RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 ZDHHC4Q9NPG8 344 aa13.8□□□□□ -0.2
RPAIN-216ENST00000575599 ZSCAN32Q9NX65 697 aa13.8□□□□□ -0.2
RPAIN-216ENST00000575599 SYNJ2BP-COX16A0A087WUM0 186 aa13.79□□□□□ -0.2
RPAIN-216ENST00000575599 CHURC1-FNTBB4DL54 471 aa13.79□□□□□ -0.2
RPAIN-216ENST00000575599 K7ESF4 209 aa13.79□□□□□ -0.2
RPAIN-216ENST00000575599 HSF2BPO75031 334 aa13.79□□□□□ -0.2
RPAIN-216ENST00000575599 PAPSS2O95340 614 aaPredicted RBP13.79□□□□□ -0.2
RPAIN-216ENST00000575599 MOCS2O96007 188 aaPredicted RBP13.79□□□□□ -0.2
RPAIN-216ENST00000575599 IGLV3-27P01718 113 aa13.79□□□□□ -0.2
RPAIN-216ENST00000575599 TPM1P09493 284 aa13.79□□□□□ -0.2
RPAIN-216ENST00000575599 CDC25BP30305 580 aa13.79□□□□□ -0.2
RPAIN-216ENST00000575599 DGKGP49619 791 aa13.79□□□□□ -0.2
RPAIN-216ENST00000575599 NOMO3P69849 1222 aa13.79□□□□□ -0.2
RPAIN-216ENST00000575599 PITX1P78337 314 aaPredicted RBP13.79□□□□□ -0.2
RPAIN-216ENST00000575599 CDR2Q01850 454 aa13.79□□□□□ -0.2
RPAIN-216ENST00000575599 SLC6A3Q01959 620 aa13.79□□□□□ -0.2
RPAIN-216ENST00000575599 CCDC173Q0VFZ6 552 aa13.79□□□□□ -0.2
RPAIN-216ENST00000575599 C2CD6Q53TS8 623 aa13.79□□□□□ -0.2
RPAIN-216ENST00000575599 EFHC1Q5JVL4 640 aa13.79□□□□□ -0.2
RPAIN-216ENST00000575599 FYB2Q5VWT5 728 aa13.79□□□□□ -0.2
RPAIN-216ENST00000575599 BEND5Q7L4P6 421 aa13.79□□□□□ -0.2
RPAIN-216ENST00000575599 ERICH1Q86X53 443 aa13.79□□□□□ -0.2
RPAIN-216ENST00000575599 ZNF677Q86XU0 584 aa13.79□□□□□ -0.2
RPAIN-216ENST00000575599 UNC45BQ8IWX7 931 aa13.79□□□□□ -0.2
RPAIN-216ENST00000575599 FAM217AQ8IXS0 508 aa13.79□□□□□ -0.2
RPAIN-216ENST00000575599 CPXM2Q8N436 756 aa13.79□□□□□ -0.2
RPAIN-216ENST00000575599 CCDC33Q8N5R6 958 aa13.79□□□□□ -0.2
RPAIN-216ENST00000575599 PDCD7Q8N8D1 485 aaKnown RBP13.79□□□□□ -0.2
RPAIN-216ENST00000575599 MSANTD4Q8NCY6 345 aa13.79□□□□□ -0.2
RPAIN-216ENST00000575599 CPA5Q8WXQ8 436 aa13.79□□□□□ -0.2
RPAIN-216ENST00000575599 NKD2Q969F2 451 aaPredicted RBP13.79□□□□□ -0.2
RPAIN-216ENST00000575599 FCRL2Q96LA5 508 aaPredicted RBP13.79□□□□□ -0.2
RPAIN-216ENST00000575599 HHIPQ96QV1 700 aa13.79□□□□□ -0.2
RPAIN-216ENST00000575599 SEPT11Q9NVA2 429 aaKnown RBP13.79□□□□□ -0.2
RPAIN-216ENST00000575599 ASNSD1Q9NWL6 643 aa13.79□□□□□ -0.2
RPAIN-216ENST00000575599 COX16Q9P0S2 106 aa13.79□□□□□ -0.2
RPAIN-216ENST00000575599 TLR6Q9Y2C9 796 aa13.79□□□□□ -0.2
RPAIN-216ENST00000575599 PCDHGA2Q9Y5H1 932 aa13.79□□□□□ -0.2
RPAIN-216ENST00000575599 GOLGA6L7A0A1B0GV03 622 aa13.78□□□□□ -0.2
RPAIN-216ENST00000575599 IRAK2O43187 625 aa13.78□□□□□ -0.2
RPAIN-216ENST00000575599 DAB1O75553 588 aa13.78□□□□□ -0.2
RPAIN-216ENST00000575599 LATS1O95835 1130 aa13.78□□□□□ -0.2
RPAIN-216ENST00000575599 TRUB2O95900 331 aaKnown RBP13.78□□□□□ -0.2
RPAIN-216ENST00000575599 PENKP01210 267 aaPredicted RBP13.78□□□□□ -0.2
RPAIN-216ENST00000575599 PTMAP06454 111 aaKnown RBP13.78□□□□□ -0.2
RPAIN-216ENST00000575599 GLI1P08151 1106 aa13.78□□□□□ -0.2
RPAIN-216ENST00000575599 CHRNB2P17787 502 aa13.78□□□□□ -0.2
RPAIN-216ENST00000575599 PXNP49023 591 aaPredicted RBP13.78□□□□□ -0.2
RPAIN-216ENST00000575599 SLC11A2P49281 568 aa13.78□□□□□ -0.2
RPAIN-216ENST00000575599 FNTBP49356 437 aa13.78□□□□□ -0.2
RPAIN-216ENST00000575599 NRLP54845 237 aa13.78□□□□□ -0.2
RPAIN-216ENST00000575599 RNASE9P60153 205 aaKnown RBP13.78□□□□□ -0.2
RPAIN-216ENST00000575599 CDK17Q00537 523 aa13.78□□□□□ -0.2
RPAIN-216ENST00000575599 FMO1Q01740 532 aa13.78□□□□□ -0.2
RPAIN-216ENST00000575599 RING1Q06587 406 aa13.78□□□□□ -0.2
RPAIN-216ENST00000575599 NNTQ13423 1086 aa13.78□□□□□ -0.2
RPAIN-216ENST00000575599 DMC1Q14565 340 aa13.78□□□□□ -0.2
RPAIN-216ENST00000575599 ADGRF1Q5T601 910 aa13.78□□□□□ -0.2
RPAIN-216ENST00000575599 FAM102AQ5T9C2 384 aaPredicted RBP13.78□□□□□ -0.2
RPAIN-216ENST00000575599 EMC10Q5UCC4 262 aa13.78□□□□□ -0.2
RPAIN-216ENST00000575599 NUDT18Q6ZVK8 323 aa13.78□□□□□ -0.2
RPAIN-216ENST00000575599 SYT13Q7L8C5 426 aa13.78□□□□□ -0.2
RPAIN-216ENST00000575599 TMC6Q7Z403 805 aa13.78□□□□□ -0.2
RPAIN-216ENST00000575599 ZDHHC17Q8IUH5 632 aa13.78□□□□□ -0.2
RPAIN-216ENST00000575599 ALLCQ8N6M5 410 aa13.78□□□□□ -0.2
RPAIN-216ENST00000575599 C18orf8Q96DM3 657 aa13.78□□□□□ -0.2
RPAIN-216ENST00000575599 SLC2A13Q96QE2 648 aa13.78□□□□□ -0.2
RPAIN-216ENST00000575599 FAM126AQ9BYI3 521 aaPredicted RBP13.78□□□□□ -0.2
RPAIN-216ENST00000575599 DDIT4Q9NX09 232 aa13.78□□□□□ -0.2
RPAIN-216ENST00000575599 FANCMQ8IYD8 2048 aa13.78□□□□□ -0.2
RPAIN-216ENST00000575599 DMDP11532 3685 aa13.78□□□□□ -0.2
RPAIN-216ENST00000575599 USP34Q70CQ2 3546 aa13.77□□□□□ -0.2
RPAIN-216ENST00000575599 PROB1E7EW31 1015 aa13.77□□□□□ -0.21
RPAIN-216ENST00000575599 GOLGA8SH3BPF8 625 aa13.77□□□□□ -0.21
RPAIN-216ENST00000575599 ACSL4O60488 711 aa13.77□□□□□ -0.21
RPAIN-216ENST00000575599 GFRA3O60609 400 aa13.77□□□□□ -0.21
RPAIN-216ENST00000575599 KLF8O95600 359 aaPredicted RBP13.77□□□□□ -0.21
RPAIN-216ENST00000575599 APOEP02649 317 aa13.77□□□□□ -0.21
RPAIN-216ENST00000575599 SLC6A4P31645 630 aa13.77□□□□□ -0.21
RPAIN-216ENST00000575599 TNFRSF4P43489 277 aa13.77□□□□□ -0.21
RPAIN-216ENST00000575599 MRPS21P82921 87 aaKnown RBP13.77□□□□□ -0.21
RPAIN-216ENST00000575599 MPPE1Q53F39 396 aa13.77□□□□□ -0.21
RPAIN-216ENST00000575599 ZC3H12AQ5D1E8 599 aaKnown RBP13.77□□□□□ -0.21
RPAIN-216ENST00000575599 RFWD3Q6PCD5 774 aa13.77□□□□□ -0.21
RPAIN-216ENST00000575599 MMS22LQ6ZRQ5 1243 aa13.77□□□□□ -0.21
RPAIN-216ENST00000575599 SLC26A9Q7LBE3 791 aa13.77□□□□□ -0.21
RPAIN-216ENST00000575599 XYLT1Q86Y38 959 aa13.77□□□□□ -0.21
RPAIN-216ENST00000575599 ZNF513Q8N8E2 541 aaPredicted RBP13.77□□□□□ -0.21
RPAIN-216ENST00000575599 TXNDC5Q8NBS9 432 aaKnown RBP13.77□□□□□ -0.21
RPAIN-216ENST00000575599 SPC24Q8NBT2 197 aa13.77□□□□□ -0.21
RPAIN-216ENST00000575599 ZBTB44Q8NCP5 570 aa13.77□□□□□ -0.21
RPAIN-216ENST00000575599 NELL1Q92832 810 aa13.77□□□□□ -0.21
RPAIN-216ENST00000575599 SLC39A13Q96H72 371 aa13.77□□□□□ -0.21
RPAIN-216ENST00000575599 STOML2Q9UJZ1 356 aa13.77□□□□□ -0.21
RPAIN-216ENST00000575599 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.77□□□□□ -0.213e-6■□□□□ 9.2
RPAIN-216ENST00000575599 A0A0A0MRY4 1105 aa13.76□□□□□ -0.21
RPAIN-216ENST00000575599 A0A1W2PQC6 194 aa13.76□□□□□ -0.21
RPAIN-216ENST00000575599 PRR23AA6NEV1 266 aa13.76□□□□□ -0.21
RPAIN-216ENST00000575599 PRRT4C9JH25 899 aa13.76□□□□□ -0.21
RPAIN-216ENST00000575599 IGLV3-25P01717 112 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms