RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 FBXO47Q5MNV8 452 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 CC2D1BQ5T0F9 858 aaKnown RBP2.87□□□□□ -1.95
COPS3-213ENST00000577210 NAA35Q5VZE5 725 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 TBC1D3GQ6DHY5 549 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 TBC1D3CQ6IPX1 549 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 MSANTD2Q6P1R3 559 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 NAPRTQ6XQN6 538 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 DCDC5Q6ZRR9 648 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 PIK3AP1Q6ZUJ8 805 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 BCDIN3DQ7Z5W3 292 aaKnown RBP2.87□□□□□ -1.95
COPS3-213ENST00000577210 TBC1D3Q8IZP1 549 aaPredicted RBP2.87□□□□□ -1.95
COPS3-213ENST00000577210 MYRIPQ8NFW9 859 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 BCAS4Q8TDM0 211 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 HASPINQ8TF76 798 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 SH3KBP1Q96B97 665 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 GCC1Q96CN9 775 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 EDC3Q96F86 508 aaKnown RBP2.87□□□□□ -1.95
COPS3-213ENST00000577210 WDYHV1Q96HA8 205 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 TRAPPC9Q96Q05 1148 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 ASB2Q96Q27 587 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 PIGSQ96S52 555 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 NPAS1Q99742 590 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 KLK15Q9H2R5 256 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 EPS8L2Q9H6S3 715 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 ELAC1Q9H777 363 aaKnown RBP2.87□□□□□ -1.95
COPS3-213ENST00000577210 SFXN1Q9H9B4 322 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 RASSF1Q9NS23 344 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 SH3BP4Q9P0V3 963 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 PI4KBQ9UBF8 816 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 ARPP21Q9UBL0 812 aaPredicted RBP2.87□□□□□ -1.95
COPS3-213ENST00000577210 COX11Q9Y6N1 276 aa2.87□□□□□ -1.95
COPS3-213ENST00000577210 ZNF335Q9H4Z2 1342 aaPredicted RBP2.87□□□□□ -1.95
COPS3-213ENST00000577210 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.86□□□□□ -1.95
COPS3-213ENST00000577210 TMEM247A6NEH6 219 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 CLIC1O00299 241 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 ZNF213O14771 459 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 KIF1CO43896 1103 aaKnown RBP2.86□□□□□ -1.95
COPS3-213ENST00000577210 CCNT1O60563 726 aaKnown RBP2.86□□□□□ -1.95
COPS3-213ENST00000577210 TSPAN3O60637 253 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 WDHD1O75717 1129 aaPredicted RBP2.86□□□□□ -1.95
COPS3-213ENST00000577210 FAM155BO75949 473 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 CER1O95813 267 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 IGLV2-14P01704 120 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 PRKCGP05129 697 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 ENO1P06733 434 aaKnown RBP2.86□□□□□ -1.95
COPS3-213ENST00000577210 CYP3A4P08684 503 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 APEHP13798 732 aaKnown RBP2.86□□□□□ -1.95
COPS3-213ENST00000577210 CD38P28907 300 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 SERPINA4P29622 427 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 MCM5P33992 734 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 GRK5P34947 590 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 ADD2P35612 726 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 RENBPP51606 427 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 SLC12A2P55011 1212 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 INHBEP58166 350 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 ACTR2P61160 394 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 WDR5P61964 334 aaKnown RBP2.86□□□□□ -1.95
COPS3-213ENST00000577210 CYP4F2P78329 520 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 GPC5P78333 572 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 GRM4Q14833 912 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 ANKRD1Q15327 319 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 TAF12Q16514 161 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 RNASE12Q5GAN4 147 aaKnown RBP2.86□□□□□ -1.95
COPS3-213ENST00000577210 TTC22Q5TAA0 569 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 DGAT2L7PQ6IED9 249 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 SULT6B1Q6IMI4 303 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 GRHL2Q6ISB3 625 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 DPY19L3Q6ZPD9 716 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 ARHGEF25Q86VW2 580 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 PRIMA1Q86XR5 153 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 LAS2Q8IYD9 372 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 TMEM57Q8N5G2 664 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 BOLLQ8N9W6 283 aaKnown RBP2.86□□□□□ -1.95
COPS3-213ENST00000577210 FSIP1Q8NA03 581 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 FAM47BQ8NA70 645 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 SEMA6DQ8NFY4 1073 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 MAFAQ8NHW3 353 aaPredicted RBP2.86□□□□□ -1.95
COPS3-213ENST00000577210 STT3BQ8TCJ2 826 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 SLC22A17Q8WUG5 538 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 AKAP1Q92667 903 aaKnown RBP eCLIP2.86□□□□□ -1.95
COPS3-213ENST00000577210 KAT2BQ92831 832 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 C3orf49Q96BT1 292 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 ZG16BQ96DA0 208 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 P2RY11Q96G91 374 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 ZNF764Q96H86 408 aaPredicted RBP2.86□□□□□ -1.95
COPS3-213ENST00000577210 TBATAQ96M53 351 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 PYM1Q9BRP8 204 aaKnown RBP2.86□□□□□ -1.95
COPS3-213ENST00000577210 HTATIP2Q9BUP3 242 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 IKZF4Q9H2S9 585 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 TAF1DQ9H5J8 278 aaPredicted RBP2.86□□□□□ -1.95
COPS3-213ENST00000577210 CDCP1Q9H5V8 836 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 MLXIPQ9HAP2 919 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 G6PC2Q9NQR9 355 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 ABHD10Q9NUJ1 306 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 ARL8BQ9NVJ2 186 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 SEMA5BQ9P283 1151 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 PNMA2Q9UL42 364 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 CNTN6Q9UQ52 1028 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 DGKBQ9Y6T7 804 aa2.86□□□□□ -1.95
COPS3-213ENST00000577210 SALL3Q9BXA9 1300 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms