RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 MDM4O15151 490 aa13.99□□□□□ -0.17
TRAF4-214ENST00000580073 TIMM44O43615 452 aa13.99□□□□□ -0.17
TRAF4-214ENST00000580073 CISD3P0C7P0 127 aa13.99□□□□□ -0.17
TRAF4-214ENST00000580073 TRIM49P0CI25 452 aa13.99□□□□□ -0.17
TRAF4-214ENST00000580073 TRIM49CP0CI26 452 aa13.99□□□□□ -0.17
TRAF4-214ENST00000580073 EPB41P11171 864 aaKnown RBP13.99□□□□□ -0.17
TRAF4-214ENST00000580073 GCLMP48507 274 aa13.99□□□□□ -0.17
TRAF4-214ENST00000580073 HARS2P49590 506 aaKnown RBP13.99□□□□□ -0.17
TRAF4-214ENST00000580073 MXI1P50539 228 aa13.99□□□□□ -0.17
TRAF4-214ENST00000580073 FKBP3Q00688 224 aaKnown RBP13.99□□□□□ -0.17
TRAF4-214ENST00000580073 PPP3CAQ08209 521 aa13.99□□□□□ -0.17
TRAF4-214ENST00000580073 PDE4CQ08493 712 aa13.99□□□□□ -0.17
TRAF4-214ENST00000580073 EFEMP1Q12805 493 aa13.99□□□□□ -0.17
TRAF4-214ENST00000580073 STIM1Q13586 685 aa13.99□□□□□ -0.17
TRAF4-214ENST00000580073 ENPP2Q13822 863 aa13.99□□□□□ -0.17
TRAF4-214ENST00000580073 TRIP6Q15654 476 aaKnown RBP13.99□□□□□ -0.17
TRAF4-214ENST00000580073 FUT11Q495W5 492 aa13.99□□□□□ -0.17
TRAF4-214ENST00000580073 PPP1R26Q5T8A7 1209 aaPredicted RBP13.99□□□□□ -0.17
TRAF4-214ENST00000580073 FYB2Q5VWT5 728 aa13.99□□□□□ -0.17
TRAF4-214ENST00000580073 FOXR2Q6PJQ5 311 aa13.99□□□□□ -0.17
TRAF4-214ENST00000580073 SERPINA13PQ6UXR4 307 aa13.99□□□□□ -0.17
TRAF4-214ENST00000580073 RAB44Q7Z6P3 723 aaPredicted RBP13.99□□□□□ -0.17
TRAF4-214ENST00000580073 FBXL13Q8NEE6 735 aa13.99□□□□□ -0.17
TRAF4-214ENST00000580073 TAS1R2Q8TE23 839 aa13.99□□□□□ -0.17
TRAF4-214ENST00000580073 WFIKKN2Q8TEU8 576 aa13.99□□□□□ -0.17
TRAF4-214ENST00000580073 DDI1Q8WTU0 396 aa13.99□□□□□ -0.17
TRAF4-214ENST00000580073 TOE1Q96GM8 510 aaKnown RBP13.99□□□□□ -0.17
TRAF4-214ENST00000580073 NUP58Q9BVL2 599 aa13.99□□□□□ -0.17
TRAF4-214ENST00000580073 FSCN3Q9NQT6 498 aa13.99□□□□□ -0.17
TRAF4-214ENST00000580073 MARCH2Q9P0N8 246 aa13.99□□□□□ -0.17
TRAF4-214ENST00000580073 RWDD2AQ9UIY3 292 aa13.99□□□□□ -0.17
TRAF4-214ENST00000580073 KLK13Q9UKR3 277 aa13.99□□□□□ -0.17
TRAF4-214ENST00000580073 HCN2Q9UL51 889 aa13.99□□□□□ -0.17
TRAF4-214ENST00000580073 ADAMTS20P59510 1910 aa13.98□□□□□ -0.17
TRAF4-214ENST00000580073 CETN3O15182 167 aa13.98□□□□□ -0.17
TRAF4-214ENST00000580073 BCAT2O15382 392 aaPredicted RBP13.98□□□□□ -0.17
TRAF4-214ENST00000580073 LATS1O95835 1130 aa13.98□□□□□ -0.17
TRAF4-214ENST00000580073 IGLV3-19P01714 112 aa13.98□□□□□ -0.17
TRAF4-214ENST00000580073 CD59P13987 128 aa13.98□□□□□ -0.17
TRAF4-214ENST00000580073 PPP1R2P41236 205 aa13.98□□□□□ -0.17
TRAF4-214ENST00000580073 MATKP42679 507 aa13.98□□□□□ -0.17
TRAF4-214ENST00000580073 IL12RB1P42701 662 aa13.98□□□□□ -0.17
TRAF4-214ENST00000580073 PGFP49763 221 aa13.98□□□□□ -0.17
TRAF4-214ENST00000580073 BCAT1P54687 386 aa13.98□□□□□ -0.17
TRAF4-214ENST00000580073 YWHAGP61981 247 aaKnown RBP eCLIP13.98□□□□□ -0.17
TRAF4-214ENST00000580073 GLRX5Q86SX6 157 aa13.98□□□□□ -0.17
TRAF4-214ENST00000580073 ADAMTS14Q8WXS8 1223 aa13.98□□□□□ -0.17
TRAF4-214ENST00000580073 DNASE2BQ8WZ79 361 aa13.98□□□□□ -0.17
TRAF4-214ENST00000580073 TMEM176AQ96HP8 235 aa13.98□□□□□ -0.17
TRAF4-214ENST00000580073 TSG101Q99816 390 aa13.98□□□□□ -0.17
TRAF4-214ENST00000580073 SRRTQ9BXP5 876 aaKnown RBP13.98□□□□□ -0.17
TRAF4-214ENST00000580073 CIPCQ9C0C6 399 aa13.98□□□□□ -0.17
TRAF4-214ENST00000580073 APOBEC3GQ9HC16 384 aaKnown RBP13.98□□□□□ -0.17
TRAF4-214ENST00000580073 WSB2Q9NYS7 404 aaPredicted RBP13.98□□□□□ -0.17
TRAF4-214ENST00000580073 HESX1Q9UBX0 185 aa13.98□□□□□ -0.17
TRAF4-214ENST00000580073 NUDT5Q9UKK9 219 aa13.98□□□□□ -0.17
TRAF4-214ENST00000580073 PLXNB3Q9ULL4 1909 aa13.98□□□□□ -0.17
TRAF4-214ENST00000580073 FLRT2O43155 660 aa13.97□□□□□ -0.17
TRAF4-214ENST00000580073 GJB3O75712 270 aa13.97□□□□□ -0.17
TRAF4-214ENST00000580073 TOP3BO95985 862 aaKnown RBP13.97□□□□□ -0.17
TRAF4-214ENST00000580073 HMBSP08397 361 aa13.97□□□□□ -0.17
TRAF4-214ENST00000580073 FTH1P19P0C7X4 201 aa13.97□□□□□ -0.17
TRAF4-214ENST00000580073 TYRO3Q06418 890 aa13.97□□□□□ -0.17
TRAF4-214ENST00000580073 ZNF234Q14588 700 aa13.97□□□□□ -0.17
TRAF4-214ENST00000580073 TEAD4Q15561 434 aa13.97□□□□□ -0.17
TRAF4-214ENST00000580073 INAVAQ3KP66 663 aa13.97□□□□□ -0.17
TRAF4-214ENST00000580073 TTC31Q49AM3 519 aaPredicted RBP13.97□□□□□ -0.17
TRAF4-214ENST00000580073 MPPE1Q53F39 396 aa13.97□□□□□ -0.17
TRAF4-214ENST00000580073 ZNF394Q53GI3 561 aa13.97□□□□□ -0.17
TRAF4-214ENST00000580073 RAB41Q5JT25 222 aa13.97□□□□□ -0.17
TRAF4-214ENST00000580073 DCAF12L1Q5VU92 463 aa13.97□□□□□ -0.17
TRAF4-214ENST00000580073 ARHGAP17Q68EM7 881 aa13.97□□□□□ -0.17
TRAF4-214ENST00000580073 SCD5Q86SK9 330 aa13.97□□□□□ -0.17
TRAF4-214ENST00000580073 TMPRSS6Q8IU80 811 aa13.97□□□□□ -0.17
TRAF4-214ENST00000580073 DENND1CQ8IV53 801 aa13.97□□□□□ -0.17
TRAF4-214ENST00000580073 ZCCHC9Q8N567 271 aaKnown RBP13.97□□□□□ -0.17
TRAF4-214ENST00000580073 RNF139Q8WU17 664 aa13.97□□□□□ -0.17
TRAF4-214ENST00000580073 CEP63Q96MT8 703 aa13.97□□□□□ -0.17
TRAF4-214ENST00000580073 GPR174Q9BXC1 333 aa13.97□□□□□ -0.17
TRAF4-214ENST00000580073 IRX2Q9BZI1 471 aaPredicted RBP13.97□□□□□ -0.17
TRAF4-214ENST00000580073 MIR1-1HGQ9H1L0 117 aa13.97□□□□□ -0.17
TRAF4-214ENST00000580073 ITM2CQ9NQX7 267 aa13.97□□□□□ -0.17
TRAF4-214ENST00000580073 CISHQ9NSE2 258 aa13.97□□□□□ -0.17
TRAF4-214ENST00000580073 ELOVL2Q9NXB9 296 aa13.97□□□□□ -0.17
TRAF4-214ENST00000580073 AGO1Q9UL18 857 aaKnown RBP13.97□□□□□ -0.17
TRAF4-214ENST00000580073 HBS1LQ9Y450 684 aaKnown RBP13.97□□□□□ -0.17
TRAF4-214ENST00000580073 PLXNA2O75051 1894 aa13.96□□□□□ -0.17
TRAF4-214ENST00000580073 SLC12A8A0AV02 714 aa13.96□□□□□ -0.17
TRAF4-214ENST00000580073 BICDL2A1A5D9 508 aa13.96□□□□□ -0.17
TRAF4-214ENST00000580073 SYCE3A1L190 88 aa13.96□□□□□ -0.17
TRAF4-214ENST00000580073 TYW5A2RUC4 315 aaKnown RBP13.96□□□□□ -0.17
TRAF4-214ENST00000580073 SLC16A3O15427 465 aaKnown RBP13.96□□□□□ -0.17
TRAF4-214ENST00000580073 SH3BP5O60239 455 aa13.96□□□□□ -0.17
TRAF4-214ENST00000580073 EPHX1P07099 455 aa13.96□□□□□ -0.17
TRAF4-214ENST00000580073 TPMTP51580 245 aa13.96□□□□□ -0.17
TRAF4-214ENST00000580073 BST2Q10589 180 aaKnown RBP13.96□□□□□ -0.17
TRAF4-214ENST00000580073 SFSWAPQ12872 951 aaKnown RBP13.96□□□□□ -0.17
TRAF4-214ENST00000580073 SUZ12Q15022 739 aaKnown RBP13.96□□□□□ -0.17
TRAF4-214ENST00000580073 GEN1Q17RS7 908 aa13.96□□□□□ -0.17
TRAF4-214ENST00000580073 PIGZQ86VD9 579 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms