RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 RBBP8NLQ8NC74 664 aaPredicted RBP21.33■■□□□ 1.01
TOP3A-219ENST00000584887 KCTD13Q8WZ19 329 aa21.33■■□□□ 1.01
TOP3A-219ENST00000584887 CNGB3Q9NQW8 809 aa21.33■■□□□ 1.01
TOP3A-219ENST00000584887 ABCC13Q9NSE7 274 aa21.33■■□□□ 1.01
TOP3A-219ENST00000584887 ELOVL2Q9NXB9 296 aa21.33■■□□□ 1.01
TOP3A-219ENST00000584887 CEP295Q9C0D2 2601 aa21.33■■□□□ 1
TOP3A-219ENST00000584887 BICDL2A1A5D9 508 aa21.32■■□□□ 1
TOP3A-219ENST00000584887 SERPINF2P08697 491 aa21.32■■□□□ 1
TOP3A-219ENST00000584887 CSRP1P21291 193 aaKnown RBP21.32■■□□□ 1
TOP3A-219ENST00000584887 PRKCHP24723 683 aa21.32■■□□□ 1
TOP3A-219ENST00000584887 DAOAP59103 153 aa21.32■■□□□ 1
TOP3A-219ENST00000584887 SHC2P98077 582 aa21.32■■□□□ 1
TOP3A-219ENST00000584887 PEAR1Q5VY43 1037 aaPredicted RBP21.32■■□□□ 1
TOP3A-219ENST00000584887 SERPINA13PQ6UXR4 307 aa21.32■■□□□ 1
TOP3A-219ENST00000584887 FAM217AQ8IXS0 508 aa21.32■■□□□ 1
TOP3A-219ENST00000584887 HDDC3Q8N4P3 179 aa21.32■■□□□ 1
TOP3A-219ENST00000584887 SLC2A11Q9BYW1 496 aa21.32■■□□□ 1
TOP3A-219ENST00000584887 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.32■■□□□ 1
TOP3A-219ENST00000584887 ADAMTS9Q9P2N4 1935 aa21.31■■□□□ 1
TOP3A-219ENST00000584887 MEI4A8MW99 385 aa21.31■■□□□ 1
TOP3A-219ENST00000584887 RNF225M0QZC1 329 aaPredicted RBP21.31■■□□□ 1
TOP3A-219ENST00000584887 EPHX1P07099 455 aa21.31■■□□□ 1
TOP3A-219ENST00000584887 CEACAM1P13688 526 aa21.31■■□□□ 1
TOP3A-219ENST00000584887 HOXD9P28356 352 aaPredicted RBP21.31■■□□□ 1
TOP3A-219ENST00000584887 CD6P30203 668 aa21.31■■□□□ 1
TOP3A-219ENST00000584887 EIF4HQ15056 248 aaKnown RBP21.31■■□□□ 1
TOP3A-219ENST00000584887 E2F5Q15329 346 aa21.31■■□□□ 1
TOP3A-219ENST00000584887 PKDCCQ504Y2 493 aa21.31■■□□□ 1
TOP3A-219ENST00000584887 SYCP2LQ5T4T6 812 aa21.31■■□□□ 1
TOP3A-219ENST00000584887 PMF1Q6P1K2 205 aa21.31■■□□□ 1
TOP3A-219ENST00000584887 TMPRSS6Q8IU80 811 aa21.31■■□□□ 1
TOP3A-219ENST00000584887 ARHGEF19Q8IW93 802 aa21.31■■□□□ 1
TOP3A-219ENST00000584887 OR2I1PQ8NGU4 316 aa21.31■■□□□ 1
TOP3A-219ENST00000584887 GOLGA1Q92805 767 aa21.31■■□□□ 1
TOP3A-219ENST00000584887 TOE1Q96GM8 510 aaKnown RBP21.31■■□□□ 1
TOP3A-219ENST00000584887 ZSWIM1Q9BR11 485 aa21.31■■□□□ 1
TOP3A-219ENST00000584887 MKRN2Q9H000 416 aaKnown RBP21.31■■□□□ 1
TOP3A-219ENST00000584887 SLC32A1Q9H598 525 aa21.31■■□□□ 1
TOP3A-219ENST00000584887 LAMA1P25391 3075 aa21.31■■□□□ 1
TOP3A-219ENST00000584887 PPP1R3GB7ZBB8 358 aa21.3■■□□□ 1
TOP3A-219ENST00000584887 MAOBP27338 520 aa21.3■■□□□ 1
TOP3A-219ENST00000584887 CNGA2Q16280 664 aa21.3■■□□□ 1
TOP3A-219ENST00000584887 PLEKHG6Q3KR16 790 aa21.3■■□□□ 1
TOP3A-219ENST00000584887 FNDC3BQ53EP0 1204 aaKnown RBP21.3■■□□□ 1
TOP3A-219ENST00000584887 CLEC4CQ8WTT0 213 aa21.3■■□□□ 1
TOP3A-219ENST00000584887 SLC35F5Q8WV83 523 aa21.3■■□□□ 1
TOP3A-219ENST00000584887 PRCCQ92733 491 aaPredicted RBP21.3■■□□□ 1
TOP3A-219ENST00000584887 FOXJ1Q92949 421 aa21.3■■□□□ 1
TOP3A-219ENST00000584887 TMA16Q96EY4 203 aaKnown RBP21.3■■□□□ 1
TOP3A-219ENST00000584887 SIPA1Q96FS4 1042 aa21.3■■□□□ 1
TOP3A-219ENST00000584887 GPR174Q9BXC1 333 aa21.3■■□□□ 1
TOP3A-219ENST00000584887 MIS12Q9H081 205 aa21.3■■□□□ 1
TOP3A-219ENST00000584887 CAPN10Q9HC96 672 aa21.3■■□□□ 1
TOP3A-219ENST00000584887 PMM2O15305 246 aa21.29■■□□□ 1
TOP3A-219ENST00000584887 TIMM44O43615 452 aa21.29■■□□□ 1
TOP3A-219ENST00000584887 OPHN1O60890 802 aa21.29■■□□□ 1
TOP3A-219ENST00000584887 GABBR2O75899 941 aa21.29■■□□□ 1
TOP3A-219ENST00000584887 LTFP02788 710 aa21.29■■□□□ 1
TOP3A-219ENST00000584887 KRT5P13647 590 aa21.29■■□□□ 1
TOP3A-219ENST00000584887 HLA-EP13747 358 aa21.29■■□□□ 1
TOP3A-219ENST00000584887 SPINK2P20155 84 aa21.29■■□□□ 1
TOP3A-219ENST00000584887 BMP6P22004 513 aa21.29■■□□□ 1
TOP3A-219ENST00000584887 ZNF445P59923 1031 aa21.29■■□□□ 1
TOP3A-219ENST00000584887 PAK1Q13153 545 aa21.29■■□□□ 1
TOP3A-219ENST00000584887 MORC3Q14149 939 aa21.29■■□□□ 1
TOP3A-219ENST00000584887 STILQ15468 1287 aa21.29■■□□□ 1
TOP3A-219ENST00000584887 WDR45BQ5MNZ6 344 aa21.29■■□□□ 1
TOP3A-219ENST00000584887 ADGRF1Q5T601 910 aa21.29■■□□□ 1
TOP3A-219ENST00000584887 TMEM215Q68D42 235 aa21.29■■□□□ 1
TOP3A-219ENST00000584887 MSANTD2Q6P1R3 559 aa21.29■■□□□ 1
TOP3A-219ENST00000584887 RFWD3Q6PCD5 774 aa21.29■■□□□ 1
TOP3A-219ENST00000584887 CHST9Q7L1S5 443 aa21.29■■□□□ 1
TOP3A-219ENST00000584887 ELOA2Q8IYF1 753 aaPredicted RBP21.29■■□□□ 1
TOP3A-219ENST00000584887 SCML4Q8N228 414 aa21.29■■□□□ 1
TOP3A-219ENST00000584887 MINDY1Q8N5J2 469 aa21.29■■□□□ 1
TOP3A-219ENST00000584887 LMO3Q8TAP4 145 aa21.29■■□□□ 1
TOP3A-219ENST00000584887 CYB5D2Q8WUJ1 264 aa21.29■■□□□ 1
TOP3A-219ENST00000584887 IRGQQ8WZA9 623 aa21.29■■□□□ 1
TOP3A-219ENST00000584887 ZNF419Q96HQ0 510 aaPredicted RBP21.29■■□□□ 1
TOP3A-219ENST00000584887 ABCB8Q9NUT2 735 aa21.29■■□□□ 1
TOP3A-219ENST00000584887 USP36Q9P275 1121 aaKnown RBP21.29■■□□□ 1
TOP3A-219ENST00000584887 ARHGAP33O14559 1287 aa21.28■■□□□ 1
TOP3A-219ENST00000584887 P4HA2O15460 535 aa21.28■■□□□ 1
TOP3A-219ENST00000584887 GADD45BO75293 160 aaPredicted RBP21.28■■□□□ 1
TOP3A-219ENST00000584887 SYPP08247 313 aa21.28■■□□□ 1
TOP3A-219ENST00000584887 ACADMP11310 421 aa21.28■■□□□ 1
TOP3A-219ENST00000584887 NCAM1P13591 858 aa21.28■■□□□ 1
TOP3A-219ENST00000584887 GNSP15586 552 aa21.28■■□□□ 1
TOP3A-219ENST00000584887 HLA-FP30511 346 aa21.28■■□□□ 1
TOP3A-219ENST00000584887 SGSHP51688 502 aa21.28■■□□□ 1
TOP3A-219ENST00000584887 ZNF132P52740 706 aa21.28■■□□□ 1
TOP3A-219ENST00000584887 KCNH2Q12809 1159 aa21.28■■□□□ 1
TOP3A-219ENST00000584887 ENPP2Q13822 863 aa21.28■■□□□ 1
TOP3A-219ENST00000584887 FAM124AQ86V42 546 aa21.28■■□□□ 1
TOP3A-219ENST00000584887 ZNF366Q8N895 744 aa21.28■■□□□ 1
TOP3A-219ENST00000584887 WFIKKN2Q8TEU8 576 aa21.28■■□□□ 1
TOP3A-219ENST00000584887 INTS2Q9H0H0 1204 aaKnown RBP21.28■■□□□ 1
TOP3A-219ENST00000584887 MIR1-1HGQ9H1L0 117 aa21.28■■□□□ 1
TOP3A-219ENST00000584887 ST7Q9NRC1 585 aa21.28■■□□□ 1
TOP3A-219ENST00000584887 SUSD2Q9UGT4 822 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms