RNA–Protein interactions for RNA: ENST00000578954.5

SS18-211, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 756 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-211ENST00000578954 TEAD2Q15562 447 aa16.74■□□□□ 0.27
SS18-211ENST00000578954 ARHGAP15Q53QZ3 475 aa16.74■□□□□ 0.27
SS18-211ENST00000578954 ACBD5Q5T8D3 534 aaPredicted RBP16.74■□□□□ 0.27
SS18-211ENST00000578954 SEL1L2Q5TEA6 688 aa16.74■□□□□ 0.27
SS18-211ENST00000578954 SPOCD1Q6ZMY3 1216 aa16.74■□□□□ 0.27
SS18-211ENST00000578954 ARL14EPQ8N8R7 260 aaPredicted RBP16.74■□□□□ 0.27
SS18-211ENST00000578954 ACTRT1Q8TDG2 376 aa16.74■□□□□ 0.27
SS18-211ENST00000578954 HSPH1Q92598 858 aa16.74■□□□□ 0.27
SS18-211ENST00000578954 AZIN2Q96A70 460 aa16.74■□□□□ 0.27
SS18-211ENST00000578954 ACSF2Q96CM8 615 aaPredicted RBP16.74■□□□□ 0.27
SS18-211ENST00000578954 FAF2Q96CS3 445 aa16.74■□□□□ 0.27
SS18-211ENST00000578954 PABPC5Q96DU9 382 aaKnown RBP16.74■□□□□ 0.27
SS18-211ENST00000578954 KCTD15Q96SI1 283 aaPredicted RBP16.74■□□□□ 0.27
SS18-211ENST00000578954 GAS2L1Q99501 681 aaPredicted RBP16.74■□□□□ 0.27
SS18-211ENST00000578954 ZNF670Q9BS34 389 aa16.74■□□□□ 0.27
SS18-211ENST00000578954 SLC46A2Q9BY10 475 aa16.74■□□□□ 0.27
SS18-211ENST00000578954 NACA2Q9H009 215 aa16.74■□□□□ 0.27
SS18-211ENST00000578954 S1PR5Q9H228 398 aa16.74■□□□□ 0.27
SS18-211ENST00000578954 GPATCH2LQ9NWQ4 482 aa16.74■□□□□ 0.27
SS18-211ENST00000578954 EFR3BQ9Y2G0 817 aa16.74■□□□□ 0.27
SS18-211ENST00000578954 hCG_1818297A0A087WSY0 165 aa16.73■□□□□ 0.27
SS18-211ENST00000578954 LRRD1A4D1F6 860 aa16.73■□□□□ 0.27
SS18-211ENST00000578954 ZNF185O15231 689 aa16.73■□□□□ 0.27
SS18-211ENST00000578954 STC2O76061 302 aa16.73■□□□□ 0.27
SS18-211ENST00000578954 APOEP02649 317 aa16.73■□□□□ 0.27
SS18-211ENST00000578954 MBL2P11226 248 aaPredicted RBP16.73■□□□□ 0.27
SS18-211ENST00000578954 TCF3P15923 654 aa16.73■□□□□ 0.27
SS18-211ENST00000578954 LTBRP36941 435 aa16.73■□□□□ 0.27
SS18-211ENST00000578954 CDKN2BP42772 138 aa16.73■□□□□ 0.27
SS18-211ENST00000578954 CDH6P55285 790 aa16.73■□□□□ 0.27
SS18-211ENST00000578954 ITIH3Q06033 890 aa16.73■□□□□ 0.27
SS18-211ENST00000578954 ZNF211Q13398 564 aaPredicted RBP16.73■□□□□ 0.27
SS18-211ENST00000578954 DPYSL3Q14195 570 aa16.73■□□□□ 0.27
SS18-211ENST00000578954 WHAMMP3Q1A5X7 153 aa16.73■□□□□ 0.27
SS18-211ENST00000578954 ARTNQ5T4W7 220 aa16.73■□□□□ 0.27
SS18-211ENST00000578954 STXBP5Q5T5C0 1151 aa16.73■□□□□ 0.27
SS18-211ENST00000578954 GPR158Q5T848 1215 aa16.73■□□□□ 0.27
SS18-211ENST00000578954 MFSD7Q6UXD7 560 aa16.73■□□□□ 0.27
SS18-211ENST00000578954 ANKS1BQ7Z6G8 1248 aa16.73■□□□□ 0.27
SS18-211ENST00000578954 MAP7D3Q8IWC1 876 aa16.73■□□□□ 0.27
SS18-211ENST00000578954 UNC45BQ8IWX7 931 aa16.73■□□□□ 0.27
SS18-211ENST00000578954 MAB21L3Q8N8X9 362 aa16.73■□□□□ 0.27
SS18-211ENST00000578954 ATP6V0D2Q8N8Y2 350 aa16.73■□□□□ 0.27
SS18-211ENST00000578954 ADAMTS19Q8TE59 1207 aa16.73■□□□□ 0.27
SS18-211ENST00000578954 RNF34Q969K3 372 aa16.73■□□□□ 0.27
SS18-211ENST00000578954 MSLNLQ96KJ4 702 aa16.73■□□□□ 0.27
SS18-211ENST00000578954 BTN2A3PQ96KV6 586 aa16.73■□□□□ 0.27
SS18-211ENST00000578954 C1orf74Q96LT6 269 aa16.73■□□□□ 0.27
SS18-211ENST00000578954 ADAM7Q9H2U9 754 aa16.73■□□□□ 0.27
SS18-211ENST00000578954 DHX35Q9H5Z1 703 aaKnown RBP16.73■□□□□ 0.27
SS18-211ENST00000578954 TRPC7Q9HCX4 862 aa16.73■□□□□ 0.27
SS18-211ENST00000578954 TMPRSS4Q9NRS4 437 aa16.73■□□□□ 0.27
SS18-211ENST00000578954 KLHL11Q9NVR0 708 aa16.73■□□□□ 0.27
SS18-211ENST00000578954 ARHGAP26Q9UNA1 814 aa16.73■□□□□ 0.27
SS18-211ENST00000578954 MRPS23Q9Y3D9 190 aaKnown RBP16.73■□□□□ 0.27
SS18-211ENST00000578954 CEP104O60308 925 aa16.72■□□□□ 0.27
SS18-211ENST00000578954 PAGE1O75459 146 aa16.72■□□□□ 0.27
SS18-211ENST00000578954 LATS1O95835 1130 aa16.72■□□□□ 0.27
SS18-211ENST00000578954 CD48P09326 243 aa16.72■□□□□ 0.27
SS18-211ENST00000578954 CEBPBP17676 345 aa16.72■□□□□ 0.27
SS18-211ENST00000578954 IL4RP24394 825 aa16.72■□□□□ 0.27
SS18-211ENST00000578954 HTR7P34969 479 aa16.72■□□□□ 0.27
SS18-211ENST00000578954 CETN2P41208 172 aa16.72■□□□□ 0.27
SS18-211ENST00000578954 CLUL1Q15846 466 aa16.72■□□□□ 0.27
SS18-211ENST00000578954 TFDP3Q5H9I0 405 aa16.72■□□□□ 0.27
SS18-211ENST00000578954 MANEALQ5VSG8 457 aa16.72■□□□□ 0.27
SS18-211ENST00000578954 AADACL2Q6P093 401 aa16.72■□□□□ 0.27
SS18-211ENST00000578954 ZNF572Q7Z3I7 529 aaPredicted RBP16.72■□□□□ 0.27
SS18-211ENST00000578954 SLC13A5Q86YT5 568 aaPredicted RBP16.72■□□□□ 0.27
SS18-211ENST00000578954 CMTM8Q8IZV2 173 aa16.72■□□□□ 0.27
SS18-211ENST00000578954 KCTD6Q8NC69 237 aa16.72■□□□□ 0.27
SS18-211ENST00000578954 RNF25Q96BH1 459 aaPredicted RBP16.72■□□□□ 0.27
SS18-211ENST00000578954 CYP2S1Q96SQ9 504 aa16.72■□□□□ 0.27
SS18-211ENST00000578954 MAGEB5Q9BZ81 275 aa16.72■□□□□ 0.27
SS18-211ENST00000578954 OSBPL8Q9BZF1 889 aa16.72■□□□□ 0.27
SS18-211ENST00000578954 STOML2Q9UJZ1 356 aa16.72■□□□□ 0.27
SS18-211ENST00000578954 CPQQ9Y646 472 aa16.72■□□□□ 0.27
SS18-211ENST00000578954 HELZP42694 1942 aaKnown RBP16.72■□□□□ 0.27
SS18-211ENST00000578954 PI4K2BG5E9Z4 385 aa16.71■□□□□ 0.27
SS18-211ENST00000578954 PGRMC1O00264 195 aaKnown RBP16.71■□□□□ 0.27
SS18-211ENST00000578954 GREM1O60565 184 aa16.71■□□□□ 0.27
SS18-211ENST00000578954 CKMP06732 381 aa16.71■□□□□ 0.27
SS18-211ENST00000578954 IGFBP4P22692 258 aa16.71■□□□□ 0.27
SS18-211ENST00000578954 HOXC13P31276 330 aa16.71■□□□□ 0.27
SS18-211ENST00000578954 HCAR3P49019 387 aa16.71■□□□□ 0.27
SS18-211ENST00000578954 KCNQ1P51787 676 aa16.71■□□□□ 0.27
SS18-211ENST00000578954 MLLT6P55198 1093 aaPredicted RBP16.71■□□□□ 0.27
SS18-211ENST00000578954 ZXDBP98169 803 aa16.71■□□□□ 0.27
SS18-211ENST00000578954 DLX2Q07687 328 aaPredicted RBP16.71■□□□□ 0.27
SS18-211ENST00000578954 KLF1Q13351 362 aaPredicted RBP16.71■□□□□ 0.27
SS18-211ENST00000578954 KRT81Q14533 505 aa16.71■□□□□ 0.27
SS18-211ENST00000578954 ODF2Q5BJF6 829 aa16.71■□□□□ 0.27
SS18-211ENST00000578954 ZFYVE27Q5T4F4 411 aa16.71■□□□□ 0.27
SS18-211ENST00000578954 PIK3R6Q5UE93 754 aa16.71■□□□□ 0.27
SS18-211ENST00000578954 POTEHQ6S545 545 aa16.71■□□□□ 0.27
SS18-211ENST00000578954 Q6ZNB5 142 aa16.71■□□□□ 0.27
SS18-211ENST00000578954 ZNF683Q8IZ20 524 aa16.71■□□□□ 0.27
SS18-211ENST00000578954 PYROXD2Q8N2H3 581 aa16.71■□□□□ 0.27
SS18-211ENST00000578954 ITFG1Q8TB96 612 aa16.71■□□□□ 0.27
SS18-211ENST00000578954 PRMT1Q99873 361 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms