RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 PNMA6AP0CW24 399 aaPredicted RBP8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 CHRNB2P17787 502 aa8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 HOXD9P28356 352 aaPredicted RBP8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 KRT9P35527 623 aa8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 SOX5P35711 763 aa8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 USP8P40818 1118 aa8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 DGKGP49619 791 aa8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 KLK7P49862 253 aa8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 GSCP56915 257 aaPredicted RBP8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 TBX4P57082 545 aa8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 SLC6A3Q01959 620 aa8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 TAF5Q15542 800 aa8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 ANO6Q4KMQ2 910 aa8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 C2orf27AQ580R0 203 aa8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 EOGTQ5NDL2 527 aa8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 FKBP15Q5T1M5 1219 aa8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 ARTNQ5T4W7 220 aa8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 LAIR1Q6GTX8 287 aa8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 GRAMD4Q6IC98 578 aa8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 CAVIN1Q6NZI2 390 aaKnown RBP8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 TOGARAM2Q6ZUX3 1019 aa8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 TRMT11Q7Z4G4 463 aaKnown RBP8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 NOP9Q86U38 636 aaKnown RBP8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 TMEM35BQ8NCS4 154 aa8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 RUBCNQ92622 972 aa8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 GOLGA1Q92805 767 aa8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 PGAP3Q96FM1 320 aaPredicted RBP8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 SERPINB11Q96P15 392 aa8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 RTN4Q9NQC3 1192 aaKnown RBP8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 ST7Q9NRC1 585 aa8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 DNAJC17Q9NVM6 304 aaKnown RBP8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 POLR3BQ9NW08 1133 aaPredicted RBP8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 RRN3Q9NYV6 651 aa8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 THAP10Q9P2Z0 257 aaPredicted RBP8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 CLEC4EQ9ULY5 219 aa8.52□□□□□ -1.05
HDGFL3-205ENST00000568129 DMXL1Q9Y485 3027 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 A0A1W2PQF6 199 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 AXIN1O15169 862 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 CAVIN2O95810 425 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 TRUB2O95900 331 aaKnown RBP8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 TPM2P07951 284 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 HMBSP08397 361 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 UNGP13051 313 aaPredicted RBP8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 ATP1A3P13637 1013 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 PTMSP20962 102 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 NTSR1P30989 418 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 SLC6A4P31645 630 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 NOS2P35228 1153 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 TIE1P35590 1138 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 MATKP42679 507 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 SLC11A2P49281 568 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 POLR2FP61218 127 aaKnown RBP8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 NOMO3P69849 1222 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 FMO1Q01740 532 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 CDR2Q01850 454 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 MTA1Q13330 715 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 RAPGEF1Q13905 1077 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 NR1I3Q14994 352 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 EIF4HQ15056 248 aaKnown RBP8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 E2F5Q15329 346 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 SYCP1Q15431 976 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 GEN1Q17RS7 908 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 C5orf22Q49AR2 442 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 TMEM215Q68D42 235 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 NADSYN1Q6IA69 706 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 FAM183BPQ6ZVS7 135 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 TAC4Q86UU9 113 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 ALLCQ8N6M5 410 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 AOPEPQ8N6M6 819 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 GPR161Q8N6U8 529 aaKnown RBP8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 ZNF513Q8N8E2 541 aaPredicted RBP8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 TXNDC5Q8NBS9 432 aaKnown RBP8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 ANKRD20A12PQ8NF67 263 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 FIBINQ8TAL6 211 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 TMA16Q96EY4 203 aaKnown RBP8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 NOX5Q96PH1 765 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 NPY6RQ99463 290 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 PRMT1Q99873 361 aaKnown RBP8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 SYT11Q9BT88 431 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 TMEM59LQ9UK28 342 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 MYO6Q9UM54 1294 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 SMG5Q9UPR3 1016 aaKnown RBP8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 CACNA1EQ15878 2313 aa8.51□□□□□ -1.05
HDGFL3-205ENST00000568129 NUMA1Q14980 2115 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 SPTBN4Q9H254 2564 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 A0A1B0GTH6 734 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 A0A1W2PQC6 194 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 TEX33O43247 280 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 DAB1O75553 588 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 ENDOD1O94919 500 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 KLF8O95600 359 aaPredicted RBP8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 CYBBP04839 570 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 RETP07949 1114 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 MMEP08473 750 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 SLC2A3P11169 496 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 CDK11BP21127 795 aaKnown RBP8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 MMP8P22894 467 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 HLA-FP30511 346 aa8.5□□□□□ -1.05
HDGFL3-205ENST00000568129 STAT1P42224 750 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms