RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 TLE6Q9H808 572 aa14.18□□□□□ -0.14
CCDC40-209ENST00000573474 IL21Q9HBE4 155 aa14.18□□□□□ -0.14
CCDC40-209ENST00000573474 R3HDM2Q9Y2K5 976 aaKnown RBP14.18□□□□□ -0.14
CCDC40-209ENST00000573474 EPOPA6NHQ4 379 aa14.17□□□□□ -0.14
CCDC40-209ENST00000573474 I6L893 689 aaPredicted RBP14.17□□□□□ -0.14
CCDC40-209ENST00000573474 EEF2KO00418 725 aaKnown RBP14.17□□□□□ -0.14
CCDC40-209ENST00000573474 APOL1O14791 398 aa14.17□□□□□ -0.14
CCDC40-209ENST00000573474 COCHO43405 550 aa14.17□□□□□ -0.14
CCDC40-209ENST00000573474 XYLBO75191 536 aa14.17□□□□□ -0.14
CCDC40-209ENST00000573474 PAGE1O75459 146 aa14.17□□□□□ -0.14
CCDC40-209ENST00000573474 OAS1P00973 400 aaKnown RBP14.17□□□□□ -0.14
CCDC40-209ENST00000573474 IGLV3-27P01718 113 aa14.17□□□□□ -0.14
CCDC40-209ENST00000573474 POU2F2P09086 479 aa14.17□□□□□ -0.14
CCDC40-209ENST00000573474 RHOXF2BP0C7M4 288 aa14.17□□□□□ -0.14
CCDC40-209ENST00000573474 GOT1P17174 413 aa14.17□□□□□ -0.14
CCDC40-209ENST00000573474 PTPN2P17706 415 aa14.17□□□□□ -0.14
CCDC40-209ENST00000573474 CDC25CP30307 473 aa14.17□□□□□ -0.14
CCDC40-209ENST00000573474 FNTAP49354 379 aa14.17□□□□□ -0.14
CCDC40-209ENST00000573474 DYNLT1P63172 113 aa14.17□□□□□ -0.14
CCDC40-209ENST00000573474 COG7P83436 770 aa14.17□□□□□ -0.14
CCDC40-209ENST00000573474 SEMA3BQ13214 749 aa14.17□□□□□ -0.14
CCDC40-209ENST00000573474 NAA30Q147X3 362 aaPredicted RBP14.17□□□□□ -0.14
CCDC40-209ENST00000573474 DUSP6Q16828 381 aa14.17□□□□□ -0.14
CCDC40-209ENST00000573474 ACBD5Q5T8D3 534 aaPredicted RBP14.17□□□□□ -0.14
CCDC40-209ENST00000573474 SLC9A4Q6AI14 798 aa14.17□□□□□ -0.14
CCDC40-209ENST00000573474 C8orf74Q6P047 294 aa14.17□□□□□ -0.14
CCDC40-209ENST00000573474 DRICH1Q6PGQ1 229 aaPredicted RBP14.17□□□□□ -0.14
CCDC40-209ENST00000573474 MAATS1Q7Z4T9 603 aa14.17□□□□□ -0.14
CCDC40-209ENST00000573474 ADGRD2Q7Z7M1 963 aa14.17□□□□□ -0.14
CCDC40-209ENST00000573474 RBM23Q86U06 439 aaKnown RBP14.17□□□□□ -0.14
CCDC40-209ENST00000573474 UNC45BQ8IWX7 931 aa14.17□□□□□ -0.14
CCDC40-209ENST00000573474 HS6ST3Q8IZP7 471 aa14.17□□□□□ -0.14
CCDC40-209ENST00000573474 PQLC3Q8N755 202 aa14.17□□□□□ -0.14
CCDC40-209ENST00000573474 ATP6V0D2Q8N8Y2 350 aa14.17□□□□□ -0.14
CCDC40-209ENST00000573474 MRPS31Q92665 395 aaKnown RBP14.17□□□□□ -0.14
CCDC40-209ENST00000573474 C1orf74Q96LT6 269 aa14.17□□□□□ -0.14
CCDC40-209ENST00000573474 GCNAQ96QF7 691 aa14.17□□□□□ -0.14
CCDC40-209ENST00000573474 CDCA3Q99618 268 aaPredicted RBP14.17□□□□□ -0.14
CCDC40-209ENST00000573474 EPAS1Q99814 870 aa14.17□□□□□ -0.14
CCDC40-209ENST00000573474 RHOXF2Q9BQY4 288 aa14.17□□□□□ -0.14
CCDC40-209ENST00000573474 CORO1BQ9BR76 489 aa14.17□□□□□ -0.14
CCDC40-209ENST00000573474 LRRC1Q9BTT6 524 aa14.17□□□□□ -0.14
CCDC40-209ENST00000573474 PRO3102Q9H379 93 aa14.17□□□□□ -0.14
CCDC40-209ENST00000573474 ASAH2Q9NR71 780 aa14.17□□□□□ -0.14
CCDC40-209ENST00000573474 ZDHHC7Q9NXF8 308 aa14.17□□□□□ -0.14
CCDC40-209ENST00000573474 OR12D3Q9UGF7 316 aa14.17□□□□□ -0.14
CCDC40-209ENST00000573474 PCYOX1Q9UHG3 505 aa14.17□□□□□ -0.14
CCDC40-209ENST00000573474 FEZ2Q9UHY8 353 aaPredicted RBP14.17□□□□□ -0.14
CCDC40-209ENST00000573474 TARSL2A2RTX5 802 aaKnown RBP14.16□□□□□ -0.14
CCDC40-209ENST00000573474 C2orf78A6NCI8 922 aa14.16□□□□□ -0.14
CCDC40-209ENST00000573474 FAM72CH0Y354 149 aa14.16□□□□□ -0.14
CCDC40-209ENST00000573474 APOC4-APOC2K7ER74 178 aa14.16□□□□□ -0.14
CCDC40-209ENST00000573474 DAPK3O43293 454 aa14.16□□□□□ -0.14
CCDC40-209ENST00000573474 CREB3O43889 395 aa14.16□□□□□ -0.14
CCDC40-209ENST00000573474 RFPL2O75678 378 aa14.16□□□□□ -0.14
CCDC40-209ENST00000573474 APOC2P02655 101 aa14.16□□□□□ -0.14
CCDC40-209ENST00000573474 TGM2P21980 687 aa14.16□□□□□ -0.14
CCDC40-209ENST00000573474 AMPD1P23109 780 aa14.16□□□□□ -0.14
CCDC40-209ENST00000573474 GABRR2P28476 465 aa14.16□□□□□ -0.14
CCDC40-209ENST00000573474 HTR7P34969 479 aa14.16□□□□□ -0.14
CCDC40-209ENST00000573474 EPHA5P54756 1037 aa14.16□□□□□ -0.14
CCDC40-209ENST00000573474 NRG1Q02297 640 aaPredicted RBP14.16□□□□□ -0.14
CCDC40-209ENST00000573474 DPYSQ14117 519 aa14.16□□□□□ -0.14
CCDC40-209ENST00000573474 DHX34Q14147 1143 aaKnown RBP14.16□□□□□ -0.14
CCDC40-209ENST00000573474 FAM72AQ5TYM5 149 aa14.16□□□□□ -0.14
CCDC40-209ENST00000573474 NUGGCQ68CJ6 796 aa14.16□□□□□ -0.14
CCDC40-209ENST00000573474 FAM72DQ6L9T8 149 aa14.16□□□□□ -0.14
CCDC40-209ENST00000573474 TTC27Q6P3X3 843 aa14.16□□□□□ -0.14
CCDC40-209ENST00000573474 CCDC137Q6PK04 289 aaKnown RBP14.16□□□□□ -0.14
CCDC40-209ENST00000573474 CHRDL2Q6WN34 429 aa14.16□□□□□ -0.14
CCDC40-209ENST00000573474 RFX8Q6ZV50 586 aa14.16□□□□□ -0.14
CCDC40-209ENST00000573474 GAREM2Q75VX8 874 aa14.16□□□□□ -0.14
CCDC40-209ENST00000573474 FAM72BQ86X60 149 aa14.16□□□□□ -0.14
CCDC40-209ENST00000573474 PLD5Q8N7P1 536 aa14.16□□□□□ -0.14
CCDC40-209ENST00000573474 PPP2R3CQ969Q6 453 aa14.16□□□□□ -0.14
CCDC40-209ENST00000573474 MRPL38Q96DV4 380 aaKnown RBP14.16□□□□□ -0.14
CCDC40-209ENST00000573474 BTN2A3PQ96KV6 586 aa14.16□□□□□ -0.14
CCDC40-209ENST00000573474 SIK2Q9H0K1 926 aa14.16□□□□□ -0.14
CCDC40-209ENST00000573474 STIM2Q9P246 746 aa14.16□□□□□ -0.14
CCDC40-209ENST00000573474 AMACRQ9UHK6 382 aa14.16□□□□□ -0.14
CCDC40-209ENST00000573474 HCFC2Q9Y5Z7 792 aa14.16□□□□□ -0.14
CCDC40-209ENST00000573474 FAM187AA6NFU0 413 aa14.15□□□□□ -0.14
CCDC40-209ENST00000573474 RAD51CO43502 376 aa14.15□□□□□ -0.14
CCDC40-209ENST00000573474 LIASO43766 372 aa14.15□□□□□ -0.14
CCDC40-209ENST00000573474 MOCS2O96007 188 aaPredicted RBP14.15□□□□□ -0.14
CCDC40-209ENST00000573474 TUBBP07437 444 aa14.15□□□□□ -0.14
CCDC40-209ENST00000573474 HMBSP08397 361 aa14.15□□□□□ -0.14
CCDC40-209ENST00000573474 MYL4P12829 197 aa14.15□□□□□ -0.14
CCDC40-209ENST00000573474 PFKLP17858 780 aa14.15□□□□□ -0.14
CCDC40-209ENST00000573474 NRIP1P48552 1158 aa14.15□□□□□ -0.14
CCDC40-209ENST00000573474 MLLT6P55198 1093 aaPredicted RBP14.15□□□□□ -0.14
CCDC40-209ENST00000573474 TPI1P60174 286 aa14.15□□□□□ -0.14
CCDC40-209ENST00000573474 DR1Q01658 176 aa14.15□□□□□ -0.14
CCDC40-209ENST00000573474 OTUD4Q01804 1114 aaKnown RBP14.15□□□□□ -0.14
CCDC40-209ENST00000573474 LMNB2Q03252 620 aa14.15□□□□□ -0.14
CCDC40-209ENST00000573474 SNX1Q13596 522 aa14.15□□□□□ -0.14
CCDC40-209ENST00000573474 ELF2Q15723 593 aa14.15□□□□□ -0.14
CCDC40-209ENST00000573474 CCDC105Q8IYK2 499 aa14.15□□□□□ -0.14
CCDC40-209ENST00000573474 LEMD2Q8NC56 503 aa14.15□□□□□ -0.14
CCDC40-209ENST00000573474 ATL2Q8NHH9 583 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms