RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 SNCAIPQ9Y6H5 919 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 COMMD3-BMI1R4GMX3 469 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 PEAK1Q9H792 1746 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 A0A0A6YYK5 440 aaPredicted RBP6.39□□□□□ -1.39
CDH13-209ENST00000567109 PTPN3P26045 913 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 BNC1Q01954 994 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 BIKQ13323 160 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 PDK1Q15118 436 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 CYTH1Q15438 398 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 SGSM1Q2NKQ1 1148 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 SETMARQ53H47 684 aaPredicted RBP6.39□□□□□ -1.39
CDH13-209ENST00000567109 ANKMY2Q8IV38 441 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 MIER2Q8N344 545 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 B3GALNT2Q8NCR0 500 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 ADAMTS1Q9UHI8 967 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 VPS28Q9UK41 221 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 EIF3LQ9Y262 564 aaKnown RBP6.39□□□□□ -1.39
CDH13-209ENST00000567109 PMPCBO75439 489 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 SOAT2O75908 522 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 EYA4O95677 639 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 POLBP06746 335 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 AKR1A1P14550 325 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 PCSK2P16519 638 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 ACADVLP49748 655 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 TMED10P49755 219 aaKnown RBP6.39□□□□□ -1.39
CDH13-209ENST00000567109 DRG2P55039 364 aaKnown RBP6.39□□□□□ -1.39
CDH13-209ENST00000567109 DEFA1P59665 94 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 DEFA3P59666 94 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 SRSF11Q05519 484 aaKnown RBP6.39□□□□□ -1.39
CDH13-209ENST00000567109 XRCC4Q13426 336 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 CBFBQ13951 182 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 SLC18A3Q16572 532 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 LRRC8DQ7L1W4 858 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 ABRAQ8N0Z2 381 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 CYP4Z2PQ8N1L4 340 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 NKX2-3Q8TAU0 364 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 RAD54LQ92698 747 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 CLIP3Q96DZ5 547 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 PAGE5Q96GU1 130 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 BTBD9Q96Q07 612 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 ASCC2Q9H1I8 757 aaPredicted RBP6.39□□□□□ -1.39
CDH13-209ENST00000567109 KCNN2Q9H2S1 579 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 SLC40A1Q9NP59 571 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 RBM7Q9Y580 266 aaKnown RBP6.39□□□□□ -1.39
CDH13-209ENST00000567109 NHSL1Q5SYE7 1610 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 STX7O15400 261 aaKnown RBP6.39□□□□□ -1.39
CDH13-209ENST00000567109 RTN2O75298 545 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 DGAT1O75907 488 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 GEMIN4P57678 1058 aaKnown RBP6.39□□□□□ -1.39
CDH13-209ENST00000567109 KCNK10P57789 538 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 BTG3Q14201 252 aaPredicted RBP6.39□□□□□ -1.39
CDH13-209ENST00000567109 EFHC1Q5JVL4 640 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 NT5DC1Q5TFE4 455 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 C16orf89Q6UX73 402 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 P3H2Q8IVL5 708 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 PGM2Q96G03 612 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 FRMD6Q96NE9 622 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 BBS4Q96RK4 519 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 RSPH9Q9H1X1 276 aaPredicted RBP6.39□□□□□ -1.39
CDH13-209ENST00000567109 MLXIPLQ9NP71 852 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 CCDC177Q9NQR7 707 aaPredicted RBP6.39□□□□□ -1.39
CDH13-209ENST00000567109 A0A088AWK7 358 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 E2F8A0AVK6 867 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 TBKBP1A7MCY6 615 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 POMCP01189 267 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 THP07101 528 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 ZNF10P21506 573 aaPredicted RBP6.39□□□□□ -1.39
CDH13-209ENST00000567109 PSMC6P62333 389 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 FAM83EQ2M2I3 478 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 CTXN3Q4LDR2 81 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 MARK2Q7KZI7 788 aaKnown RBP6.39□□□□□ -1.39
CDH13-209ENST00000567109 ARHGAP22Q7Z5H3 698 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 CLEC10AQ8IUN9 316 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 RCOR2Q8IZ40 523 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 CENPLQ8N0S6 344 aaPredicted RBP6.39□□□□□ -1.39
CDH13-209ENST00000567109 WDR36Q8NI36 951 aaKnown RBP6.39□□□□□ -1.39
CDH13-209ENST00000567109 SPATC1LQ9H0A9 340 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 PABPC3Q9H361 631 aaKnown RBP6.39□□□□□ -1.39
CDH13-209ENST00000567109 ELL3Q9HB65 397 aaPredicted RBP6.39□□□□□ -1.39
CDH13-209ENST00000567109 ANKEF1Q9NU02 776 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 SPG21Q9NZD8 308 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 MARK1Q9P0L2 795 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 C15orf41Q9Y2V0 281 aa6.39□□□□□ -1.39
CDH13-209ENST00000567109 IGSF9BQ9UPX0 1349 aa6.38□□□□□ -1.39
CDH13-209ENST00000567109 TBC1D3BA6NDS4 549 aa6.38□□□□□ -1.39
CDH13-209ENST00000567109 B2RBV5 119 aa6.38□□□□□ -1.39
CDH13-209ENST00000567109 MTRF1O75570 445 aaKnown RBP6.38□□□□□ -1.39
CDH13-209ENST00000567109 GRK2P25098 689 aa6.38□□□□□ -1.39
CDH13-209ENST00000567109 MAGOHP61326 146 aaKnown RBP6.38□□□□□ -1.39
CDH13-209ENST00000567109 NFIL3Q16649 462 aa6.38□□□□□ -1.39
CDH13-209ENST00000567109 ZNF484Q5JVG2 852 aa6.38□□□□□ -1.39
CDH13-209ENST00000567109 FAAH2Q6GMR7 532 aa6.38□□□□□ -1.39
CDH13-209ENST00000567109 KIAA1324Q6UXG2 1013 aaKnown RBP6.38□□□□□ -1.39
CDH13-209ENST00000567109 ZFPM1Q8IX07 1006 aa6.38□□□□□ -1.39
CDH13-209ENST00000567109 IZUMO1Q8IYV9 350 aa6.38□□□□□ -1.39
CDH13-209ENST00000567109 MCOLN3Q8TDD5 553 aa6.38□□□□□ -1.39
CDH13-209ENST00000567109 RERGQ96A58 199 aaPredicted RBP6.38□□□□□ -1.39
CDH13-209ENST00000567109 ZCCHC2Q9C0B9 1178 aaKnown RBP6.38□□□□□ -1.39
CDH13-209ENST00000567109 GOLPH3Q9H4A6 298 aa6.38□□□□□ -1.39
CDH13-209ENST00000567109 RGS18Q9NS28 235 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms