST00000584997 RESP18Q5W5W9 173 aa10.88□□□□□ -0.67
CASC3-210ENST00000584997 DBX2Q6ZNG2 339 aa10.88□□□□□ -0.67
CASC3-210ENST00000584997 INTS8Q75QN2 995 aaKnown RBP10.88□□□□□ -0.67
CASC3-210ENST00000584997 ADAT2Q7Z6V5 191 aaKnown RBP10.88□□□□□ -0.67
CASC3-210ENST00000584997 C1orf216Q8TAB5 229 aa10.88□□□□□ -0.67
CASC3-210ENST00000584997 TAS1R2Q8TE23 839 aa10.88□□□□□ -0.67
CASC3-210ENST00000584997 PLD4Q96BZ4 506 aa10.88□□□□□ -0.67
CASC3-210ENST00000584997 HEXIM2Q96MH2 286 aaKnown RBP10.88□□□□□ -0.67
CASC3-210ENST00000584997 ARID3AQ99856 593 aa10.88□□□□□ -0.67
CASC3-210ENST00000584997 C6orf106Q9H6K1 298 aaPredicted RBP10.88□□□□□ -0.67
CASC3-210ENST00000584997 APOBEC3GQ9HC16 384 aaKnown RBP10.88□□□□□ -0.67
CASC3-210ENST00000584997 SCUBE2Q9NQ36 999 aa10.88□□□□□ -0.67
CASC3-210ENST00000584997 DKK4Q9UBT3 224 aa10.88□□□□□ -0.67
CASC3-210ENST00000584997 SERTAD1Q9UHV2 236 aa10.88□□□□□ -0.67
CASC3-210ENST00000584997 PCDHA7Q9UN72 937 aa10.88□□□□□ -0.67
CASC3-210ENST00000584997 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.88□□□□□ -0.67
CASC3-210ENST00000584997 BTBD3Q9Y2F9 522 aa10.88□□□□□ -0.67
CASC3-210ENST00000584997 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.88□□□□□ -0.67
CASC3-210ENST00000584997 SNX11Q9Y5W9 270 aa10.88□□□□□ -0.67
CASC3-210ENST00000584997 MAPK13O15264 365 aa10.87□□□□□ -0.67
CASC3-210ENST00000584997 TNFSF14O43557 240 aa10.87□□□□□ -0.67
CASC3-210ENST00000584997 SEMA4FO95754 770 aa10.87□□□□□ -0.67
CASC3-210ENST00000584997 DNTTP04053 509 aa10.87□□□□□ -0.67
CASC3-210ENST00000584997 SLFN14P0C7P3 912 aa10.87□□□□□ -0.67
CASC3-210ENST00000584997 PDIA4P13667 645 aaKnown RBP10.87□□□□□ -0.67
CASC3-210ENST00000584997 NR2F2P24468 414 aa10.87□□□□□ -0.67
CASC3-210ENST00000584997 GRK6P43250 576 aa10.87□□□□□ -0.67
CASC3-210ENST00000584997 GRIA4P48058 902 aa10.87□□□□□ -0.67
CASC3-210ENST00000584997 HARS2P49590 506 aaKnown RBP10.87□□□□□ -0.67
CASC3-210ENST00000584997 CYP4F3Q08477 520 aa10.87□□□□□ -0.67
CASC3-210ENST00000584997 CAMK2GQ13555 558 aaPredicted RBP10.87□□□□□ -0.67
CASC3-210ENST00000584997 INAVAQ3KP66 663 aa10.87□□□□□ -0.67
CASC3-210ENST00000584997 TTC31Q49AM3 519 aaPredicted RBP10.87□□□□□ -0.67
CASC3-210ENST00000584997 TMEM215Q68D42 235 aa10.87□□□□□ -0.67
CASC3-210ENST00000584997 CLEC17AQ6ZS10 378 aa10.87□□□□□ -0.67
CASC3-210ENST00000584997 CHST9Q7L1S5 443 aa10.87□□□□□ -0.67
CASC3-210ENST00000584997 MARCH9Q86YJ5 346 aa10.87□□□□□ -0.67
CASC3-210ENST00000584997 ZNF366Q8N895 744 aa10.87□□□□□ -0.67
CASC3-210ENST00000584997 RBBP8NLQ8NC74 664 aaPredicted RBP10.87□□□□□ -0.67
CASC3-210ENST00000584997 WFIKKN2Q8TEU8 576 aa10.87□□□□□ -0.67
CASC3-210ENST00000584997 PAGE5Q96GU1 130 aa10.87□□□□□ -0.67
CASC3-210ENST00000584997 BTBD1Q9H0C5 482 aa10.87□□□□□ -0.67
CASC3-210ENST00000584997 PLA2G4CQ9UP65 541 aa10.87□□□□□ -0.67
CASC3-210ENST00000584997 ANKRD6Q9Y2G4 727 aa10.87□□□□□ -0.67
CASC3-210ENST00000584997 SLCO1B1Q9Y6L6 691 aa10.87□□□□□ -0.67
CASC3-210ENST00000584997 MUC22E2RYF6 1773 aaPredicted RBP10.86□□□□□ -0.67
CASC3-210ENST00000584997 FAM149AA5PLN7 773 aa10.86□□□□□ -0.67
CASC3-210ENST00000584997 TRABD2BA6NFA1 517 aa10.86□□□□□ -0.67
CASC3-210ENST00000584997 ACTN4O43707 911 aaKnown RBP10.86□□□□□ -0.67
CASC3-210ENST00000584997 TSPAN3O60637 253 aa10.86□□□□□ -0.67
CASC3-210ENST00000584997 DKK1O94907 266 aa10.86□□□□□ -0.67
CASC3-210ENST00000584997 FSBPO95073 299 aa10.86□□□□□ -0.67
CASC3-210ENST00000584997 ZBED1O96006 694 aa10.86□□□□□ -0.67
CASC3-210ENST00000584997 HOXD9P28356 352 aaPredicted RBP10.86□□□□□ -0.67
CASC3-210ENST00000584997 HLA-FP30511 346 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms