RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 ERCC5P28715 1186 aaPredicted RBP18.16■□□□□ 0.5
SMG6-214ENST00000573827 HLA-FP30511 346 aa18.16■□□□□ 0.5
SMG6-214ENST00000573827 IL12RB1P42701 662 aa18.16■□□□□ 0.5
SMG6-214ENST00000573827 PTGER3P43115 390 aa18.16■□□□□ 0.5
SMG6-214ENST00000573827 HARS2P49590 506 aaKnown RBP18.16■□□□□ 0.5
SMG6-214ENST00000573827 CREB5Q02930 508 aa18.16■□□□□ 0.5
SMG6-214ENST00000573827 RING1Q06587 406 aa18.16■□□□□ 0.5
SMG6-214ENST00000573827 EIF4EBP2Q13542 120 aaPredicted RBP18.16■□□□□ 0.5
SMG6-214ENST00000573827 EXOC3L4Q17RC7 722 aa18.16■□□□□ 0.5
SMG6-214ENST00000573827 NADSYN1Q6IA69 706 aa18.16■□□□□ 0.5
SMG6-214ENST00000573827 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.16■□□□□ 0.5
SMG6-214ENST00000573827 MYEOVQ96EZ4 313 aa18.16■□□□□ 0.5
SMG6-214ENST00000573827 LMLNQ96KR4 655 aa18.16■□□□□ 0.5
SMG6-214ENST00000573827 FCRL2Q96LA5 508 aaPredicted RBP18.16■□□□□ 0.5
SMG6-214ENST00000573827 MIS12Q9H081 205 aa18.16■□□□□ 0.5
SMG6-214ENST00000573827 SLC6A17Q9H1V8 727 aa18.16■□□□□ 0.5
SMG6-214ENST00000573827 CD93Q9NPY3 652 aa18.16■□□□□ 0.5
SMG6-214ENST00000573827 STON1Q9Y6Q2 735 aa18.16■□□□□ 0.5
SMG6-214ENST00000573827 ASCC3Q8N3C0 2202 aaKnown RBP18.16■□□□□ 0.5
SMG6-214ENST00000573827 MUC22E2RYF6 1773 aaPredicted RBP18.15■□□□□ 0.5
SMG6-214ENST00000573827 TSPAN3O60637 253 aa18.15■□□□□ 0.5
SMG6-214ENST00000573827 CAVIN2O95810 425 aa18.15■□□□□ 0.5
SMG6-214ENST00000573827 IGLV3-25P01717 112 aa18.15■□□□□ 0.5
SMG6-214ENST00000573827 GNA15P30679 374 aa18.15■□□□□ 0.5
SMG6-214ENST00000573827 SLC6A4P31645 630 aa18.15■□□□□ 0.5
SMG6-214ENST00000573827 PDCLQ13371 301 aa18.15■□□□□ 0.5
SMG6-214ENST00000573827 MAN2A1Q16706 1144 aa18.15■□□□□ 0.5
SMG6-214ENST00000573827 MPPE1Q53F39 396 aa18.15■□□□□ 0.5
SMG6-214ENST00000573827 SPDYCQ5MJ68 293 aa18.15■□□□□ 0.5
SMG6-214ENST00000573827 SYPL2Q5VXT5 272 aa18.15■□□□□ 0.5
SMG6-214ENST00000573827 PEAR1Q5VY43 1037 aaPredicted RBP18.15■□□□□ 0.5
SMG6-214ENST00000573827 ANKS1BQ7Z6G8 1248 aa18.15■□□□□ 0.5
SMG6-214ENST00000573827 DDI1Q8WTU0 396 aa18.15■□□□□ 0.5
SMG6-214ENST00000573827 SORCS1Q8WY21 1168 aa18.15■□□□□ 0.5
SMG6-214ENST00000573827 AZIN2Q96A70 460 aa18.15■□□□□ 0.5
SMG6-214ENST00000573827 MRGPRX1Q96LB2 322 aa18.15■□□□□ 0.5
SMG6-214ENST00000573827 NUP62CLQ9H1M0 184 aa18.15■□□□□ 0.5
SMG6-214ENST00000573827 ELOVL2Q9NXB9 296 aa18.15■□□□□ 0.5
SMG6-214ENST00000573827 BCCIPQ9P287 314 aaKnown RBP eCLIP18.15■□□□□ 0.5
SMG6-214ENST00000573827 NAALADL1Q9UQQ1 740 aa18.15■□□□□ 0.5
SMG6-214ENST00000573827 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.14■□□□□ 0.49
SMG6-214ENST00000573827 IGHV1OR15-9A0A0B4J2B8 117 aa18.14■□□□□ 0.49
SMG6-214ENST00000573827 GOLGA6L7A0A1B0GV03 622 aa18.14■□□□□ 0.49
SMG6-214ENST00000573827 LNP1A1A4G5 178 aa18.14■□□□□ 0.49
SMG6-214ENST00000573827 PATE3B3GLJ2 98 aa18.14■□□□□ 0.49
SMG6-214ENST00000573827 E5RJQ4 531 aa18.14■□□□□ 0.49
SMG6-214ENST00000573827 ZNF445P59923 1031 aa18.14■□□□□ 0.49
SMG6-214ENST00000573827 NNTQ13423 1086 aa18.14■□□□□ 0.49
SMG6-214ENST00000573827 EIF4HQ15056 248 aaKnown RBP18.14■□□□□ 0.49
SMG6-214ENST00000573827 ARHGAP44Q17R89 818 aa18.14■□□□□ 0.49
SMG6-214ENST00000573827 AASDHQ4L235 1098 aaPredicted RBP18.14■□□□□ 0.49
SMG6-214ENST00000573827 STPG1Q5TH74 334 aa18.14■□□□□ 0.49
SMG6-214ENST00000573827 PIK3R6Q5UE93 754 aa18.14■□□□□ 0.49
SMG6-214ENST00000573827 RBM43Q6ZSC3 357 aaKnown RBP18.14■□□□□ 0.49
SMG6-214ENST00000573827 TAC4Q86UU9 113 aa18.14■□□□□ 0.49
SMG6-214ENST00000573827 ADIPOR2Q86V24 386 aa18.14■□□□□ 0.49
SMG6-214ENST00000573827 TMEFF1Q8IYR6 380 aa18.14■□□□□ 0.49
SMG6-214ENST00000573827 WFDC5Q8TCV5 224 aa18.14■□□□□ 0.49
SMG6-214ENST00000573827 ERLEC1Q96DZ1 483 aa18.14■□□□□ 0.49
SMG6-214ENST00000573827 FAM81BQ96LP2 452 aa18.14■□□□□ 0.49
SMG6-214ENST00000573827 PRICKLE1Q96MT3 831 aaPredicted RBP18.14■□□□□ 0.49
SMG6-214ENST00000573827 IRX2Q9BZI1 471 aaPredicted RBP18.14■□□□□ 0.49
SMG6-214ENST00000573827 MKRN2Q9H000 416 aaKnown RBP18.14■□□□□ 0.49
SMG6-214ENST00000573827 TMEM74BQ9NUR3 256 aa18.14■□□□□ 0.49
SMG6-214ENST00000573827 MAP1BP46821 2468 aaKnown RBP18.14■□□□□ 0.49
SMG6-214ENST00000573827 NPC1O15118 1278 aa18.13■□□□□ 0.49
SMG6-214ENST00000573827 THAP12O43422 761 aa18.13■□□□□ 0.49
SMG6-214ENST00000573827 ACSL4O60488 711 aa18.13■□□□□ 0.49
SMG6-214ENST00000573827 CYBBP04839 570 aa18.13■□□□□ 0.49
SMG6-214ENST00000573827 NCAM1P13591 858 aa18.13■□□□□ 0.49
SMG6-214ENST00000573827 CLCN1P35523 988 aa18.13■□□□□ 0.49
SMG6-214ENST00000573827 ACADSBP45954 432 aa18.13■□□□□ 0.49
SMG6-214ENST00000573827 MTIF2P46199 727 aaKnown RBP18.13■□□□□ 0.49
SMG6-214ENST00000573827 TBX4P57082 545 aa18.13■□□□□ 0.49
SMG6-214ENST00000573827 PITX1P78337 314 aaPredicted RBP18.13■□□□□ 0.49
SMG6-214ENST00000573827 KCNMA1Q12791 1236 aa18.13■□□□□ 0.49
SMG6-214ENST00000573827 ZNF234Q14588 700 aa18.13■□□□□ 0.49
SMG6-214ENST00000573827 TAF5Q15542 800 aa18.13■□□□□ 0.49
SMG6-214ENST00000573827 FUT11Q495W5 492 aa18.13■□□□□ 0.49
SMG6-214ENST00000573827 MPP7Q5T2T1 576 aa18.13■□□□□ 0.49
SMG6-214ENST00000573827 NUGGCQ68CJ6 796 aa18.13■□□□□ 0.49
SMG6-214ENST00000573827 RFWD3Q6PCD5 774 aa18.13■□□□□ 0.49
SMG6-214ENST00000573827 LPCAT2Q7L5N7 544 aa18.13■□□□□ 0.49
SMG6-214ENST00000573827 METTL3Q86U44 580 aaKnown RBP18.13■□□□□ 0.49
SMG6-214ENST00000573827 C12orf50Q8NA57 414 aaPredicted RBP18.13■□□□□ 0.49
SMG6-214ENST00000573827 GPT2Q8TD30 523 aa18.13■□□□□ 0.49
SMG6-214ENST00000573827 TMA16Q96EY4 203 aaKnown RBP18.13■□□□□ 0.49
SMG6-214ENST00000573827 SPACA7Q96KW9 195 aa18.13■□□□□ 0.49
SMG6-214ENST00000573827 CPXM1Q96SM3 734 aa18.13■□□□□ 0.49
SMG6-214ENST00000573827 NDST4Q9H3R1 872 aa18.13■□□□□ 0.49
SMG6-214ENST00000573827 ST7Q9NRC1 585 aa18.13■□□□□ 0.49
SMG6-214ENST00000573827 SAMSN1Q9NSI8 373 aaKnown RBP18.13■□□□□ 0.49
SMG6-214ENST00000573827 PCDHGC3Q9UN70 934 aa18.13■□□□□ 0.49
SMG6-214ENST00000573827 USP24Q9UPU5 2620 aa18.12■□□□□ 0.49
SMG6-214ENST00000573827 FOXN3O00409 490 aaPredicted RBP18.12■□□□□ 0.49
SMG6-214ENST00000573827 SART1O43290 800 aaKnown RBP18.12■□□□□ 0.49
SMG6-214ENST00000573827 MED7O43513 233 aa18.12■□□□□ 0.49
SMG6-214ENST00000573827 PNMA6AP0CW24 399 aaPredicted RBP18.12■□□□□ 0.49
SMG6-214ENST00000573827 PRKCHP24723 683 aa18.12■□□□□ 0.49
SMG6-214ENST00000573827 DHPSP49366 369 aaPredicted RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms