RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 ABHD14A-ACY1A0A1B0GW23 586 aa15.14■□□□□ 0.01
MKS1-211ENST00000581761 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.14■□□□□ 0.01
MKS1-211ENST00000581761 BCLAF3A2AJT9 711 aaKnown RBP15.14■□□□□ 0.01
MKS1-211ENST00000581761 KCNN4O15554 427 aa15.14■□□□□ 0.01
MKS1-211ENST00000581761 BAIAP3O94812 1187 aa15.14■□□□□ 0.01
MKS1-211ENST00000581761 MAP3K6O95382 1288 aa15.14■□□□□ 0.01
MKS1-211ENST00000581761 ACTN2P35609 894 aa15.14■□□□□ 0.01
MKS1-211ENST00000581761 PBX2P40425 430 aa15.14■□□□□ 0.01
MKS1-211ENST00000581761 CXCR3P49682 368 aa15.14■□□□□ 0.01
MKS1-211ENST00000581761 XRCC4Q13426 336 aa15.14■□□□□ 0.01
MKS1-211ENST00000581761 SLC29A2Q14542 456 aa15.14■□□□□ 0.01
MKS1-211ENST00000581761 DDR2Q16832 855 aa15.14■□□□□ 0.01
MKS1-211ENST00000581761 RTP2Q5QGT7 225 aa15.14■□□□□ 0.01
MKS1-211ENST00000581761 HOOK3Q86VS8 718 aa15.14■□□□□ 0.01
MKS1-211ENST00000581761 TMEM173Q86WV6 379 aaPredicted RBP15.14■□□□□ 0.01
MKS1-211ENST00000581761 PPIL6Q8IXY8 311 aa15.14■□□□□ 0.01
MKS1-211ENST00000581761 NUP93Q8N1F7 819 aa15.14■□□□□ 0.01
MKS1-211ENST00000581761 TAB3Q8N5C8 712 aaPredicted RBP15.14■□□□□ 0.01
MKS1-211ENST00000581761 UHMK1Q8TAS1 419 aaKnown RBP15.14■□□□□ 0.01
MKS1-211ENST00000581761 PRCCQ92733 491 aaPredicted RBP15.14■□□□□ 0.01
MKS1-211ENST00000581761 RNF34Q969K3 372 aa15.14■□□□□ 0.01
MKS1-211ENST00000581761 ATP6V1G3Q96LB4 118 aa15.14■□□□□ 0.01
MKS1-211ENST00000581761 QKIQ96PU8 341 aaKnown RBP eCLIP15.14■□□□□ 0.01
MKS1-211ENST00000581761 TTPALQ9BTX7 342 aa15.14■□□□□ 0.01
MKS1-211ENST00000581761 OXCT2Q9BYC2 517 aaPredicted RBP15.14■□□□□ 0.01
MKS1-211ENST00000581761 ETNK2Q9NVF9 386 aa15.14■□□□□ 0.01
MKS1-211ENST00000581761 NINJ2Q9NZG7 142 aa15.14■□□□□ 0.01
MKS1-211ENST00000581761 PAK5Q9P286 719 aa15.14■□□□□ 0.01
MKS1-211ENST00000581761 MFHAS1Q9Y4C4 1052 aa15.14■□□□□ 0.01
MKS1-211ENST00000581761 SLC4A7Q9Y6M7 1214 aa15.14■□□□□ 0.01
MKS1-211ENST00000581761 COL4A4P53420 1690 aaPredicted RBP15.13■□□□□ 0.01
MKS1-211ENST00000581761 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.13■□□□□ 0.01
MKS1-211ENST00000581761 A0A1W2PQH9 124 aa15.13■□□□□ 0.01
MKS1-211ENST00000581761 MTMR11A4FU01 709 aa15.13■□□□□ 0.01
MKS1-211ENST00000581761 SHBGP04278 402 aa15.13■□□□□ 0.01
MKS1-211ENST00000581761 RBL1P28749 1068 aa15.13■□□□□ 0.01
MKS1-211ENST00000581761 TPI1P60174 286 aa15.13■□□□□ 0.01
MKS1-211ENST00000581761 UBAP2Q5T6F2 1119 aaKnown RBP15.13■□□□□ 0.01
MKS1-211ENST00000581761 AGBL2Q5U5Z8 902 aa15.13■□□□□ 0.01
MKS1-211ENST00000581761 KCTD16Q68DU8 428 aa15.13■□□□□ 0.01
MKS1-211ENST00000581761 RFX8Q6ZV50 586 aa15.13■□□□□ 0.01
MKS1-211ENST00000581761 ANKS3Q6ZW76 656 aa15.13■□□□□ 0.01
MKS1-211ENST00000581761 BZW1Q7L1Q6 419 aaKnown RBP15.13■□□□□ 0.01
MKS1-211ENST00000581761 TAS1R1Q7RTX1 841 aa15.13■□□□□ 0.01
MKS1-211ENST00000581761 SCD5Q86SK9 330 aa15.13■□□□□ 0.01
MKS1-211ENST00000581761 ATAD1Q8NBU5 361 aa15.13■□□□□ 0.01
MKS1-211ENST00000581761 SPPL2BQ8TCT7 592 aa15.13■□□□□ 0.01
MKS1-211ENST00000581761 CPT1BQ92523 772 aa15.13■□□□□ 0.01
MKS1-211ENST00000581761 PBX4Q9BYU1 374 aa15.13■□□□□ 0.01
MKS1-211ENST00000581761 TKTL2Q9H0I9 626 aa15.13■□□□□ 0.01
MKS1-211ENST00000581761 FBXO44Q9H4M3 255 aa15.13■□□□□ 0.01
MKS1-211ENST00000581761 WDCPQ9H6R7 721 aa15.13■□□□□ 0.01
MKS1-211ENST00000581761 CWH43Q9H720 699 aa15.13■□□□□ 0.01
MKS1-211ENST00000581761 USP29Q9HBJ7 922 aa15.13■□□□□ 0.01
MKS1-211ENST00000581761 SAYSD1Q9NPB0 183 aa15.13■□□□□ 0.01
MKS1-211ENST00000581761 ANLNQ9NQW6 1124 aa15.13■□□□□ 0.01
MKS1-211ENST00000581761 SCML2Q9UQR0 700 aa15.13■□□□□ 0.01
MKS1-211ENST00000581761 FARP1Q9Y4F1 1045 aaPredicted RBP15.13■□□□□ 0.01
MKS1-211ENST00000581761 UNC80Q8N2C7 3258 aa15.13■□□□□ 0.01
MKS1-211ENST00000581761 HMGB1P1B2RPK0 211 aaPredicted RBP15.12■□□□□ 0.01
MKS1-211ENST00000581761 SMAPO00193 183 aa15.12■□□□□ 0.01
MKS1-211ENST00000581761 IRAK2O43187 625 aa15.12■□□□□ 0.01
MKS1-211ENST00000581761 MFSD11O43934 449 aa15.12■□□□□ 0.01
MKS1-211ENST00000581761 TBC1D4O60343 1298 aa15.12■□□□□ 0.01
MKS1-211ENST00000581761 DGKIO75912 1065 aa15.12■□□□□ 0.01
MKS1-211ENST00000581761 ACSL3O95573 720 aa15.12■□□□□ 0.01
MKS1-211ENST00000581761 AMHP03971 560 aa15.12■□□□□ 0.01
MKS1-211ENST00000581761 MYOGP15173 224 aa15.12■□□□□ 0.01
MKS1-211ENST00000581761 ATP2A2P16615 1042 aaKnown RBP15.12■□□□□ 0.01
MKS1-211ENST00000581761 MAGEA4P43358 317 aa15.12■□□□□ 0.01
MKS1-211ENST00000581761 ALDH7A1P49419 539 aaKnown RBP15.12■□□□□ 0.01
MKS1-211ENST00000581761 BASP1P80723 227 aaKnown RBP15.12■□□□□ 0.01
MKS1-211ENST00000581761 SMARCB1Q12824 385 aa15.12■□□□□ 0.01
MKS1-211ENST00000581761 SLC10A2Q12908 348 aaPredicted RBP15.12■□□□□ 0.01
MKS1-211ENST00000581761 GPR17Q13304 367 aa15.12■□□□□ 0.01
MKS1-211ENST00000581761 DPYSQ14117 519 aa15.12■□□□□ 0.01
MKS1-211ENST00000581761 TERF2Q15554 542 aa15.12■□□□□ 0.01
MKS1-211ENST00000581761 SLC45A4Q5BKX6 768 aa15.12■□□□□ 0.01
MKS1-211ENST00000581761 SPOUT1Q5T280 376 aaKnown RBP15.12■□□□□ 0.01
MKS1-211ENST00000581761 ANKRD22Q5VYY1 191 aa15.12■□□□□ 0.01
MKS1-211ENST00000581761 KCNT2Q6UVM3 1135 aa15.12■□□□□ 0.01
MKS1-211ENST00000581761 PRSS55Q6UWB4 352 aaPredicted RBP15.12■□□□□ 0.01
MKS1-211ENST00000581761 RSPO2Q6UXX9 243 aaPredicted RBP15.12■□□□□ 0.01
MKS1-211ENST00000581761 CROCCP2Q86T23 111 aa15.12■□□□□ 0.01
MKS1-211ENST00000581761 ARHGAP18Q8N392 663 aa15.12■□□□□ 0.01
MKS1-211ENST00000581761 SH2D3CQ8N5H7 860 aa15.12■□□□□ 0.01
MKS1-211ENST00000581761 CCDC33Q8N5R6 958 aa15.12■□□□□ 0.01
MKS1-211ENST00000581761 STKLD1Q8NE28 680 aa15.12■□□□□ 0.01
MKS1-211ENST00000581761 RTP4Q96DX8 246 aa15.12■□□□□ 0.01
MKS1-211ENST00000581761 RBM15Q96T37 977 aaKnown RBP eCLIP15.12■□□□□ 0.01
MKS1-211ENST00000581761 SEPT5Q99719 369 aaPredicted RBP15.12■□□□□ 0.01
MKS1-211ENST00000581761 EPAS1Q99814 870 aa15.12■□□□□ 0.01
MKS1-211ENST00000581761 MTIF3Q9H2K0 278 aaKnown RBP15.12■□□□□ 0.01
MKS1-211ENST00000581761 NMUR1Q9HB89 426 aa15.12■□□□□ 0.01
MKS1-211ENST00000581761 DTLQ9NZJ0 730 aa15.12■□□□□ 0.01
MKS1-211ENST00000581761 BCCIPQ9P287 314 aaKnown RBP eCLIP15.12■□□□□ 0.01
MKS1-211ENST00000581761 ADAM21Q9UKJ8 722 aa15.12■□□□□ 0.01
MKS1-211ENST00000581761 YBX2Q9Y2T7 364 aaKnown RBP15.12■□□□□ 0.01
MKS1-211ENST00000581761 SNX10Q9Y5X0 201 aa15.12■□□□□ 0.01
MKS1-211ENST00000581761 PRUNE2Q8WUY3 3088 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms