RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 TMEM110-MUSTN1A8MSY1 372 aa12.1□□□□□ -0.47
CDRT1-207ENST00000583965 KCNU1A8MYU2 1149 aa12.1□□□□□ -0.47
CDRT1-207ENST00000583965 KIF5CO60282 957 aa12.1□□□□□ -0.47
CDRT1-207ENST00000583965 PRAMEF12O95522 483 aa12.1□□□□□ -0.47
CDRT1-207ENST00000583965 HMBSP08397 361 aa12.1□□□□□ -0.47
CDRT1-207ENST00000583965 KRT7P08729 469 aa12.1□□□□□ -0.47
CDRT1-207ENST00000583965 COMTP21964 271 aa12.1□□□□□ -0.47
CDRT1-207ENST00000583965 ADRA1BP35368 520 aa12.1□□□□□ -0.47
CDRT1-207ENST00000583965 SLC11A2P49281 568 aa12.1□□□□□ -0.47
CDRT1-207ENST00000583965 ATXN1P54253 815 aaKnown RBP12.1□□□□□ -0.47
CDRT1-207ENST00000583965 ZXDBP98169 803 aa12.1□□□□□ -0.47
CDRT1-207ENST00000583965 SCAPQ12770 1279 aa12.1□□□□□ -0.47
CDRT1-207ENST00000583965 ZNF77Q15935 545 aa12.1□□□□□ -0.47
CDRT1-207ENST00000583965 BOLA3Q53S33 107 aa12.1□□□□□ -0.47
CDRT1-207ENST00000583965 ZC3H12AQ5D1E8 599 aaKnown RBP12.1□□□□□ -0.47
CDRT1-207ENST00000583965 ERMARDQ5T6L9 678 aa12.1□□□□□ -0.47
CDRT1-207ENST00000583965 LRRC38Q5VT99 294 aa12.1□□□□□ -0.47
CDRT1-207ENST00000583965 SCYL2Q6P3W7 929 aa12.1□□□□□ -0.47
CDRT1-207ENST00000583965 HTR3DQ70Z44 454 aa12.1□□□□□ -0.47
CDRT1-207ENST00000583965 POLNQ7Z5Q5 900 aa12.1□□□□□ -0.47
CDRT1-207ENST00000583965 FAM131BQ86XD5 332 aa12.1□□□□□ -0.47
CDRT1-207ENST00000583965 ARFGAP1Q8N6T3 406 aa12.1□□□□□ -0.47
CDRT1-207ENST00000583965 TDRD5Q8NAT2 981 aaKnown RBP12.1□□□□□ -0.47
CDRT1-207ENST00000583965 ADAMTS19Q8TE59 1207 aa12.1□□□□□ -0.47
CDRT1-207ENST00000583965 TEKT4Q8WW24 435 aa12.1□□□□□ -0.47
CDRT1-207ENST00000583965 NXPE3Q969Y0 559 aa12.1□□□□□ -0.47
CDRT1-207ENST00000583965 ELSPBP1Q96BH3 223 aa12.1□□□□□ -0.47
CDRT1-207ENST00000583965 HAPLN3Q96S86 360 aa12.1□□□□□ -0.47
CDRT1-207ENST00000583965 CFAP97Q9P2B7 532 aa12.1□□□□□ -0.47
CDRT1-207ENST00000583965 TBC1D14Q9P2M4 693 aa12.1□□□□□ -0.47
CDRT1-207ENST00000583965 AMFRQ9UKV5 643 aa12.1□□□□□ -0.47
CDRT1-207ENST00000583965 CCL26Q9Y258 94 aa12.1□□□□□ -0.47
CDRT1-207ENST00000583965 MIF4GDA9UHW6 222 aaKnown RBP12.09□□□□□ -0.47
CDRT1-207ENST00000583965 SLC9A3R1O14745 358 aaPredicted RBP12.09□□□□□ -0.47
CDRT1-207ENST00000583965 PSTPIP1O43586 416 aa12.09□□□□□ -0.47
CDRT1-207ENST00000583965 ECI2O75521 394 aa12.09□□□□□ -0.47
CDRT1-207ENST00000583965 IRF1P10914 325 aa12.09□□□□□ -0.47
CDRT1-207ENST00000583965 TNNT1P13805 278 aa12.09□□□□□ -0.47
CDRT1-207ENST00000583965 FCARP24071 287 aa12.09□□□□□ -0.47
CDRT1-207ENST00000583965 CORO1AP31146 461 aaKnown RBP12.09□□□□□ -0.47
CDRT1-207ENST00000583965 SSR1P43307 286 aaKnown RBP12.09□□□□□ -0.47
CDRT1-207ENST00000583965 KCNQ1P51787 676 aa12.09□□□□□ -0.47
CDRT1-207ENST00000583965 ETF1P62495 437 aaKnown RBP12.09□□□□□ -0.47
CDRT1-207ENST00000583965 SLC25A11Q02978 314 aaKnown RBP12.09□□□□□ -0.47
CDRT1-207ENST00000583965 RAB6CQ53S08 254 aa12.09□□□□□ -0.47
CDRT1-207ENST00000583965 EFHC2Q5JST6 749 aa12.09□□□□□ -0.47
CDRT1-207ENST00000583965 Q6ZNB5 142 aa12.09□□□□□ -0.47
CDRT1-207ENST00000583965 PEX26Q7Z412 305 aa12.09□□□□□ -0.47
CDRT1-207ENST00000583965 NT5DC3Q86UY8 548 aa12.09□□□□□ -0.47
CDRT1-207ENST00000583965 RHOT1Q8IXI2 618 aa12.09□□□□□ -0.47
CDRT1-207ENST00000583965 ZDHHC14Q8IZN3 488 aa12.09□□□□□ -0.47
CDRT1-207ENST00000583965 BPIFB1Q8TDL5 484 aa12.09□□□□□ -0.47
CDRT1-207ENST00000583965 DEPDC1BQ8WUY9 529 aa12.09□□□□□ -0.47
CDRT1-207ENST00000583965 OTUB2Q96DC9 234 aa12.09□□□□□ -0.47
CDRT1-207ENST00000583965 C16orf45Q96MC5 204 aaPredicted RBP12.09□□□□□ -0.47
CDRT1-207ENST00000583965 DDX50Q9BQ39 737 aaKnown RBP12.09□□□□□ -0.47
CDRT1-207ENST00000583965 IRX2Q9BZI1 471 aaPredicted RBP12.09□□□□□ -0.47
CDRT1-207ENST00000583965 TKTL2Q9H0I9 626 aa12.09□□□□□ -0.47
CDRT1-207ENST00000583965 RAB6CQ9H0N0 254 aa12.09□□□□□ -0.47
CDRT1-207ENST00000583965 SMG9Q9H0W8 520 aaKnown RBP12.09□□□□□ -0.47
CDRT1-207ENST00000583965 OSBPL2Q9H1P3 480 aa12.09□□□□□ -0.47
CDRT1-207ENST00000583965 PCSK1NQ9UHG2 260 aa12.09□□□□□ -0.47
CDRT1-207ENST00000583965 FZD10Q9ULW2 581 aa12.09□□□□□ -0.47
CDRT1-207ENST00000583965 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.09□□□□□ -0.47
CDRT1-207ENST00000583965 SPTBN5Q9NRC6 3674 aaKnown RBP12.08□□□□□ -0.48
CDRT1-207ENST00000583965 CCDC66A2RUB6 948 aa12.08□□□□□ -0.48
CDRT1-207ENST00000583965 HEPACAM2A8MVW5 462 aa12.08□□□□□ -0.48
CDRT1-207ENST00000583965 C2CD4DB7Z1M9 353 aa12.08□□□□□ -0.48
CDRT1-207ENST00000583965 ANHXE9PGG2 379 aa12.08□□□□□ -0.48
CDRT1-207ENST00000583965 ACSL4O60488 711 aa12.08□□□□□ -0.48
CDRT1-207ENST00000583965 GREM1O60565 184 aa12.08□□□□□ -0.48
CDRT1-207ENST00000583965 MOCS2O96007 188 aaPredicted RBP12.08□□□□□ -0.48
CDRT1-207ENST00000583965 KLKB1P03952 638 aa12.08□□□□□ -0.48
CDRT1-207ENST00000583965 CTNNA2P26232 953 aa12.08□□□□□ -0.48
CDRT1-207ENST00000583965 CHKAP35790 457 aa12.08□□□□□ -0.48
CDRT1-207ENST00000583965 ZNF135P52742 658 aaPredicted RBP12.08□□□□□ -0.48
CDRT1-207ENST00000583965 TAS2R40P59535 323 aa12.08□□□□□ -0.48
CDRT1-207ENST00000583965 NRG1Q02297 640 aaPredicted RBP12.08□□□□□ -0.48
CDRT1-207ENST00000583965 TFF2Q03403 129 aa12.08□□□□□ -0.48
CDRT1-207ENST00000583965 ADGRF1Q5T601 910 aa12.08□□□□□ -0.48
CDRT1-207ENST00000583965 DAB2IPQ5VWQ8 1189 aa12.08□□□□□ -0.48
CDRT1-207ENST00000583965 TANGO2Q6ICL3 276 aa12.08□□□□□ -0.48
CDRT1-207ENST00000583965 CYP4V2Q6ZWL3 525 aaPredicted RBP12.08□□□□□ -0.48
CDRT1-207ENST00000583965 DENND1CQ8IV53 801 aa12.08□□□□□ -0.48
CDRT1-207ENST00000583965 MFSD6LQ8IWD5 586 aa12.08□□□□□ -0.48
CDRT1-207ENST00000583965 FAM217AQ8IXS0 508 aa12.08□□□□□ -0.48
CDRT1-207ENST00000583965 CPXM2Q8N436 756 aa12.08□□□□□ -0.48
CDRT1-207ENST00000583965 CCDC185Q8N715 623 aa12.08□□□□□ -0.48
CDRT1-207ENST00000583965 CD101Q93033 1021 aa12.08□□□□□ -0.48
CDRT1-207ENST00000583965 C1orf74Q96LT6 269 aa12.08□□□□□ -0.48
CDRT1-207ENST00000583965 PEBP4Q96S96 227 aa12.08□□□□□ -0.48
CDRT1-207ENST00000583965 SNRNP25Q9BV90 132 aaKnown RBP12.08□□□□□ -0.48
CDRT1-207ENST00000583965 GOLPH3Q9H4A6 298 aa12.08□□□□□ -0.48
CDRT1-207ENST00000583965 PRDM6Q9NQX0 595 aa12.08□□□□□ -0.48
CDRT1-207ENST00000583965 THG1LQ9NWX6 298 aaKnown RBP12.08□□□□□ -0.48
CDRT1-207ENST00000583965 DDX56Q9NY93 547 aaKnown RBP12.08□□□□□ -0.48
CDRT1-207ENST00000583965 PRKAG3Q9UGI9 489 aa12.08□□□□□ -0.48
CDRT1-207ENST00000583965 STOML2Q9UJZ1 356 aa12.08□□□□□ -0.48
CDRT1-207ENST00000583965 AGO1Q9UL18 857 aaKnown RBP12.08□□□□□ -0.48
CDRT1-207ENST00000583965 AP4E1Q9UPM8 1137 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms