RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 SYT13Q7L8C5 426 aa17.07■□□□□ 0.32
IFT20-210ENST00000580357 TRMT11Q7Z4G4 463 aaKnown RBP17.07■□□□□ 0.32
IFT20-210ENST00000580357 IRF2BP2Q7Z5L9 587 aa17.07■□□□□ 0.32
IFT20-210ENST00000580357 C12orf40Q86WS4 652 aa17.07■□□□□ 0.32
IFT20-210ENST00000580357 XYLT1Q86Y38 959 aa17.07■□□□□ 0.32
IFT20-210ENST00000580357 CAMKK1Q8N5S9 505 aa17.07■□□□□ 0.32
IFT20-210ENST00000580357 USP33Q8TEY7 942 aa17.07■□□□□ 0.32
IFT20-210ENST00000580357 SLC20A1Q8WUM9 679 aa17.07■□□□□ 0.32
IFT20-210ENST00000580357 ATRIPQ8WXE1 791 aa17.07■□□□□ 0.32
IFT20-210ENST00000580357 BAP1Q92560 729 aa17.07■□□□□ 0.32
IFT20-210ENST00000580357 RNF34Q969K3 372 aa17.07■□□□□ 0.32
IFT20-210ENST00000580357 BTN2A3PQ96KV6 586 aa17.07■□□□□ 0.32
IFT20-210ENST00000580357 FCRL2Q96LA5 508 aaPredicted RBP17.07■□□□□ 0.32
IFT20-210ENST00000580357 STAP1Q9ULZ2 295 aa17.07■□□□□ 0.32
IFT20-210ENST00000580357 SLC27A6Q9Y2P4 619 aa17.07■□□□□ 0.32
IFT20-210ENST00000580357 STARD13Q9Y3M8 1113 aa17.07■□□□□ 0.32
IFT20-210ENST00000580357 PAXBP1Q9Y5B6 917 aa17.07■□□□□ 0.32
IFT20-210ENST00000580357 PCDHGA2Q9Y5H1 932 aa17.07■□□□□ 0.32
IFT20-210ENST00000580357 PTPRZ1P23471 2315 aaPredicted RBP17.07■□□□□ 0.32
IFT20-210ENST00000580357 A0A1W2PQJ5 194 aa17.06■□□□□ 0.32
IFT20-210ENST00000580357 TYW5A2RUC4 315 aaKnown RBP17.06■□□□□ 0.32
IFT20-210ENST00000580357 IGLV3-25P01717 112 aa17.06■□□□□ 0.32
IFT20-210ENST00000580357 CISD3P0C7P0 127 aa17.06■□□□□ 0.32
IFT20-210ENST00000580357 UNGP13051 313 aaPredicted RBP17.06■□□□□ 0.32
IFT20-210ENST00000580357 ABCB4P21439 1286 aa17.06■□□□□ 0.32
IFT20-210ENST00000580357 CCR1P32246 355 aa17.06■□□□□ 0.32
IFT20-210ENST00000580357 NSFP46459 744 aaKnown RBP17.06■□□□□ 0.32
IFT20-210ENST00000580357 SND1Q7KZF4 910 aaKnown RBP eCLIP17.06■□□□□ 0.32
IFT20-210ENST00000580357 TAC4Q86UU9 113 aa17.06■□□□□ 0.32
IFT20-210ENST00000580357 PHTF2Q8N3S3 785 aa17.06■□□□□ 0.32
IFT20-210ENST00000580357 TERB1Q8NA31 727 aa17.06■□□□□ 0.32
IFT20-210ENST00000580357 RPLP0P6Q8NHW5 317 aa17.06■□□□□ 0.32
IFT20-210ENST00000580357 NELL1Q92832 810 aa17.06■□□□□ 0.32
IFT20-210ENST00000580357 BZW2Q9Y6E2 419 aaKnown RBP17.06■□□□□ 0.32
IFT20-210ENST00000580357 CCDC163A0A0D9SF12 145 aa17.05■□□□□ 0.32
IFT20-210ENST00000580357 NPC1O15118 1278 aa17.05■□□□□ 0.32
IFT20-210ENST00000580357 GRAP2O75791 330 aa17.05■□□□□ 0.32
IFT20-210ENST00000580357 CALB1P05937 261 aa17.05■□□□□ 0.32
IFT20-210ENST00000580357 CNR2P34972 360 aa17.05■□□□□ 0.32
IFT20-210ENST00000580357 RNASE9P60153 205 aaKnown RBP17.05■□□□□ 0.32
IFT20-210ENST00000580357 SATB1Q01826 763 aa17.05■□□□□ 0.32
IFT20-210ENST00000580357 CENPCQ03188 943 aa17.05■□□□□ 0.32
IFT20-210ENST00000580357 ASIC2Q16515 512 aa17.05■□□□□ 0.32
IFT20-210ENST00000580357 CLEC16AQ2KHT3 1053 aa17.05■□□□□ 0.32
IFT20-210ENST00000580357 SLC25A52Q3SY17 297 aa17.05■□□□□ 0.32
IFT20-210ENST00000580357 FAM102AQ5T9C2 384 aaPredicted RBP17.05■□□□□ 0.32
IFT20-210ENST00000580357 PIK3R6Q5UE93 754 aa17.05■□□□□ 0.32
IFT20-210ENST00000580357 SDE2Q6IQ49 451 aa17.05■□□□□ 0.32
IFT20-210ENST00000580357 PHF13Q86YI8 300 aaPredicted RBP17.05■□□□□ 0.32
IFT20-210ENST00000580357 CCDC117Q8IWD4 279 aaPredicted RBP17.05■□□□□ 0.32
IFT20-210ENST00000580357 SYN2Q92777 582 aaPredicted RBP17.05■□□□□ 0.32
IFT20-210ENST00000580357 EZH1Q92800 747 aaPredicted RBP17.05■□□□□ 0.32
IFT20-210ENST00000580357 NT5C3BQ969T7 300 aa17.05■□□□□ 0.32
IFT20-210ENST00000580357 PGAP3Q96FM1 320 aaPredicted RBP17.05■□□□□ 0.32
IFT20-210ENST00000580357 PIWIL1Q96J94 861 aaKnown RBP17.05■□□□□ 0.32
IFT20-210ENST00000580357 FAM204AQ9H8W3 233 aa17.05■□□□□ 0.32
IFT20-210ENST00000580357 SEPT11Q9NVA2 429 aaKnown RBP17.05■□□□□ 0.32
IFT20-210ENST00000580357 DDIT4Q9NX09 232 aa17.05■□□□□ 0.32
IFT20-210ENST00000580357 PLK2Q9NYY3 685 aa17.05■□□□□ 0.32
IFT20-210ENST00000580357 ADAM22Q9P0K1 906 aa17.05■□□□□ 0.32
IFT20-210ENST00000580357 IFNKQ9P0W0 207 aa17.05■□□□□ 0.32
IFT20-210ENST00000580357 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.05■□□□□ 0.32
IFT20-210ENST00000580357 CACNA1IQ9P0X4 2223 aa17.04■□□□□ 0.32
IFT20-210ENST00000580357 LRRC53A6NM62 1247 aa17.04■□□□□ 0.32
IFT20-210ENST00000580357 KCNU1A8MYU2 1149 aa17.04■□□□□ 0.32
IFT20-210ENST00000580357 M0QYT0 321 aa17.04■□□□□ 0.32
IFT20-210ENST00000580357 GFRA2O00451 464 aa17.04■□□□□ 0.32
IFT20-210ENST00000580357 PBX1P40424 430 aa17.04■□□□□ 0.32
IFT20-210ENST00000580357 PRKCIP41743 596 aa17.04■□□□□ 0.32
IFT20-210ENST00000580357 KIR2DL1P43626 348 aaPredicted RBP17.04■□□□□ 0.32
IFT20-210ENST00000580357 SEC13P55735 322 aa17.04■□□□□ 0.32
IFT20-210ENST00000580357 KDSRQ06136 332 aa17.04■□□□□ 0.32
IFT20-210ENST00000580357 C2orf27AQ580R0 203 aa17.04■□□□□ 0.32
IFT20-210ENST00000580357 ZC3H12AQ5D1E8 599 aaKnown RBP17.04■□□□□ 0.32
IFT20-210ENST00000580357 EOGTQ5NDL2 527 aa17.04■□□□□ 0.32
IFT20-210ENST00000580357 BRMS1LQ5PSV4 323 aa17.04■□□□□ 0.32
IFT20-210ENST00000580357 ZBTB44Q8NCP5 570 aa17.04■□□□□ 0.32
IFT20-210ENST00000580357 ADAM32Q8TC27 787 aa17.04■□□□□ 0.32
IFT20-210ENST00000580357 UCMAQ8WVF2 138 aa17.04■□□□□ 0.32
IFT20-210ENST00000580357 BHMTQ93088 406 aa17.04■□□□□ 0.32
IFT20-210ENST00000580357 VCPIP1Q96JH7 1222 aa17.04■□□□□ 0.32
IFT20-210ENST00000580357 NPY6RQ99463 290 aa17.04■□□□□ 0.32
IFT20-210ENST00000580357 TMEM59LQ9UK28 342 aa17.04■□□□□ 0.32
IFT20-210ENST00000580357 MMP17Q9ULZ9 603 aa17.04■□□□□ 0.32
IFT20-210ENST00000580357 MYOFQ9NZM1 2061 aa17.04■□□□□ 0.32
IFT20-210ENST00000580357 K7ESF4 209 aa17.03■□□□□ 0.32
IFT20-210ENST00000580357 GFRA3O60609 400 aa17.03■□□□□ 0.32
IFT20-210ENST00000580357 TSPAN3O60637 253 aa17.03■□□□□ 0.32
IFT20-210ENST00000580357 TDGF1P13385 188 aa17.03■□□□□ 0.32
IFT20-210ENST00000580357 TIE1P35590 1138 aa17.03■□□□□ 0.32
IFT20-210ENST00000580357 GSCP56915 257 aaPredicted RBP17.03■□□□□ 0.32
IFT20-210ENST00000580357 ZBED6P86452 979 aa17.03■□□□□ 0.32
IFT20-210ENST00000580357 C1QBPQ07021 282 aaKnown RBP17.03■□□□□ 0.32
IFT20-210ENST00000580357 KLHL30Q0D2K2 578 aa17.03■□□□□ 0.32
IFT20-210ENST00000580357 DMC1Q14565 340 aa17.03■□□□□ 0.32
IFT20-210ENST00000580357 C10orf76Q5T2E6 689 aa17.03■□□□□ 0.32
IFT20-210ENST00000580357 ACAD10Q6JQN1 1059 aa17.03■□□□□ 0.32
IFT20-210ENST00000580357 MMS22LQ6ZRQ5 1243 aa17.03■□□□□ 0.32
IFT20-210ENST00000580357 LONP2Q86WA8 852 aa17.03■□□□□ 0.32
IFT20-210ENST00000580357 SLC30A5Q8TAD4 765 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms