RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 LAYNQ6UX15 382 aa11.89□□□□□ -0.51
CHMP6-202ENST00000571457 SCARA5Q6ZMJ2 495 aa11.89□□□□□ -0.51
CHMP6-202ENST00000571457 CACTIN-AS1Q8N1I8 211 aa11.89□□□□□ -0.51
CHMP6-202ENST00000571457 CPXM2Q8N436 756 aa11.89□□□□□ -0.51
CHMP6-202ENST00000571457 RBBP8NLQ8NC74 664 aaPredicted RBP11.89□□□□□ -0.51
CHMP6-202ENST00000571457 DDI1Q8WTU0 396 aa11.89□□□□□ -0.51
CHMP6-202ENST00000571457 SORCS1Q8WY21 1168 aa11.89□□□□□ -0.51
CHMP6-202ENST00000571457 ZNF516Q92618 1163 aa11.89□□□□□ -0.51
CHMP6-202ENST00000571457 GOLGA1Q92805 767 aa11.89□□□□□ -0.51
CHMP6-202ENST00000571457 P2RY11Q96G91 374 aa11.89□□□□□ -0.51
CHMP6-202ENST00000571457 CLMPQ9H6B4 373 aa11.89□□□□□ -0.51
CHMP6-202ENST00000571457 NMUR1Q9HB89 426 aa11.89□□□□□ -0.51
CHMP6-202ENST00000571457 CLIC5Q9NZA1 410 aa11.89□□□□□ -0.51
CHMP6-202ENST00000571457 NUDT5Q9UKK9 219 aa11.89□□□□□ -0.51
CHMP6-202ENST00000571457 SMC3Q9UQE7 1217 aa11.89□□□□□ -0.51
CHMP6-202ENST00000571457 STX6O43752 255 aa11.88□□□□□ -0.51
CHMP6-202ENST00000571457 BRINP1O60477 761 aa11.88□□□□□ -0.51
CHMP6-202ENST00000571457 CORO1AP31146 461 aaKnown RBP11.88□□□□□ -0.51
CHMP6-202ENST00000571457 HOXD13P35453 343 aa11.88□□□□□ -0.51
CHMP6-202ENST00000571457 ARRB1P49407 418 aaPredicted RBP11.88□□□□□ -0.51
CHMP6-202ENST00000571457 ACADVLP49748 655 aa11.88□□□□□ -0.51
CHMP6-202ENST00000571457 NDST1P52848 882 aa11.88□□□□□ -0.51
CHMP6-202ENST00000571457 UCNP55089 124 aa11.88□□□□□ -0.51
CHMP6-202ENST00000571457 RHDQ02161 417 aa11.88□□□□□ -0.51
CHMP6-202ENST00000571457 CCDC173Q0VFZ6 552 aa11.88□□□□□ -0.51
CHMP6-202ENST00000571457 NCOA4Q13772 614 aa11.88□□□□□ -0.51
CHMP6-202ENST00000571457 KCNT1Q5JUK3 1230 aa11.88□□□□□ -0.51
CHMP6-202ENST00000571457 FBXL19Q6PCT2 694 aa11.88□□□□□ -0.51
CHMP6-202ENST00000571457 GPRIN1Q7Z2K8 1008 aa11.88□□□□□ -0.51
CHMP6-202ENST00000571457 CCDC186Q7Z3E2 898 aa11.88□□□□□ -0.51
CHMP6-202ENST00000571457 GATAD2AQ86YP4 633 aa11.88□□□□□ -0.51
CHMP6-202ENST00000571457 ZNF507Q8TCN5 953 aa11.88□□□□□ -0.51
CHMP6-202ENST00000571457 WFIKKN2Q8TEU8 576 aa11.88□□□□□ -0.51
CHMP6-202ENST00000571457 TMX3Q96JJ7 454 aa11.88□□□□□ -0.51
CHMP6-202ENST00000571457 LGMNQ99538 433 aa11.88□□□□□ -0.51
CHMP6-202ENST00000571457 HNRNPABQ99729 332 aaKnown RBP11.88□□□□□ -0.51
CHMP6-202ENST00000571457 DNAI2Q9GZS0 605 aa11.88□□□□□ -0.51
CHMP6-202ENST00000571457 TMEM245Q9H330 911 aa11.88□□□□□ -0.51
CHMP6-202ENST00000571457 FAM49BQ9NUQ9 324 aa11.88□□□□□ -0.51
CHMP6-202ENST00000571457 CGNQ9P2M7 1197 aaKnown RBP11.88□□□□□ -0.51
CHMP6-202ENST00000571457 FBXO2Q9UK22 296 aaPredicted RBP11.88□□□□□ -0.51
CHMP6-202ENST00000571457 STRIP2Q9ULQ0 834 aa11.88□□□□□ -0.51
CHMP6-202ENST00000571457 NCKAP1Q9Y2A7 1128 aa11.88□□□□□ -0.51
CHMP6-202ENST00000571457 UBE4BO95155 1302 aa11.87□□□□□ -0.51
CHMP6-202ENST00000571457 ADORA2BP29275 332 aa11.87□□□□□ -0.51
CHMP6-202ENST00000571457 KIF11P52732 1056 aa11.87□□□□□ -0.51
CHMP6-202ENST00000571457 RPS14P62263 151 aaKnown RBP11.87□□□□□ -0.51
CHMP6-202ENST00000571457 DNAJC3Q13217 504 aa11.87□□□□□ -0.51
CHMP6-202ENST00000571457 TBC1D25Q3MII6 688 aa11.87□□□□□ -0.51
CHMP6-202ENST00000571457 BROXQ5VW32 411 aa11.87□□□□□ -0.51
CHMP6-202ENST00000571457 TMEM215Q68D42 235 aa11.87□□□□□ -0.51
CHMP6-202ENST00000571457 KIAA0895LQ68EN5 471 aa11.87□□□□□ -0.51
CHMP6-202ENST00000571457 PCSK4Q6UW60 755 aa11.87□□□□□ -0.51
CHMP6-202ENST00000571457 CLEC20AQ6ZU45 233 aa11.87□□□□□ -0.51
CHMP6-202ENST00000571457 USP30Q70CQ3 517 aa11.87□□□□□ -0.51
CHMP6-202ENST00000571457 DENND1CQ8IV53 801 aa11.87□□□□□ -0.51
CHMP6-202ENST00000571457 SPACA3Q8IXA5 215 aa11.87□□□□□ -0.51
CHMP6-202ENST00000571457 EID2Q8N6I1 236 aa11.87□□□□□ -0.51
CHMP6-202ENST00000571457 C12orf29Q8N999 325 aa11.87□□□□□ -0.51
CHMP6-202ENST00000571457 SAP25Q8TEE9 199 aa11.87□□□□□ -0.51
CHMP6-202ENST00000571457 TSC1Q92574 1164 aa11.87□□□□□ -0.51
CHMP6-202ENST00000571457 JAKMIP2Q96AA8 810 aa11.87□□□□□ -0.51
CHMP6-202ENST00000571457 CLIC6Q96NY7 704 aa11.87□□□□□ -0.51
CHMP6-202ENST00000571457 PANK2Q9BZ23 570 aa11.87□□□□□ -0.51
CHMP6-202ENST00000571457 TNMDQ9H2S6 317 aa11.87□□□□□ -0.51
CHMP6-202ENST00000571457 GDF3Q9NR23 364 aa11.87□□□□□ -0.51
CHMP6-202ENST00000571457 SUN2Q9UH99 717 aa11.87□□□□□ -0.51
CHMP6-202ENST00000571457 RASAL2Q9UJF2 1139 aa11.87□□□□□ -0.51
CHMP6-202ENST00000571457 AGO1Q9UL18 857 aaKnown RBP11.87□□□□□ -0.51
CHMP6-202ENST00000571457 SCML1Q9UN30 329 aa11.87□□□□□ -0.51
CHMP6-202ENST00000571457 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.87□□□□□ -0.51
CHMP6-202ENST00000571457 ARID1BQ8NFD5 2236 aaPredicted RBP11.87□□□□□ -0.51
CHMP6-202ENST00000571457 MYLKQ15746 1914 aa11.86□□□□□ -0.51
CHMP6-202ENST00000571457 A0A1W2PPC4 97 aa11.86□□□□□ -0.51
CHMP6-202ENST00000571457 HHLA1C9JL84 531 aa11.86□□□□□ -0.51
CHMP6-202ENST00000571457 CBX4O00257 560 aa11.86□□□□□ -0.51
CHMP6-202ENST00000571457 CLIC2O15247 247 aa11.86□□□□□ -0.51
CHMP6-202ENST00000571457 TGFB1I1O43294 461 aa11.86□□□□□ -0.51
CHMP6-202ENST00000571457 EXOC3O60645 756 aa11.86□□□□□ -0.51
CHMP6-202ENST00000571457 RPN1P04843 607 aaKnown RBP11.86□□□□□ -0.51
CHMP6-202ENST00000571457 IGHV4-34P06331 123 aa11.86□□□□□ -0.51
CHMP6-202ENST00000571457 ATP5BP06576 529 aaKnown RBP11.86□□□□□ -0.51
CHMP6-202ENST00000571457 HMBSP08397 361 aa11.86□□□□□ -0.51
CHMP6-202ENST00000571457 GLDCP23378 1020 aa11.86□□□□□ -0.51
CHMP6-202ENST00000571457 CLDN6P56747 220 aa11.86□□□□□ -0.51
CHMP6-202ENST00000571457 TMPRSS3P57727 454 aa11.86□□□□□ -0.51
CHMP6-202ENST00000571457 ZNF445P59923 1031 aa11.86□□□□□ -0.51
CHMP6-202ENST00000571457 AMPD3Q01432 767 aa11.86□□□□□ -0.51
CHMP6-202ENST00000571457 KCNC4Q03721 635 aa11.86□□□□□ -0.51
CHMP6-202ENST00000571457 EFEMP1Q12805 493 aa11.86□□□□□ -0.51
CHMP6-202ENST00000571457 KCNH2Q12809 1159 aa11.86□□□□□ -0.51
CHMP6-202ENST00000571457 RABEP1Q15276 862 aa11.86□□□□□ -0.51
CHMP6-202ENST00000571457 SGSM1Q2NKQ1 1148 aa11.86□□□□□ -0.51
CHMP6-202ENST00000571457 MPPE1Q53F39 396 aa11.86□□□□□ -0.51
CHMP6-202ENST00000571457 FAM26FQ5R3K3 315 aa11.86□□□□□ -0.51
CHMP6-202ENST00000571457 ZNF776Q68DI1 518 aaPredicted RBP11.86□□□□□ -0.51
CHMP6-202ENST00000571457 RSRC2Q7L4I2 434 aaKnown RBP11.86□□□□□ -0.51
CHMP6-202ENST00000571457 EPM2AIP1Q7L775 607 aaPredicted RBP11.86□□□□□ -0.51
CHMP6-202ENST00000571457 SCD5Q86SK9 330 aa11.86□□□□□ -0.51
CHMP6-202ENST00000571457 ARHGAP18Q8N392 663 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms