RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 MRFAP1L1Q96HT8 127 aa13.21□□□□□ -0.29
CDK5RAP3-203ENST00000577442 PNKPQ96T60 521 aa13.21□□□□□ -0.29
CDK5RAP3-203ENST00000577442 DNAJC7Q99615 494 aa13.21□□□□□ -0.29
CDK5RAP3-203ENST00000577442 SELENOOQ9BVL4 669 aa13.21□□□□□ -0.29
CDK5RAP3-203ENST00000577442 KCNH6Q9H252 994 aa13.21□□□□□ -0.29
CDK5RAP3-203ENST00000577442 CHRDQ9H2X0 955 aa13.21□□□□□ -0.29
CDK5RAP3-203ENST00000577442 DEC1Q9P2X7 70 aa13.21□□□□□ -0.29
CDK5RAP3-203ENST00000577442 TMEM59LQ9UK28 342 aa13.21□□□□□ -0.29
CDK5RAP3-203ENST00000577442 SYNJ2BP-COX16A0A087WUM0 186 aa13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 FAM170AA1A519 330 aa13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 M0QYT0 321 aa13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 DDX3XO00571 662 aaKnown RBP eCLIP13.2□□□□□ -0.31e-8■■■□□ 15.4
CDK5RAP3-203ENST00000577442 PI15O43692 258 aa13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 MFAP3LO75121 409 aa13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 RTN2O75298 545 aa13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 MOCS2O96007 188 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 PENKP01210 267 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 APODP05090 189 aa13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 MYBL1P10243 752 aa13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 CHRNB1P11230 501 aa13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 KRT3P12035 628 aa13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 TYRP14679 529 aa13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 ABCB4P21439 1286 aa13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 FLT3P36888 993 aa13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 GALK1P51570 392 aa13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 ZNF75DP51815 510 aa13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 PITX1P78337 314 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 CCINQ13939 588 aa13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 ARID5BQ14865 1188 aa13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 MPPE1Q53F39 396 aa13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 ZC3H12AQ5D1E8 599 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 GRAMD4Q6IC98 578 aa13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 FSTL4Q6MZW2 842 aa13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 ETFBKMTQ8IXQ9 262 aa13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 ZNF687Q8N1G0 1237 aa13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 ZNF557Q8N988 423 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 DTWD2Q8NBA8 298 aa13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 HJURPQ8NCD3 748 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 OLIG1Q8TAK6 271 aa13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 NT5C3BQ969T7 300 aa13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 CHFRQ96EP1 664 aa13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 PGAP3Q96FM1 320 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 BTN2A3PQ96KV6 586 aa13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 NPY6RQ99463 290 aa13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.2□□□□□ -0.31e-6■□□□□ 8
CDK5RAP3-203ENST00000577442 LMAN1LQ9HAT1 526 aa13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 ARHGEF4Q9NR80 690 aa13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 COX16Q9P0S2 106 aa13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 DLGAP2Q9P1A6 1054 aa13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 MTF2Q9Y483 593 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP3-203ENST00000577442 SIGLEC16A6NMB1 481 aa13.19□□□□□ -0.3
CDK5RAP3-203ENST00000577442 TMCO5BA8MYB1 307 aa13.19□□□□□ -0.3
CDK5RAP3-203ENST00000577442 GALR2O43603 387 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-203ENST00000577442 TULP3O75386 442 aa13.19□□□□□ -0.3
CDK5RAP3-203ENST00000577442 KAT7O95251 611 aa13.19□□□□□ -0.3
CDK5RAP3-203ENST00000577442 PDGFRAP16234 1089 aa13.19□□□□□ -0.3
CDK5RAP3-203ENST00000577442 RDXP35241 583 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-203ENST00000577442 GRIA2P42262 883 aa13.19□□□□□ -0.3
CDK5RAP3-203ENST00000577442 PTPN9P43378 593 aa13.19□□□□□ -0.3
CDK5RAP3-203ENST00000577442 DEUP1Q05D60 604 aa13.19□□□□□ -0.3
CDK5RAP3-203ENST00000577442 KDSRQ06136 332 aa13.19□□□□□ -0.3
CDK5RAP3-203ENST00000577442 NME3Q13232 169 aa13.19□□□□□ -0.3
CDK5RAP3-203ENST00000577442 EIF4EBP2Q13542 120 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-203ENST00000577442 BRMS1LQ5PSV4 323 aa13.19□□□□□ -0.3
CDK5RAP3-203ENST00000577442 ACBD5Q5T8D3 534 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-203ENST00000577442 DCUN1D2Q6PH85 259 aa13.19□□□□□ -0.3
CDK5RAP3-203ENST00000577442 CHSY1Q86X52 802 aa13.19□□□□□ -0.3
CDK5RAP3-203ENST00000577442 DDI1Q8WTU0 396 aa13.19□□□□□ -0.3
CDK5RAP3-203ENST00000577442 ZNF653Q96CK0 615 aa13.19□□□□□ -0.3
CDK5RAP3-203ENST00000577442 TBCBQ99426 244 aa13.19□□□□□ -0.3
CDK5RAP3-203ENST00000577442 SLC2A11Q9BYW1 496 aa13.19□□□□□ -0.3
CDK5RAP3-203ENST00000577442 DEF6Q9H4E7 631 aa13.19□□□□□ -0.3
CDK5RAP3-203ENST00000577442 ABHD10Q9NUJ1 306 aa13.19□□□□□ -0.3
CDK5RAP3-203ENST00000577442 DNAJC17Q9NVM6 304 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-203ENST00000577442 TAS2R14Q9NYV8 317 aa13.19□□□□□ -0.3
CDK5RAP3-203ENST00000577442 ADAMTS1Q9UHI8 967 aa13.19□□□□□ -0.3
CDK5RAP3-203ENST00000577442 SCINQ9Y6U3 715 aa13.19□□□□□ -0.3
CDK5RAP3-203ENST00000577442 PIEZO1Q92508 2521 aa13.19□□□□□ -0.3
CDK5RAP3-203ENST00000577442 SSU72P8A0A1W2PR75 194 aa13.18□□□□□ -0.3
CDK5RAP3-203ENST00000577442 C2CD4BA6NLJ0 364 aa13.18□□□□□ -0.3
CDK5RAP3-203ENST00000577442 KCNU1A8MYU2 1149 aa13.18□□□□□ -0.3
CDK5RAP3-203ENST00000577442 AKR1B15C9JRZ8 316 aaPredicted RBP13.18□□□□□ -0.3
CDK5RAP3-203ENST00000577442 F5H5T6 163 aa13.18□□□□□ -0.3
CDK5RAP3-203ENST00000577442 AP5Z1O43299 807 aa13.18□□□□□ -0.3
CDK5RAP3-203ENST00000577442 ATG13O75143 517 aa13.18□□□□□ -0.3
CDK5RAP3-203ENST00000577442 EGFP01133 1207 aa13.18□□□□□ -0.3
CDK5RAP3-203ENST00000577442 FTLP02792 175 aaPredicted RBP13.18□□□□□ -0.3
CDK5RAP3-203ENST00000577442 GPD1P21695 349 aa13.18□□□□□ -0.3
CDK5RAP3-203ENST00000577442 RRM1P23921 792 aa13.18□□□□□ -0.3
CDK5RAP3-203ENST00000577442 DGKGP49619 791 aa13.18□□□□□ -0.3
CDK5RAP3-203ENST00000577442 CXCR3P49682 368 aa13.18□□□□□ -0.3
CDK5RAP3-203ENST00000577442 FAM133BQ5BKY9 247 aaKnown RBP13.18□□□□□ -0.3
CDK5RAP3-203ENST00000577442 MPP7Q5T2T1 576 aa13.18□□□□□ -0.3
CDK5RAP3-203ENST00000577442 OTUD1Q5VV17 481 aaPredicted RBP13.18□□□□□ -0.3
CDK5RAP3-203ENST00000577442 FYB2Q5VWT5 728 aa13.18□□□□□ -0.3
CDK5RAP3-203ENST00000577442 STRADAQ7RTN6 431 aa13.18□□□□□ -0.3
CDK5RAP3-203ENST00000577442 PHLDB2Q86SQ0 1253 aa13.18□□□□□ -0.3
CDK5RAP3-203ENST00000577442 C12orf40Q86WS4 652 aa13.18□□□□□ -0.3
CDK5RAP3-203ENST00000577442 CCDC117Q8IWD4 279 aaPredicted RBP13.18□□□□□ -0.3
CDK5RAP3-203ENST00000577442 EMC1Q8N766 993 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms