RNA–Protein interactions for RNA: ENST00000566482.5

CNEP1R1-208, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-208ENST00000566482 ATG2BQ96BY7 2078 aa13.4□□□□□ -0.27
CNEP1R1-208ENST00000566482 SYNJ2BP-COX16A0A087WUM0 186 aa13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 GOLGA6L7A0A1B0GV03 622 aa13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 PROB1E7EW31 1015 aa13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 GOLGA8SH3BPF8 625 aa13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 MOCS2O96007 188 aaPredicted RBP13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 APOEP02649 317 aa13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 CISD3P0C7P0 127 aa13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 SLC6A4P31645 630 aa13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 TIE1P35590 1138 aa13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 KIR2DL1P43626 348 aaPredicted RBP13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 SGSHP51688 502 aa13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 NRLP54845 237 aa13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 ZNF445P59923 1031 aa13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 RNASE9P60153 205 aaKnown RBP13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 MRPS21P82921 87 aaKnown RBP13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 DMWDQ09019 674 aa13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 EIF4EBP2Q13542 120 aaPredicted RBP13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 CLEC16AQ2KHT3 1053 aa13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 MPPE1Q53F39 396 aa13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 FAM133BQ5BKY9 247 aaKnown RBP13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 ZC3H12AQ5D1E8 599 aaKnown RBP13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 FAM102AQ5T9C2 384 aaPredicted RBP13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 NADSYN1Q6IA69 706 aa13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 RFWD3Q6PCD5 774 aa13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 MMS22LQ6ZRQ5 1243 aa13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 NUDT18Q6ZVK8 323 aa13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 SYT13Q7L8C5 426 aa13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 IRF2BP2Q7Z5L9 587 aa13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 CCDC33Q8N5R6 958 aa13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 ZBTB44Q8NCP5 570 aa13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 SLC30A5Q8TAD4 765 aa13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 AZIN2Q96A70 460 aa13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 AGPAT1Q99943 283 aa13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 FAM126AQ9BYI3 521 aaPredicted RBP13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 TTYH3Q9C0H2 523 aa13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 DDIT4Q9NX09 232 aa13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 COX16Q9P0S2 106 aa13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 IFNKQ9P0W0 207 aa13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 XPO7Q9UIA9 1087 aaKnown RBP13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 SLC8A2Q9UPR5 921 aa13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 PCDHGA2Q9Y5H1 932 aa13.39□□□□□ -0.27
CNEP1R1-208ENST00000566482 LRRC53A6NM62 1247 aa13.38□□□□□ -0.27
CNEP1R1-208ENST00000566482 KLF8O95600 359 aaPredicted RBP13.38□□□□□ -0.27
CNEP1R1-208ENST00000566482 CCDC172P0C7W6 258 aa13.38□□□□□ -0.27
CNEP1R1-208ENST00000566482 UNGP13051 313 aaPredicted RBP13.38□□□□□ -0.27
CNEP1R1-208ENST00000566482 MMP8P22894 467 aa13.38□□□□□ -0.27
CNEP1R1-208ENST00000566482 HOXD9P28356 352 aaPredicted RBP13.38□□□□□ -0.27
CNEP1R1-208ENST00000566482 GBP1P32455 592 aa13.38□□□□□ -0.27
CNEP1R1-208ENST00000566482 NOS2P35228 1153 aa13.38□□□□□ -0.27
CNEP1R1-208ENST00000566482 PBX1P40424 430 aa13.38□□□□□ -0.27
CNEP1R1-208ENST00000566482 MATKP42679 507 aa13.38□□□□□ -0.27
CNEP1R1-208ENST00000566482 FNTBP49356 437 aa13.38□□□□□ -0.27
CNEP1R1-208ENST00000566482 DMC1Q14565 340 aa13.38□□□□□ -0.27
CNEP1R1-208ENST00000566482 ASIC2Q16515 512 aa13.38□□□□□ -0.27
CNEP1R1-208ENST00000566482 PIK3R6Q5UE93 754 aa13.38□□□□□ -0.27
CNEP1R1-208ENST00000566482 OTUD1Q5VV17 481 aaPredicted RBP13.38□□□□□ -0.27
CNEP1R1-208ENST00000566482 HEATR6Q6AI08 1181 aaKnown RBP13.38□□□□□ -0.27
CNEP1R1-208ENST00000566482 ALLCQ8N6M5 410 aa13.38□□□□□ -0.27
CNEP1R1-208ENST00000566482 IL17RCQ8NAC3 791 aa13.38□□□□□ -0.27
CNEP1R1-208ENST00000566482 ATRIPQ8WXE1 791 aa13.38□□□□□ -0.27
CNEP1R1-208ENST00000566482 TMA16Q96EY4 203 aaKnown RBP13.38□□□□□ -0.27
CNEP1R1-208ENST00000566482 HHIPQ96QV1 700 aa13.38□□□□□ -0.27
CNEP1R1-208ENST00000566482 DDX50Q9BQ39 737 aaKnown RBP13.38□□□□□ -0.27
CNEP1R1-208ENST00000566482 C11orf70Q9BRQ4 267 aa13.38□□□□□ -0.27
CNEP1R1-208ENST00000566482 ADAM33Q9BZ11 813 aa13.38□□□□□ -0.27
CNEP1R1-208ENST00000566482 NUCKS1Q9H1E3 243 aaKnown RBP13.38□□□□□ -0.27
CNEP1R1-208ENST00000566482 ZDHHC4Q9NPG8 344 aa13.38□□□□□ -0.27
CNEP1R1-208ENST00000566482 SEPT11Q9NVA2 429 aaKnown RBP13.38□□□□□ -0.27
CNEP1R1-208ENST00000566482 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.38□□□□□ -0.27
CNEP1R1-208ENST00000566482 CLEC4EQ9ULY5 219 aa13.38□□□□□ -0.27
CNEP1R1-208ENST00000566482 MMP17Q9ULZ9 603 aa13.38□□□□□ -0.27
CNEP1R1-208ENST00000566482 SLC27A6Q9Y2P4 619 aa13.38□□□□□ -0.27
CNEP1R1-208ENST00000566482 VPS13AQ96RL7 3174 aa13.38□□□□□ -0.27
CNEP1R1-208ENST00000566482 FANCMQ8IYD8 2048 aa13.37□□□□□ -0.27
CNEP1R1-208ENST00000566482 PRRT4C9JH25 899 aa13.37□□□□□ -0.27
CNEP1R1-208ENST00000566482 M0QYT0 321 aa13.37□□□□□ -0.27
CNEP1R1-208ENST00000566482 TBL1XO60907 577 aa13.37□□□□□ -0.27
CNEP1R1-208ENST00000566482 LILRB5O75023 590 aa13.37□□□□□ -0.27
CNEP1R1-208ENST00000566482 TFE3P19532 575 aaPredicted RBP13.37□□□□□ -0.27
CNEP1R1-208ENST00000566482 HOXA6P31267 233 aa13.37□□□□□ -0.27
CNEP1R1-208ENST00000566482 CCR1P32246 355 aa13.37□□□□□ -0.27
CNEP1R1-208ENST00000566482 NSFP46459 744 aaKnown RBP13.37□□□□□ -0.27
CNEP1R1-208ENST00000566482 PXNP49023 591 aaPredicted RBP13.37□□□□□ -0.27
CNEP1R1-208ENST00000566482 MRE11P49959 708 aa13.37□□□□□ -0.27
CNEP1R1-208ENST00000566482 CENPCQ03188 943 aa13.37□□□□□ -0.27
CNEP1R1-208ENST00000566482 PTP4A2Q12974 167 aa13.37□□□□□ -0.27
CNEP1R1-208ENST00000566482 NME3Q13232 169 aa13.37□□□□□ -0.27
CNEP1R1-208ENST00000566482 HSF5Q4G112 596 aaPredicted RBP13.37□□□□□ -0.27
CNEP1R1-208ENST00000566482 EGFLAMQ63HQ2 1017 aa13.37□□□□□ -0.27
CNEP1R1-208ENST00000566482 E4F1Q66K89 784 aaPredicted RBP13.37□□□□□ -0.27
CNEP1R1-208ENST00000566482 TRNP1Q6NT89 227 aa13.37□□□□□ -0.27
CNEP1R1-208ENST00000566482 PHLDB2Q86SQ0 1253 aa13.37□□□□□ -0.27
CNEP1R1-208ENST00000566482 ZNF513Q8N8E2 541 aaPredicted RBP13.37□□□□□ -0.27
CNEP1R1-208ENST00000566482 ATP6V0D2Q8N8Y2 350 aa13.37□□□□□ -0.27
CNEP1R1-208ENST00000566482 TXNDC5Q8NBS9 432 aaKnown RBP13.37□□□□□ -0.27
CNEP1R1-208ENST00000566482 RNF34Q969K3 372 aa13.37□□□□□ -0.27
CNEP1R1-208ENST00000566482 MYEOVQ96EZ4 313 aa13.37□□□□□ -0.27
CNEP1R1-208ENST00000566482 BTN2A3PQ96KV6 586 aa13.37□□□□□ -0.27
CNEP1R1-208ENST00000566482 PRICKLE1Q96MT3 831 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms