RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 PKN3Q6P5Z2 889 aa22.56■■□□□ 1.2
CDC42EP4-203ENST00000578516 KIAA1958Q8N8K9 716 aa22.56■■□□□ 1.2
CDC42EP4-203ENST00000578516 RXFP2Q8WXD0 754 aa22.56■■□□□ 1.2
CDC42EP4-203ENST00000578516 PRICKLE1Q96MT3 831 aaPredicted RBP22.56■■□□□ 1.2
CDC42EP4-203ENST00000578516 MCEEQ96PE7 176 aa22.56■■□□□ 1.2
CDC42EP4-203ENST00000578516 TRIM62Q9BVG3 475 aa22.56■■□□□ 1.2
CDC42EP4-203ENST00000578516 TRIM7Q9C029 511 aa22.56■■□□□ 1.2
CDC42EP4-203ENST00000578516 ZDHHC4Q9NPG8 344 aa22.56■■□□□ 1.2
CDC42EP4-203ENST00000578516 POLR3BQ9NW08 1133 aaPredicted RBP22.56■■□□□ 1.2
CDC42EP4-203ENST00000578516 CACNA1IQ9P0X4 2223 aa22.55■■□□□ 1.2
CDC42EP4-203ENST00000578516 ACSL4O60488 711 aa22.55■■□□□ 1.2
CDC42EP4-203ENST00000578516 FTLP02792 175 aaPredicted RBP22.55■■□□□ 1.2
CDC42EP4-203ENST00000578516 CHRNB1P11230 501 aa22.55■■□□□ 1.2
CDC42EP4-203ENST00000578516 TYRP14679 529 aa22.55■■□□□ 1.2
CDC42EP4-203ENST00000578516 HNRNPH3P31942 346 aaKnown RBP22.55■■□□□ 1.2
CDC42EP4-203ENST00000578516 RFC1P35251 1148 aaPredicted RBP22.55■■□□□ 1.2
CDC42EP4-203ENST00000578516 GSCP56915 257 aaPredicted RBP22.55■■□□□ 1.2
CDC42EP4-203ENST00000578516 RPL7AP62424 266 aaKnown RBP22.55■■□□□ 1.2
CDC42EP4-203ENST00000578516 OGDHQ02218 1023 aa22.55■■□□□ 1.2
CDC42EP4-203ENST00000578516 RING1Q06587 406 aa22.55■■□□□ 1.2
CDC42EP4-203ENST00000578516 NR1H3Q13133 447 aa22.55■■□□□ 1.2
CDC42EP4-203ENST00000578516 GAS6Q14393 721 aa22.55■■□□□ 1.2
CDC42EP4-203ENST00000578516 TMEM196Q5HYL7 178 aa22.55■■□□□ 1.2
CDC42EP4-203ENST00000578516 FYB2Q5VWT5 728 aa22.55■■□□□ 1.2
CDC42EP4-203ENST00000578516 ETFBKMTQ8IXQ9 262 aa22.55■■□□□ 1.2
CDC42EP4-203ENST00000578516 FAM217AQ8IXS0 508 aa22.55■■□□□ 1.2
CDC42EP4-203ENST00000578516 C3orf20Q8ND61 904 aa22.55■■□□□ 1.2
CDC42EP4-203ENST00000578516 OR8K1Q8NGG5 319 aa22.55■■□□□ 1.2
CDC42EP4-203ENST00000578516 CD101Q93033 1021 aa22.55■■□□□ 1.2
CDC42EP4-203ENST00000578516 P2RY13Q9BPV8 354 aa22.55■■□□□ 1.2
CDC42EP4-203ENST00000578516 SELENOOQ9BVL4 669 aa22.55■■□□□ 1.2
CDC42EP4-203ENST00000578516 LMAN1LQ9HAT1 526 aa22.55■■□□□ 1.2
CDC42EP4-203ENST00000578516 C2orf42Q9NWW7 574 aa22.55■■□□□ 1.2
CDC42EP4-203ENST00000578516 C2CD4BA6NLJ0 364 aa22.54■■□□□ 1.2
CDC42EP4-203ENST00000578516 GFRA2O00451 464 aa22.54■■□□□ 1.2
CDC42EP4-203ENST00000578516 TULP3O75386 442 aa22.54■■□□□ 1.2
CDC42EP4-203ENST00000578516 ABCB4P21439 1286 aa22.54■■□□□ 1.2
CDC42EP4-203ENST00000578516 CLCN5P51795 746 aa22.54■■□□□ 1.2
CDC42EP4-203ENST00000578516 GAD2Q05329 585 aa22.54■■□□□ 1.2
CDC42EP4-203ENST00000578516 GFPT1Q06210 699 aaPredicted RBP22.54■■□□□ 1.2
CDC42EP4-203ENST00000578516 NNTQ13423 1086 aa22.54■■□□□ 1.2
CDC42EP4-203ENST00000578516 ARID5BQ14865 1188 aa22.54■■□□□ 1.2
CDC42EP4-203ENST00000578516 CCDC14Q49A88 953 aa22.54■■□□□ 1.2
CDC42EP4-203ENST00000578516 RAP1GAP2Q684P5 730 aa22.54■■□□□ 1.2
CDC42EP4-203ENST00000578516 NUGGCQ68CJ6 796 aa22.54■■□□□ 1.2
CDC42EP4-203ENST00000578516 PHTF2Q8N3S3 785 aa22.54■■□□□ 1.2
CDC42EP4-203ENST00000578516 TC2NQ8N9U0 490 aa22.54■■□□□ 1.2
CDC42EP4-203ENST00000578516 ZNF653Q96CK0 615 aa22.54■■□□□ 1.2
CDC42EP4-203ENST00000578516 MRFAP1L1Q96HT8 127 aa22.54■■□□□ 1.2
CDC42EP4-203ENST00000578516 NENFQ9UMX5 172 aa22.54■■□□□ 1.2
CDC42EP4-203ENST00000578516 AKR1B15C9JRZ8 316 aaPredicted RBP22.53■■□□□ 1.2
CDC42EP4-203ENST00000578516 ADCY5O95622 1261 aa22.53■■□□□ 1.2
CDC42EP4-203ENST00000578516 APOEP02649 317 aa22.53■■□□□ 1.2
CDC42EP4-203ENST00000578516 IRAK1P51617 712 aa22.53■■□□□ 1.2
CDC42EP4-203ENST00000578516 MLLT6P55198 1093 aaPredicted RBP22.53■■□□□ 1.2
CDC42EP4-203ENST00000578516 SEC13P55735 322 aa22.53■■□□□ 1.2
CDC42EP4-203ENST00000578516 DEUP1Q05D60 604 aa22.53■■□□□ 1.2
CDC42EP4-203ENST00000578516 CCINQ13939 588 aa22.53■■□□□ 1.2
CDC42EP4-203ENST00000578516 PPP1R15BQ5SWA1 713 aa22.53■■□□□ 1.2
CDC42EP4-203ENST00000578516 PIK3R6Q5UE93 754 aa22.53■■□□□ 1.2
CDC42EP4-203ENST00000578516 CIR1Q86X95 450 aaPredicted RBP22.53■■□□□ 1.2
CDC42EP4-203ENST00000578516 CPXM2Q8N436 756 aa22.53■■□□□ 1.2
CDC42EP4-203ENST00000578516 WFDC5Q8TCV5 224 aa22.53■■□□□ 1.2
CDC42EP4-203ENST00000578516 RNF34Q969K3 372 aa22.53■■□□□ 1.2
CDC42EP4-203ENST00000578516 NT5C3BQ969T7 300 aa22.53■■□□□ 1.2
CDC42EP4-203ENST00000578516 MSANTD3Q96H12 275 aa22.53■■□□□ 1.2
CDC42EP4-203ENST00000578516 DNAJC17Q9NVM6 304 aaKnown RBP22.53■■□□□ 1.2
CDC42EP4-203ENST00000578516 MARK1Q9P0L2 795 aa22.53■■□□□ 1.2
CDC42EP4-203ENST00000578516 WDR35Q9P2L0 1181 aa22.53■■□□□ 1.2
CDC42EP4-203ENST00000578516 MYO1AQ9UBC5 1043 aa22.53■■□□□ 1.2
CDC42EP4-203ENST00000578516 STAP1Q9ULZ2 295 aa22.53■■□□□ 1.2
CDC42EP4-203ENST00000578516 ZNF510Q9Y2H8 683 aa22.53■■□□□ 1.2
CDC42EP4-203ENST00000578516 MRPS17Q9Y2R5 130 aaKnown RBP22.53■■□□□ 1.2
CDC42EP4-203ENST00000578516 RTN2O75298 545 aa22.52■■□□□ 1.2
CDC42EP4-203ENST00000578516 PENKP01210 267 aaPredicted RBP22.52■■□□□ 1.2
CDC42EP4-203ENST00000578516 KRT3P12035 628 aa22.52■■□□□ 1.2
CDC42EP4-203ENST00000578516 PDGFRAP16234 1089 aa22.52■■□□□ 1.2
CDC42EP4-203ENST00000578516 RPS24P62847 133 aaKnown RBP22.52■■□□□ 1.2
CDC42EP4-203ENST00000578516 SLC25A52Q3SY17 297 aa22.52■■□□□ 1.2
CDC42EP4-203ENST00000578516 ADGRF1Q5T601 910 aa22.52■■□□□ 1.2
CDC42EP4-203ENST00000578516 CHSY1Q86X52 802 aa22.52■■□□□ 1.2
CDC42EP4-203ENST00000578516 FAM131BQ86XD5 332 aa22.52■■□□□ 1.2
CDC42EP4-203ENST00000578516 UNC45BQ8IWX7 931 aa22.52■■□□□ 1.2
CDC42EP4-203ENST00000578516 CFAP52Q8N1V2 620 aa22.52■■□□□ 1.2
CDC42EP4-203ENST00000578516 ARHGEF26Q96DR7 871 aa22.52■■□□□ 1.2
CDC42EP4-203ENST00000578516 PACSIN1Q9BY11 444 aa22.52■■□□□ 1.2
CDC42EP4-203ENST00000578516 SPTLC3Q9NUV7 552 aa22.52■■□□□ 1.2
CDC42EP4-203ENST00000578516 CNOT8Q9UFF9 292 aaKnown RBP22.52■■□□□ 1.2
CDC42EP4-203ENST00000578516 STOML2Q9UJZ1 356 aa22.52■■□□□ 1.2
CDC42EP4-203ENST00000578516 DOCK4Q8N1I0 1966 aa22.52■■□□□ 1.2
CDC42EP4-203ENST00000578516 KCNU1A8MYU2 1149 aa22.51■■□□□ 1.19
CDC42EP4-203ENST00000578516 CCP110O43303 1012 aa22.51■■□□□ 1.19
CDC42EP4-203ENST00000578516 CACNG3O60359 315 aa22.51■■□□□ 1.19
CDC42EP4-203ENST00000578516 TPM1P09493 284 aa22.51■■□□□ 1.19
CDC42EP4-203ENST00000578516 GPD1P21695 349 aa22.51■■□□□ 1.19
CDC42EP4-203ENST00000578516 HOXD9P28356 352 aaPredicted RBP22.51■■□□□ 1.19
CDC42EP4-203ENST00000578516 SLC11A2P49281 568 aa22.51■■□□□ 1.19
CDC42EP4-203ENST00000578516 NUMBP49757 651 aa22.51■■□□□ 1.19
CDC42EP4-203ENST00000578516 ZNF252P-AS1Q0IIN9 211 aa22.51■■□□□ 1.19
CDC42EP4-203ENST00000578516 BNIPLQ7Z465 357 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms