RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 GPR179Q6PRD1 2367 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 PI4KAP42356 2102 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.99□□□□□ -1.61
CLK3-219ENST00000567805 A0A1W2PQF6 199 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 TCRBV21S2A2A0A5A6 115 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 BCLAF3A2AJT9 711 aaKnown RBP4.99□□□□□ -1.61
CLK3-219ENST00000567805 PRRT4C9JH25 899 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 PIK3R2O00459 728 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 SLC30A4O14863 429 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 ZBTB24O43167 697 aaPredicted RBP4.99□□□□□ -1.61
CLK3-219ENST00000567805 IRAK2O43187 625 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 SART1O43290 800 aaKnown RBP4.99□□□□□ -1.61
CLK3-219ENST00000567805 TIMM44O43615 452 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 ZNF217O75362 1048 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 LETM1O95202 739 aaPredicted RBP4.99□□□□□ -1.61
CLK3-219ENST00000567805 CAVIN2O95810 425 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 CALCAP01258 141 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 IGLV3-27P01718 113 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 NCAM1P13591 858 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 GABRG2P18507 467 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 BCKDHBP21953 392 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 PON1P27169 355 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 ERCC5P28715 1186 aaPredicted RBP4.99□□□□□ -1.61
CLK3-219ENST00000567805 GNA15P30679 374 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 P2RY2P41231 377 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 DPP6P42658 865 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 GPD2P43304 727 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 ACADSBP45954 432 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 MTIF2P46199 727 aaKnown RBP4.99□□□□□ -1.61
CLK3-219ENST00000567805 RPL34P49207 117 aaKnown RBP4.99□□□□□ -1.61
CLK3-219ENST00000567805 SLC11A2P49281 568 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 RGS7P49802 495 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 LIMK1P53667 647 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 CREB5Q02930 508 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 RING1Q06587 406 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 NNTQ13423 1086 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 EIF4HQ15056 248 aaKnown RBP4.99□□□□□ -1.61
CLK3-219ENST00000567805 SF3A2Q15428 464 aaKnown RBP4.99□□□□□ -1.61
CLK3-219ENST00000567805 CCDC6Q16204 474 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 MAN2A1Q16706 1144 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 GEN1Q17RS7 908 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 MAP7D1Q3KQU3 841 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 DPCR1Q3MIW9 517 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 MPPE1Q53F39 396 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 CT47A1Q5JQC4 288 aaPredicted RBP4.99□□□□□ -1.61
CLK3-219ENST00000567805 ADGRF1Q5T601 910 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 EGFLAMQ63HQ2 1017 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 NUGGCQ68CJ6 796 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 CLEC17AQ6ZS10 378 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 BEND5Q7L4P6 421 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 LPCAT2Q7L5N7 544 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 ANKS1BQ7Z6G8 1248 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 IRF2BP1Q8IU81 584 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 CREBRFQ8IUR6 639 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 FAM114A1Q8IWE2 563 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 UNC45BQ8IWX7 931 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 PGBD3Q8N328 593 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 IPO4Q8TEX9 1081 aaKnown RBP4.99□□□□□ -1.61
CLK3-219ENST00000567805 CLEC4CQ8WTT0 213 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 DDI1Q8WTU0 396 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 STK32AQ8WU08 396 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 UCMAQ8WVF2 138 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 ZNF606Q8WXB4 792 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 DDX1Q92499 740 aaKnown RBP4.99□□□□□ -1.61
CLK3-219ENST00000567805 EDEM1Q92611 657 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 AZIN2Q96A70 460 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 P2RY11Q96G91 374 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 PIWIL1Q96J94 861 aaKnown RBP4.99□□□□□ -1.61
CLK3-219ENST00000567805 MED15Q96RN5 788 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 CRACR2AQ9BSW2 395 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 MIS12Q9H081 205 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 NUP62CLQ9H1M0 184 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 THAP9Q9H5L6 903 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 CD248Q9HCU0 757 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 ST7Q9NRC1 585 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 VPS45Q9NRW7 570 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 PLK2Q9NYY3 685 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 STOML2Q9UJZ1 356 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 HCN2Q9UL51 889 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 INVSQ9Y283 1065 aa4.99□□□□□ -1.61
CLK3-219ENST00000567805 CEP250Q9BV73 2442 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 TP53BP1Q12888 1972 aaPredicted RBP4.98□□□□□ -1.61
CLK3-219ENST00000567805 SPEGQ15772 3267 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 DCDC2BA2VCK2 349 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 GOLGA8CPA6NN73 597 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 BECN2A8MW95 431 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 E5RJQ4 531 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 CAPN9O14815 690 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 KHNYNO15037 678 aaKnown RBP4.98□□□□□ -1.61
CLK3-219ENST00000567805 AP5Z1O43299 807 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 MSI1O43347 362 aaKnown RBP4.98□□□□□ -1.61
CLK3-219ENST00000567805 THAP12O43422 761 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 GDF9O60383 454 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 FYNP06241 537 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 NDUFV2P19404 249 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 SLC9A1P19634 815 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 HOXD9P28356 352 aaPredicted RBP4.98□□□□□ -1.61
CLK3-219ENST00000567805 HOXD12P35452 270 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 USP8P40818 1118 aa4.98□□□□□ -1.61
CLK3-219ENST00000567805 WASP42768 502 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms