RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 TBX4P57082 545 aa10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 ZNF445P59923 1031 aa10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 EIF4HQ15056 248 aaKnown RBP10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 ARHGAP44Q17R89 818 aa10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 UAP1L1Q3KQV9 507 aa10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 TRIM61Q5EBN2 209 aa10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 DAB2IPQ5VWQ8 1189 aa10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 NUGGCQ68CJ6 796 aa10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 CACUL1Q86Y37 369 aa10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 SYT12Q8IV01 421 aa10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 UNC45BQ8IWX7 931 aa10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 RGL4Q8IZJ4 473 aa10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 SCML4Q8N228 414 aa10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 SLC35F5Q8WV83 523 aa10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 P2RY11Q96G91 374 aa10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 KREMEN1Q96MU8 473 aa10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 ZSWIM1Q9BR11 485 aa10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 SLC2A11Q9BYW1 496 aa10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 SLC6A17Q9H1V8 727 aa10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 TMEM9BQ9NQ34 198 aa10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 THAP10Q9P2Z0 257 aaPredicted RBP10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 FBXO10Q9UK96 956 aa10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 ASCC3Q8N3C0 2202 aaKnown RBP10.06□□□□□ -0.8
NPLOC4-212ENST00000573328 IGHV1OR15-9A0A0B4J2B8 117 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 PES1O00541 588 aaKnown RBP10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 NPC1O15118 1278 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 SART1O43290 800 aaKnown RBP10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 TBL1XO60907 577 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 LATS1O95835 1130 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 MOCS2O96007 188 aaPredicted RBP10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 EPHX1P07099 455 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 ADRB1P08588 477 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 ACADMP11310 421 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 ITPKAP23677 461 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 HOXD9P28356 352 aaPredicted RBP10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 ANP32AP39687 249 aaKnown RBP10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 ACADSBP45954 432 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 MAPK8P45983 427 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 SLC11A2P49281 568 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 ATXN3P54252 364 aaPredicted RBP10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 ZNF33AQ06730 810 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 LMAN2Q12907 356 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 ZNF234Q14588 700 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 EXOC3L4Q17RC7 722 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 FUT11Q495W5 492 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 FNDC3BQ53EP0 1204 aaKnown RBP10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 SPDYCQ5MJ68 293 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 ADGRF1Q5T601 910 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 MSANTD2Q6P1R3 559 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 RFWD3Q6PCD5 774 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 GJB7Q6PEY0 223 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 TRIM65Q6PJ69 517 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 SERPINA13PQ6UXR4 307 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 GBP6Q6ZN66 633 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 CHST9Q7L1S5 443 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 ENOSF1Q7L5Y1 443 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 CCDC117Q8IWD4 279 aaPredicted RBP10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 FAM114A1Q8IWE2 563 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 FAM217AQ8IXS0 508 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 WFIKKN2Q8TEU8 576 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 SORCS1Q8WY21 1168 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 TMA16Q96EY4 203 aaKnown RBP10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 PIWIL1Q96J94 861 aaKnown RBP10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 FAM81BQ96LP2 452 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 HSPA12BQ96MM6 686 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 SERPINB11Q96P15 392 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 PRDM16Q9HAZ2 1276 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 CD93Q9NPY3 652 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 ELOVL2Q9NXB9 296 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 CLEC4EQ9ULY5 219 aa10.05□□□□□ -0.8
NPLOC4-212ENST00000573328 MEI4A8MW99 385 aa10.04□□□□□ -0.8
NPLOC4-212ENST00000573328 ACSL4O60488 711 aa10.04□□□□□ -0.8
NPLOC4-212ENST00000573328 APOEP02649 317 aa10.04□□□□□ -0.8
NPLOC4-212ENST00000573328 HLA-EP13747 358 aa10.04□□□□□ -0.8
NPLOC4-212ENST00000573328 PRKCSHP14314 528 aaPredicted RBP10.04□□□□□ -0.8
NPLOC4-212ENST00000573328 SLC9A1P19634 815 aa10.04□□□□□ -0.8
NPLOC4-212ENST00000573328 GPD2P43304 727 aa10.04□□□□□ -0.8
NPLOC4-212ENST00000573328 NOVA1P51513 510 aaKnown RBP10.04□□□□□ -0.8
NPLOC4-212ENST00000573328 SGSHP51688 502 aa10.04□□□□□ -0.8
NPLOC4-212ENST00000573328 IRX4P78413 519 aa10.04□□□□□ -0.8
NPLOC4-212ENST00000573328 PSAPL1Q6NUJ1 521 aa10.04□□□□□ -0.8
NPLOC4-212ENST00000573328 DENND1BQ6P3S1 775 aa10.04□□□□□ -0.8
NPLOC4-212ENST00000573328 RABEPKQ7Z6M1 372 aa10.04□□□□□ -0.8
NPLOC4-212ENST00000573328 MFN1Q8IWA4 741 aa10.04□□□□□ -0.8
NPLOC4-212ENST00000573328 SCUBE3Q8IX30 993 aa10.04□□□□□ -0.8
NPLOC4-212ENST00000573328 AHI1Q8N157 1196 aa10.04□□□□□ -0.8
NPLOC4-212ENST00000573328 MLKLQ8NB16 471 aa10.04□□□□□ -0.8
NPLOC4-212ENST00000573328 HJURPQ8NCD3 748 aaPredicted RBP10.04□□□□□ -0.8
NPLOC4-212ENST00000573328 ADAM32Q8TC27 787 aa10.04□□□□□ -0.8
NPLOC4-212ENST00000573328 DQX1Q8TE96 717 aaKnown RBP10.04□□□□□ -0.8
NPLOC4-212ENST00000573328 CYB5D2Q8WUJ1 264 aa10.04□□□□□ -0.8
NPLOC4-212ENST00000573328 PRCCQ92733 491 aaPredicted RBP10.04□□□□□ -0.8
NPLOC4-212ENST00000573328 SIPA1Q96FS4 1042 aa10.04□□□□□ -0.8
NPLOC4-212ENST00000573328 MRGPRX1Q96LB2 322 aa10.04□□□□□ -0.8
NPLOC4-212ENST00000573328 DDX50Q9BQ39 737 aaKnown RBP10.04□□□□□ -0.8
NPLOC4-212ENST00000573328 TRIM62Q9BVG3 475 aa10.04□□□□□ -0.8
NPLOC4-212ENST00000573328 GTPBP2Q9BX10 602 aaKnown RBP10.04□□□□□ -0.8
NPLOC4-212ENST00000573328 NUP62CLQ9H1M0 184 aa10.04□□□□□ -0.8
NPLOC4-212ENST00000573328 CLSTN2Q9H4D0 955 aa10.04□□□□□ -0.8
NPLOC4-212ENST00000573328 TMEM74BQ9NUR3 256 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms