RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 SCNN1AP37088 669 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 USP8P40818 1118 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 GABRB2P47870 512 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 PXNP49023 591 aaPredicted RBP10.3□□□□□ -0.76
SKA2-208ENST00000583927 SLC11A2P49281 568 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 TBX4P57082 545 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 ARHGAP8P85298 464 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 MYL5Q02045 173 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 SRSF5Q13243 272 aaKnown RBP10.3□□□□□ -0.76
SKA2-208ENST00000583927 MTA1Q13330 715 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 BYSLQ13895 437 aaKnown RBP10.3□□□□□ -0.76
SKA2-208ENST00000583927 DRAP1Q14919 205 aaPredicted RBP10.3□□□□□ -0.76
SKA2-208ENST00000583927 KRT31Q15323 416 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 CSRP2Q16527 193 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 PLK5Q496M5 336 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 FAM133BQ5BKY9 247 aaKnown RBP10.3□□□□□ -0.76
SKA2-208ENST00000583927 EFHC1Q5JVL4 640 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 PIK3R6Q5UE93 754 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 SDE2Q6IQ49 451 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 TOGARAM2Q6ZUX3 1019 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 ANKS1BQ7Z6G8 1248 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.3□□□□□ -0.76
SKA2-208ENST00000583927 SLC47A2Q86VL8 602 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 ZNF677Q86XU0 584 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 DCLK2Q8N568 766 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 CCDC33Q8N5R6 958 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.3□□□□□ -0.76
SKA2-208ENST00000583927 C1orf131Q8NDD1 294 aaKnown RBP10.3□□□□□ -0.76
SKA2-208ENST00000583927 MDGA1Q8NFP4 955 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 DQX1Q8TE96 717 aaKnown RBP10.3□□□□□ -0.76
SKA2-208ENST00000583927 DDI1Q8WTU0 396 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 FAM149B1Q96BN6 582 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 TMA16Q96EY4 203 aaKnown RBP10.3□□□□□ -0.76
SKA2-208ENST00000583927 PPP1R13BQ96KQ4 1090 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 FCRL2Q96LA5 508 aaPredicted RBP10.3□□□□□ -0.76
SKA2-208ENST00000583927 SLC2A13Q96QE2 648 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 CPXM1Q96SM3 734 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 DDX50Q9BQ39 737 aaKnown RBP10.3□□□□□ -0.76
SKA2-208ENST00000583927 HINFPQ9BQA5 517 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 BPIFA3Q9BQP9 254 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 MIS12Q9H081 205 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 DUSP15Q9H1R2 295 aaPredicted RBP10.3□□□□□ -0.76
SKA2-208ENST00000583927 POLR3BQ9NW08 1133 aaPredicted RBP10.3□□□□□ -0.76
SKA2-208ENST00000583927 PLK2Q9NYY3 685 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 THAP10Q9P2Z0 257 aaPredicted RBP10.3□□□□□ -0.76
SKA2-208ENST00000583927 LIMA1Q9UHB6 759 aaKnown RBP10.3□□□□□ -0.76
SKA2-208ENST00000583927 CEP83Q9Y592 693 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 FHOD1Q9Y613 1164 aa10.3□□□□□ -0.76
SKA2-208ENST00000583927 A0A1W2PQF6 199 aa10.29□□□□□ -0.76
SKA2-208ENST00000583927 PIK3R2O00459 728 aa10.29□□□□□ -0.76
SKA2-208ENST00000583927 CAPN9O14815 690 aa10.29□□□□□ -0.76
SKA2-208ENST00000583927 MSI1O43347 362 aaKnown RBP10.29□□□□□ -0.76
SKA2-208ENST00000583927 ACSL4O60488 711 aa10.29□□□□□ -0.76
SKA2-208ENST00000583927 HSF2BPO75031 334 aa10.29□□□□□ -0.76
SKA2-208ENST00000583927 RHOBTB1O94844 696 aa10.29□□□□□ -0.76
SKA2-208ENST00000583927 LSM8O95777 96 aaKnown RBP10.29□□□□□ -0.76
SKA2-208ENST00000583927 CYP11B1P15538 503 aa10.29□□□□□ -0.76
SKA2-208ENST00000583927 P2RY2P41231 377 aa10.29□□□□□ -0.76
SKA2-208ENST00000583927 LMNB2Q03252 620 aa10.29□□□□□ -0.76
SKA2-208ENST00000583927 NCAPHQ15003 741 aa10.29□□□□□ -0.76
SKA2-208ENST00000583927 ELF2Q15723 593 aa10.29□□□□□ -0.76
SKA2-208ENST00000583927 HSP90AA4PQ58FG1 418 aa10.29□□□□□ -0.76
SKA2-208ENST00000583927 PLA2G2CQ5R387 149 aa10.29□□□□□ -0.76
SKA2-208ENST00000583927 SYPL2Q5VXT5 272 aa10.29□□□□□ -0.76
SKA2-208ENST00000583927 EGFLAMQ63HQ2 1017 aa10.29□□□□□ -0.76
SKA2-208ENST00000583927 C11orf57Q6ZUT1 292 aaPredicted RBP10.29□□□□□ -0.76
SKA2-208ENST00000583927 SLC26A9Q7LBE3 791 aa10.29□□□□□ -0.76
SKA2-208ENST00000583927 METTL3Q86U44 580 aaKnown RBP10.29□□□□□ -0.76
SKA2-208ENST00000583927 KBTBD6Q86V97 674 aa10.29□□□□□ -0.76
SKA2-208ENST00000583927 KIAA2013Q8IYS2 634 aa10.29□□□□□ -0.76
SKA2-208ENST00000583927 TMEM35BQ8NCS4 154 aa10.29□□□□□ -0.76
SKA2-208ENST00000583927 ANKRD20A12PQ8NF67 263 aa10.29□□□□□ -0.76
SKA2-208ENST00000583927 WFIKKN2Q8TEU8 576 aa10.29□□□□□ -0.76
SKA2-208ENST00000583927 UCMAQ8WVF2 138 aa10.29□□□□□ -0.76
SKA2-208ENST00000583927 DDX1Q92499 740 aaKnown RBP10.29□□□□□ -0.76
SKA2-208ENST00000583927 BTN2A3PQ96KV6 586 aa10.29□□□□□ -0.76
SKA2-208ENST00000583927 GANQ9H2C0 597 aa10.29□□□□□ -0.76
SKA2-208ENST00000583927 FANCLQ9NW38 375 aa10.29□□□□□ -0.76
SKA2-208ENST00000583927 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.29□□□□□ -0.76
SKA2-208ENST00000583927 ELOVL2Q9NXB9 296 aa10.29□□□□□ -0.76
SKA2-208ENST00000583927 DLL3Q9NYJ7 618 aa10.29□□□□□ -0.76
SKA2-208ENST00000583927 RRN3Q9NYV6 651 aa10.29□□□□□ -0.76
SKA2-208ENST00000583927 NAALADL1Q9UQQ1 740 aa10.29□□□□□ -0.76
SKA2-208ENST00000583927 SIK3Q9Y2K2 1263 aa10.29□□□□□ -0.76
SKA2-208ENST00000583927 NUMA1Q14980 2115 aa10.28□□□□□ -0.76
SKA2-208ENST00000583927 ASCC3Q8N3C0 2202 aaKnown RBP10.28□□□□□ -0.76
SKA2-208ENST00000583927 F8VZ95 297 aa10.28□□□□□ -0.76
SKA2-208ENST00000583927 PES1O00541 588 aaKnown RBP10.28□□□□□ -0.76
SKA2-208ENST00000583927 TRUB2O95900 331 aaKnown RBP10.28□□□□□ -0.76
SKA2-208ENST00000583927 ZNF806P0C7X5 589 aa10.28□□□□□ -0.76
SKA2-208ENST00000583927 SLC2A3P11169 496 aa10.28□□□□□ -0.76
SKA2-208ENST00000583927 HOXB2P14652 356 aa10.28□□□□□ -0.76
SKA2-208ENST00000583927 HLA-FP30511 346 aa10.28□□□□□ -0.76
SKA2-208ENST00000583927 ID4P47928 161 aa10.28□□□□□ -0.76
SKA2-208ENST00000583927 COPB1P53618 953 aaKnown RBP10.28□□□□□ -0.76
SKA2-208ENST00000583927 JAM2P57087 298 aa10.28□□□□□ -0.76
SKA2-208ENST00000583927 SLC6A3Q01959 620 aa10.28□□□□□ -0.76
SKA2-208ENST00000583927 TYRO3Q06418 890 aa10.28□□□□□ -0.76
SKA2-208ENST00000583927 RAPGEF1Q13905 1077 aa10.28□□□□□ -0.76
SKA2-208ENST00000583927 GEN1Q17RS7 908 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms