RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 ACER1Q8TDN7 264 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 ZBTB45Q96K62 511 aaPredicted RBP14.84□□□□□ -0.03
SMG6-215ENST00000574501 WRNIP1Q96S55 665 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 SLC2A11Q9BYW1 496 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 OSBPL6Q9BZF3 934 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 SEMA6AQ9H2E6 1030 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 COG4Q9H9E3 785 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 AGO4Q9HCK5 861 aaKnown RBP14.84□□□□□ -0.03
SMG6-215ENST00000574501 ANLNQ9NQW6 1124 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 MRPL11Q9Y3B7 192 aaKnown RBP14.84□□□□□ -0.03
SMG6-215ENST00000574501 AFG3L2Q9Y4W6 797 aa14.84□□□□□ -0.03
SMG6-215ENST00000574501 TMX2-CTNND1H3BSU7 103 aa14.83□□□□□ -0.04
SMG6-215ENST00000574501 RGL2O15211 777 aa14.83□□□□□ -0.04
SMG6-215ENST00000574501 SERPINE1P05121 402 aa14.83□□□□□ -0.04
SMG6-215ENST00000574501 TCN1P20061 433 aaPredicted RBP14.83□□□□□ -0.04
SMG6-215ENST00000574501 RPL10P27635 214 aaKnown RBP14.83□□□□□ -0.04
SMG6-215ENST00000574501 CDH15P55291 814 aa14.83□□□□□ -0.04
SMG6-215ENST00000574501 PDAP1Q13442 181 aaKnown RBP14.83□□□□□ -0.04
SMG6-215ENST00000574501 PPP2R5DQ14738 602 aa14.83□□□□□ -0.04
SMG6-215ENST00000574501 FAM182BQ5T319 152 aa14.83□□□□□ -0.04
SMG6-215ENST00000574501 PGBD4Q96DM1 585 aa14.83□□□□□ -0.04
SMG6-215ENST00000574501 HAUS8Q9BT25 410 aa14.83□□□□□ -0.04
SMG6-215ENST00000574501 EPS15L1Q9UBC2 864 aa14.83□□□□□ -0.04
SMG6-215ENST00000574501 EBF1Q9UH73 591 aa14.83□□□□□ -0.04
SMG6-215ENST00000574501 GOLGA8QA0A0J9YX86 632 aa14.83□□□□□ -0.04
SMG6-215ENST00000574501 C7orf72A4D263 438 aa14.83□□□□□ -0.04
SMG6-215ENST00000574501 GOLGA8OA6NCC3 632 aa14.83□□□□□ -0.04
SMG6-215ENST00000574501 GOLGA8NF8WBI6 632 aa14.83□□□□□ -0.04
SMG6-215ENST00000574501 STX16-NPEPL1H3BU86 382 aa14.83□□□□□ -0.04
SMG6-215ENST00000574501 TPP1O14773 563 aa14.83□□□□□ -0.04
SMG6-215ENST00000574501 GARTP22102 1010 aa14.83□□□□□ -0.04
SMG6-215ENST00000574501 ADORA2AP29274 412 aa14.83□□□□□ -0.04
SMG6-215ENST00000574501 LIG4P49917 911 aa14.83□□□□□ -0.04
SMG6-215ENST00000574501 SLC10A2Q12908 348 aaPredicted RBP14.83□□□□□ -0.04
SMG6-215ENST00000574501 PDE1CQ14123 709 aaPredicted RBP14.83□□□□□ -0.04
SMG6-215ENST00000574501 ADRM1Q16186 407 aa14.83□□□□□ -0.04
SMG6-215ENST00000574501 TKFCQ3LXA3 575 aa14.83□□□□□ -0.04
SMG6-215ENST00000574501 PPP1R2P3Q6NXS1 205 aa14.83□□□□□ -0.04
SMG6-215ENST00000574501 DSELQ8IZU8 1212 aa14.83□□□□□ -0.04
SMG6-215ENST00000574501 RSPH1Q8WYR4 309 aa14.83□□□□□ -0.04
SMG6-215ENST00000574501 DHX33Q9H6R0 707 aaKnown RBP14.83□□□□□ -0.04
SMG6-215ENST00000574501 SELENONQ9NZV5 590 aa14.83□□□□□ -0.04
SMG6-215ENST00000574501 TCEAL9Q9UHQ7 104 aa14.83□□□□□ -0.04
SMG6-215ENST00000574501 PLIN3O60664 434 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 ALDOAP04075 364 aaKnown RBP14.82□□□□□ -0.04
SMG6-215ENST00000574501 SLC5A3P53794 718 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 ABCE1P61221 599 aaKnown RBP14.82□□□□□ -0.04
SMG6-215ENST00000574501 CLDN10P78369 228 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 CREB5Q02930 508 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 RELAQ04206 551 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 TAZQ16635 292 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 ZNF423Q2M1K9 1284 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 PPM1JQ5JR12 505 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 WDR78Q5VTH9 848 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 SNX32Q86XE0 403 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 C4orf19Q8IY42 314 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 FAM156AQ8NDB6 213 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 ZSCAN18Q8TBC5 510 aaPredicted RBP14.82□□□□□ -0.04
SMG6-215ENST00000574501 MAPK15Q8TD08 544 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 TFAP2BQ92481 460 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 EME1Q96AY2 570 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 ABHD8Q96I13 439 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 KLHL32Q96NJ5 620 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 OR52B2Q96RD2 323 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 RANBP9Q96S59 729 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 TSPYL2Q9H2G4 693 aaPredicted RBP14.82□□□□□ -0.04
SMG6-215ENST00000574501 RBAKQ9NYW8 714 aaPredicted RBP14.82□□□□□ -0.04
SMG6-215ENST00000574501 PADI4Q9UM07 663 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 CNTN6Q9UQ52 1028 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 SIPA1L1O43166 1804 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 FAM159BA6NKW6 160 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 XPOTO43592 962 aaKnown RBP14.82□□□□□ -0.04
SMG6-215ENST00000574501 RNASEH2AO75792 299 aaKnown RBP14.82□□□□□ -0.04
SMG6-215ENST00000574501 LYPLA2O95372 231 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 STAMBPO95630 424 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 CST3P01034 146 aaPredicted RBP14.82□□□□□ -0.04
SMG6-215ENST00000574501 P4HA1P13674 534 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 FGFR3P22607 806 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 TBXAS1P24557 533 aaPredicted RBP14.82□□□□□ -0.04
SMG6-215ENST00000574501 MIPP30301 263 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 PFKPQ01813 784 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 TAP1Q03518 808 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 MTMR1Q13613 665 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 FSCBQ5H9T9 825 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 HHIPL2Q6UWX4 724 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 PTAR1Q7Z6K3 402 aaPredicted RBP14.82□□□□□ -0.04
SMG6-215ENST00000574501 LDHDQ86WU2 507 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 CHERPQ8IWX8 916 aaKnown RBP14.82□□□□□ -0.04
SMG6-215ENST00000574501 ZNF781Q8N8C0 355 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 ADAM32Q8TC27 787 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 APBB2Q92870 758 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 CEP170P1Q96L14 293 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 BIRC8Q96P09 236 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 SERPINI1Q99574 410 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 CORO1BQ9BR76 489 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 NUF2Q9BZD4 464 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 HAPLN2Q9GZV7 340 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 FBXO28Q9NVF7 368 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 ZNF358Q9NW07 568 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 AGO2Q9UKV8 859 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms