RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 RPLP0P6Q8NHW5 317 aa20.09■□□□□ 0.81
SS18-208ENST00000577751 SLC30A5Q8TAD4 765 aa20.09■□□□□ 0.81
SS18-208ENST00000577751 OLIG1Q8TAK6 271 aa20.09■□□□□ 0.81
SS18-208ENST00000577751 BHMTQ93088 406 aa20.09■□□□□ 0.81
SS18-208ENST00000577751 NT5C3BQ969T7 300 aa20.09■□□□□ 0.81
SS18-208ENST00000577751 FAM86C1Q9NVL1 165 aa20.09■□□□□ 0.81
SS18-208ENST00000577751 TMEM59LQ9UK28 342 aa20.09■□□□□ 0.81
SS18-208ENST00000577751 STARD13Q9Y3M8 1113 aa20.09■□□□□ 0.81
SS18-208ENST00000577751 A0A1W2PQJ5 194 aa20.08■□□□□ 0.81
SS18-208ENST00000577751 FAM170AA1A519 330 aa20.08■□□□□ 0.81
SS18-208ENST00000577751 K7ESF4 209 aa20.08■□□□□ 0.81
SS18-208ENST00000577751 PRKCIP41743 596 aa20.08■□□□□ 0.81
SS18-208ENST00000577751 MRPS21P82921 87 aaKnown RBP20.08■□□□□ 0.81
SS18-208ENST00000577751 PPP2R5DQ14738 602 aa20.08■□□□□ 0.81
SS18-208ENST00000577751 MPPE1Q53F39 396 aa20.08■□□□□ 0.81
SS18-208ENST00000577751 ZC3H12AQ5D1E8 599 aaKnown RBP20.08■□□□□ 0.81
SS18-208ENST00000577751 FAM102AQ5T9C2 384 aaPredicted RBP20.08■□□□□ 0.81
SS18-208ENST00000577751 NADSYN1Q6IA69 706 aa20.08■□□□□ 0.81
SS18-208ENST00000577751 GRAMD4Q6IC98 578 aa20.08■□□□□ 0.81
SS18-208ENST00000577751 PHF13Q86YI8 300 aaPredicted RBP20.08■□□□□ 0.81
SS18-208ENST00000577751 NPY6RQ99463 290 aa20.08■□□□□ 0.81
SS18-208ENST00000577751 FAM126AQ9BYI3 521 aaPredicted RBP20.08■□□□□ 0.81
SS18-208ENST00000577751 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.08■□□□□ 0.81
SS18-208ENST00000577751 RRN3Q9NYV6 651 aa20.08■□□□□ 0.81
SS18-208ENST00000577751 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.08■□□□□ 0.81
SS18-208ENST00000577751 SLC27A6Q9Y2P4 619 aa20.08■□□□□ 0.81
SS18-208ENST00000577751 GOLGA6L7A0A1B0GV03 622 aa20.07■□□□□ 0.8
SS18-208ENST00000577751 TBC1D3BA6NDS4 549 aa20.07■□□□□ 0.8
SS18-208ENST00000577751 KCNU1A8MYU2 1149 aa20.07■□□□□ 0.8
SS18-208ENST00000577751 PROB1E7EW31 1015 aa20.07■□□□□ 0.8
SS18-208ENST00000577751 HOXD9P28356 352 aaPredicted RBP20.07■□□□□ 0.8
SS18-208ENST00000577751 HOXA6P31267 233 aa20.07■□□□□ 0.8
SS18-208ENST00000577751 SLC6A4P31645 630 aa20.07■□□□□ 0.8
SS18-208ENST00000577751 GBP1P32455 592 aa20.07■□□□□ 0.8
SS18-208ENST00000577751 DGKGP49619 791 aa20.07■□□□□ 0.8
SS18-208ENST00000577751 GSCP56915 257 aaPredicted RBP20.07■□□□□ 0.8
SS18-208ENST00000577751 MPP7Q5T2T1 576 aa20.07■□□□□ 0.8
SS18-208ENST00000577751 PIK3R6Q5UE93 754 aa20.07■□□□□ 0.8
SS18-208ENST00000577751 SFMBT2Q5VUG0 894 aa20.07■□□□□ 0.8
SS18-208ENST00000577751 OTUD1Q5VV17 481 aaPredicted RBP20.07■□□□□ 0.8
SS18-208ENST00000577751 E4F1Q66K89 784 aaPredicted RBP20.07■□□□□ 0.8
SS18-208ENST00000577751 RNF43Q68DV7 783 aa20.07■□□□□ 0.8
SS18-208ENST00000577751 MMS22LQ6ZRQ5 1243 aa20.07■□□□□ 0.8
SS18-208ENST00000577751 NUDT18Q6ZVK8 323 aa20.07■□□□□ 0.8
SS18-208ENST00000577751 SYT13Q7L8C5 426 aa20.07■□□□□ 0.8
SS18-208ENST00000577751 ZBTB44Q8NCP5 570 aa20.07■□□□□ 0.8
SS18-208ENST00000577751 KCNV2Q8TDN2 545 aa20.07■□□□□ 0.8
SS18-208ENST00000577751 DDI1Q8WTU0 396 aa20.07■□□□□ 0.8
SS18-208ENST00000577751 FAM122AQ96E09 287 aa20.07■□□□□ 0.8
SS18-208ENST00000577751 TMA16Q96EY4 203 aaKnown RBP20.07■□□□□ 0.8
SS18-208ENST00000577751 PGAP3Q96FM1 320 aaPredicted RBP20.07■□□□□ 0.8
SS18-208ENST00000577751 BTN2A3PQ96KV6 586 aa20.07■□□□□ 0.8
SS18-208ENST00000577751 PHOX2BQ99453 314 aa20.07■□□□□ 0.8
SS18-208ENST00000577751 SLC2A11Q9BYW1 496 aa20.07■□□□□ 0.8
SS18-208ENST00000577751 ADAM33Q9BZ11 813 aa20.07■□□□□ 0.8
SS18-208ENST00000577751 XPO4Q9C0E2 1151 aaKnown RBP20.07■□□□□ 0.8
SS18-208ENST00000577751 FAM204AQ9H8W3 233 aa20.07■□□□□ 0.8
SS18-208ENST00000577751 DDIT4Q9NX09 232 aa20.07■□□□□ 0.8
SS18-208ENST00000577751 CALCOCO1Q9P1Z2 691 aa20.07■□□□□ 0.8
SS18-208ENST00000577751 TSPAN3O60637 253 aa20.06■□□□□ 0.8
SS18-208ENST00000577751 SLC2A3P11169 496 aa20.06■□□□□ 0.8
SS18-208ENST00000577751 FLT3P36888 993 aa20.06■□□□□ 0.8
SS18-208ENST00000577751 NSFP46459 744 aaKnown RBP20.06■□□□□ 0.8
SS18-208ENST00000577751 SEC13P55735 322 aa20.06■□□□□ 0.8
SS18-208ENST00000577751 RNASE9P60153 205 aaKnown RBP20.06■□□□□ 0.8
SS18-208ENST00000577751 ASIC2Q16515 512 aa20.06■□□□□ 0.8
SS18-208ENST00000577751 HSF5Q4G112 596 aaPredicted RBP20.06■□□□□ 0.8
SS18-208ENST00000577751 C2orf27AQ580R0 203 aa20.06■□□□□ 0.8
SS18-208ENST00000577751 EMC10Q5UCC4 262 aa20.06■□□□□ 0.8
SS18-208ENST00000577751 TRNP1Q6NT89 227 aa20.06■□□□□ 0.8
SS18-208ENST00000577751 BNIPLQ7Z465 357 aa20.06■□□□□ 0.8
SS18-208ENST00000577751 ACDQ96AP0 544 aa20.06■□□□□ 0.8
SS18-208ENST00000577751 IQCDQ96DY2 449 aa20.06■□□□□ 0.8
SS18-208ENST00000577751 DDX50Q9BQ39 737 aaKnown RBP20.06■□□□□ 0.8
SS18-208ENST00000577751 C11orf70Q9BRQ4 267 aa20.06■□□□□ 0.8
SS18-208ENST00000577751 HAUS4Q9H6D7 363 aa20.06■□□□□ 0.8
SS18-208ENST00000577751 ZSCAN32Q9NX65 697 aa20.06■□□□□ 0.8
SS18-208ENST00000577751 XPO7Q9UIA9 1087 aaKnown RBP20.06■□□□□ 0.8
SS18-208ENST00000577751 HCN2Q9UL51 889 aa20.06■□□□□ 0.8
SS18-208ENST00000577751 CLEC4EQ9ULY5 219 aa20.06■□□□□ 0.8
SS18-208ENST00000577751 STAP1Q9ULZ2 295 aa20.06■□□□□ 0.8
SS18-208ENST00000577751 MYO18AQ92614 2054 aaKnown RBP20.06■□□□□ 0.8
SS18-208ENST00000577751 ITIH6Q6UXX5 1313 aa20.05■□□□□ 0.8
SS18-208ENST00000577751 PRRT4C9JH25 899 aa20.05■□□□□ 0.8
SS18-208ENST00000577751 GOLGA8SH3BPF8 625 aa20.05■□□□□ 0.8
SS18-208ENST00000577751 M0QYT0 321 aa20.05■□□□□ 0.8
SS18-208ENST00000577751 APOEP02649 317 aa20.05■□□□□ 0.8
SS18-208ENST00000577751 TFE3P19532 575 aaPredicted RBP20.05■□□□□ 0.8
SS18-208ENST00000577751 CCR1P32246 355 aa20.05■□□□□ 0.8
SS18-208ENST00000577751 SGSHP51688 502 aa20.05■□□□□ 0.8
SS18-208ENST00000577751 NRLP54845 237 aa20.05■□□□□ 0.8
SS18-208ENST00000577751 SLC25A52Q3SY17 297 aa20.05■□□□□ 0.8
SS18-208ENST00000577751 C10orf76Q5T2E6 689 aa20.05■□□□□ 0.8
SS18-208ENST00000577751 ACAD10Q6JQN1 1059 aa20.05■□□□□ 0.8
SS18-208ENST00000577751 RFWD3Q6PCD5 774 aa20.05■□□□□ 0.8
SS18-208ENST00000577751 MON1BQ7L1V2 547 aa20.05■□□□□ 0.8
SS18-208ENST00000577751 ATP6V0D2Q8N8Y2 350 aa20.05■□□□□ 0.8
SS18-208ENST00000577751 IL17RCQ8NAC3 791 aa20.05■□□□□ 0.8
SS18-208ENST00000577751 RNF214Q8ND24 703 aa20.05■□□□□ 0.8
SS18-208ENST00000577751 NUCKS1Q9H1E3 243 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms