RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 GRAP2O75791 330 aa8.11□□□□□ -1.11
SMG6-211ENST00000572369 APODP05090 189 aa8.11□□□□□ -1.11
SMG6-211ENST00000572369 CHRNB1P11230 501 aa8.11□□□□□ -1.11
SMG6-211ENST00000572369 FERP16591 822 aa8.11□□□□□ -1.11
SMG6-211ENST00000572369 SPINK2P20155 84 aa8.11□□□□□ -1.11
SMG6-211ENST00000572369 GBP1P32455 592 aa8.11□□□□□ -1.11
SMG6-211ENST00000572369 TBX4P57082 545 aa8.11□□□□□ -1.11
SMG6-211ENST00000572369 JAM2P57087 298 aa8.11□□□□□ -1.11
SMG6-211ENST00000572369 RNASE9P60153 205 aaKnown RBP8.11□□□□□ -1.11
SMG6-211ENST00000572369 YWHAZP63104 245 aaKnown RBP8.11□□□□□ -1.11
SMG6-211ENST00000572369 CDR2Q01850 454 aa8.11□□□□□ -1.11
SMG6-211ENST00000572369 KDSRQ06136 332 aa8.11□□□□□ -1.11
SMG6-211ENST00000572369 CCDC6Q16204 474 aa8.11□□□□□ -1.11
SMG6-211ENST00000572369 DCAF6Q58WW2 860 aa8.11□□□□□ -1.11
SMG6-211ENST00000572369 RHBDF2Q6PJF5 856 aa8.11□□□□□ -1.11
SMG6-211ENST00000572369 PRR23CQ6ZRP0 262 aa8.11□□□□□ -1.11
SMG6-211ENST00000572369 BHLHA9Q7RTU4 235 aa8.11□□□□□ -1.11
SMG6-211ENST00000572369 APTXQ7Z2E3 356 aaKnown RBP8.11□□□□□ -1.11
SMG6-211ENST00000572369 TMEM110Q86TL2 294 aa8.11□□□□□ -1.11
SMG6-211ENST00000572369 ZNF677Q86XU0 584 aa8.11□□□□□ -1.11
SMG6-211ENST00000572369 TMEM25Q86YD3 366 aa8.11□□□□□ -1.11
SMG6-211ENST00000572369 UNC45BQ8IWX7 931 aa8.11□□□□□ -1.11
SMG6-211ENST00000572369 WDTC1Q8N5D0 677 aa8.11□□□□□ -1.11
SMG6-211ENST00000572369 ZBTB44Q8NCP5 570 aa8.11□□□□□ -1.11
SMG6-211ENST00000572369 RNF214Q8ND24 703 aa8.11□□□□□ -1.11
SMG6-211ENST00000572369 CCDC26Q8TAB7 109 aa8.11□□□□□ -1.11
SMG6-211ENST00000572369 EPS8L1Q8TE68 723 aa8.11□□□□□ -1.11
SMG6-211ENST00000572369 BHMTQ93088 406 aa8.11□□□□□ -1.11
SMG6-211ENST00000572369 RNF34Q969K3 372 aa8.11□□□□□ -1.11
SMG6-211ENST00000572369 C18orf8Q96DM3 657 aa8.11□□□□□ -1.11
SMG6-211ENST00000572369 NAP1L5Q96NT1 182 aaPredicted RBP8.11□□□□□ -1.11
SMG6-211ENST00000572369 XPO6Q96QU8 1125 aaKnown RBP8.11□□□□□ -1.11
SMG6-211ENST00000572369 PNKPQ96T60 521 aa8.11□□□□□ -1.11
SMG6-211ENST00000572369 RXFP3Q9NSD7 469 aa8.11□□□□□ -1.11
SMG6-211ENST00000572369 WDR35Q9P2L0 1181 aa8.11□□□□□ -1.11
SMG6-211ENST00000572369 TJP2Q9UDY2 1190 aa8.11□□□□□ -1.11
SMG6-211ENST00000572369 WASF3Q9UPY6 502 aa8.11□□□□□ -1.11
SMG6-211ENST00000572369 NAALADL1Q9UQQ1 740 aa8.11□□□□□ -1.11
SMG6-211ENST00000572369 KIAA1549LQ6ZVL6 1849 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 SYNJ2BP-COX16A0A087WUM0 186 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 A0A1W2PQC6 194 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 TYW5A2RUC4 315 aaKnown RBP8.1□□□□□ -1.11
SMG6-211ENST00000572369 TBC1D3BA6NDS4 549 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 SHISA7A6NL88 538 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.1□□□□□ -1.11
SMG6-211ENST00000572369 GOLGA8SH3BPF8 625 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 MAP3K13O43283 966 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 CBFA2T2O43439 604 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 TSPAN3O60637 253 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 LILRB5O75023 590 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 HSF2BPO75031 334 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 ATG13O75143 517 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 GABBR2O75899 941 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 LSM8O95777 96 aaKnown RBP8.1□□□□□ -1.11
SMG6-211ENST00000572369 MOCS2O96007 188 aaPredicted RBP8.1□□□□□ -1.11
SMG6-211ENST00000572369 EGFP01133 1207 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 APOEP02649 317 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 ERBB2P04626 1255 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 TYRP14679 529 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 TNFAIP3P21580 790 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 NSFP46459 744 aaKnown RBP8.1□□□□□ -1.11
SMG6-211ENST00000572369 RPL34P49207 117 aaKnown RBP8.1□□□□□ -1.11
SMG6-211ENST00000572369 SLC11A2P49281 568 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 SEC13P55735 322 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 CDK17Q00537 523 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 SLC6A3Q01959 620 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 CSTF1Q05048 431 aaKnown RBP8.1□□□□□ -1.11
SMG6-211ENST00000572369 FOXC1Q12948 553 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 MTAPQ13126 283 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 TRIP4Q15650 581 aaPredicted RBP8.1□□□□□ -1.11
SMG6-211ENST00000572369 FBXO43Q4G163 708 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 PTPN20Q4JDL3 420 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 TMEM196Q5HYL7 178 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 FAM102AQ5T9C2 384 aaPredicted RBP8.1□□□□□ -1.11
SMG6-211ENST00000572369 SFMBT2Q5VUG0 894 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 SYPL2Q5VXT5 272 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 NAA35Q5VZE5 725 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 NUGGCQ68CJ6 796 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 FSTL4Q6MZW2 842 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 MSANTD2Q6P1R3 559 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 TRIM72Q6ZMU5 477 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 FAM183BPQ6ZVS7 135 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 ZDHHC17Q8IUH5 632 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 DEFB106AQ8N104 65 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 SYNPOQ8N3V7 929 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 ZNF397Q8NF99 534 aaPredicted RBP8.1□□□□□ -1.11
SMG6-211ENST00000572369 DQX1Q8TE96 717 aaKnown RBP8.1□□□□□ -1.11
SMG6-211ENST00000572369 DDI1Q8WTU0 396 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 SLC20A1Q8WUM9 679 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 CPA5Q8WXQ8 436 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 CLDN23Q96B33 292 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 IER2Q9BTL4 223 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 CHRDQ9H2X0 955 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 FAM204AQ9H8W3 233 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 ARHGEF4Q9NR80 690 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 SEMA4GQ9NTN9 838 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 DNAJC17Q9NVM6 304 aaKnown RBP8.1□□□□□ -1.11
SMG6-211ENST00000572369 PLK2Q9NYY3 685 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 COX16Q9P0S2 106 aa8.1□□□□□ -1.11
SMG6-211ENST00000572369 IFNKQ9P0W0 207 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms