RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 NUP85Q9BW27 656 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 PLA2G2FQ9BZM2 168 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 LACRTQ9GZZ8 138 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 NACA2Q9H009 215 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 SMG9Q9H0W8 520 aaKnown RBP13.13□□□□□ -0.31
SF3B3-206ENST00000565990 KCNK12Q9HB15 430 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.13□□□□□ -0.31
SF3B3-206ENST00000565990 IGSF9Q9P2J2 1179 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 LIMD1Q9UGP4 676 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 LCMT1Q9UIC8 334 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 STOML2Q9UJZ1 356 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 UNC80Q8N2C7 3258 aa13.13□□□□□ -0.31
SF3B3-206ENST00000565990 SLC12A8A0AV02 714 aa13.12□□□□□ -0.31
SF3B3-206ENST00000565990 CTAGE15A4D2H0 777 aa13.12□□□□□ -0.31
SF3B3-206ENST00000565990 HEPACAM2A8MVW5 462 aa13.12□□□□□ -0.31
SF3B3-206ENST00000565990 IRAK2O43187 625 aa13.12□□□□□ -0.31
SF3B3-206ENST00000565990 KRT86O43790 486 aa13.12□□□□□ -0.31
SF3B3-206ENST00000565990 KLKB1P03952 638 aa13.12□□□□□ -0.31
SF3B3-206ENST00000565990 CTAGE8P0CG41 777 aa13.12□□□□□ -0.31
SF3B3-206ENST00000565990 FCHO2Q0JRZ9 810 aa13.12□□□□□ -0.31
SF3B3-206ENST00000565990 PPP2R5DQ14738 602 aa13.12□□□□□ -0.31
SF3B3-206ENST00000565990 ZNF569Q5MCW4 686 aa13.12□□□□□ -0.31
SF3B3-206ENST00000565990 SH3PXD2AQ5TCZ1 1133 aa13.12□□□□□ -0.31
SF3B3-206ENST00000565990 WDR93Q6P2C0 686 aa13.12□□□□□ -0.31
SF3B3-206ENST00000565990 VITQ6UXI7 678 aa13.12□□□□□ -0.31
SF3B3-206ENST00000565990 Q6ZNB5 142 aa13.12□□□□□ -0.31
SF3B3-206ENST00000565990 ZNF771Q7L3S4 317 aaPredicted RBP13.12□□□□□ -0.31
SF3B3-206ENST00000565990 CTAGE6Q86UF2 777 aa13.12□□□□□ -0.31
SF3B3-206ENST00000565990 CTAGE4Q8IX94 777 aa13.12□□□□□ -0.31
SF3B3-206ENST00000565990 SLC44A3Q8N4M1 653 aa13.12□□□□□ -0.31
SF3B3-206ENST00000565990 ARFGAP1Q8N6T3 406 aa13.12□□□□□ -0.31
SF3B3-206ENST00000565990 NIPA2Q8N8Q9 360 aa13.12□□□□□ -0.31
SF3B3-206ENST00000565990 RIN3Q8TB24 985 aa13.12□□□□□ -0.31
SF3B3-206ENST00000565990 ADAM32Q8TC27 787 aa13.12□□□□□ -0.31
SF3B3-206ENST00000565990 BPIFB1Q8TDL5 484 aa13.12□□□□□ -0.31
SF3B3-206ENST00000565990 SH3RF2Q8TEC5 729 aa13.12□□□□□ -0.31
SF3B3-206ENST00000565990 RFFLQ8WZ73 363 aa13.12□□□□□ -0.31
SF3B3-206ENST00000565990 WBP2Q969T9 261 aa13.12□□□□□ -0.31
SF3B3-206ENST00000565990 PLD4Q96BZ4 506 aa13.12□□□□□ -0.31
SF3B3-206ENST00000565990 TBCBQ99426 244 aa13.12□□□□□ -0.31
SF3B3-206ENST00000565990 PARD6BQ9BYG5 372 aa13.12□□□□□ -0.31
SF3B3-206ENST00000565990 TRIM7Q9C029 511 aa13.12□□□□□ -0.31
SF3B3-206ENST00000565990 OSGEPQ9NPF4 335 aa13.12□□□□□ -0.31
SF3B3-206ENST00000565990 PIGVQ9NUD9 493 aa13.12□□□□□ -0.31
SF3B3-206ENST00000565990 ARHGEF38Q9NXL2 777 aa13.12□□□□□ -0.31
SF3B3-206ENST00000565990 IP6K2Q9UHH9 426 aa13.12□□□□□ -0.31
SF3B3-206ENST00000565990 RASAL2Q9UJF2 1139 aa13.12□□□□□ -0.31
SF3B3-206ENST00000565990 TFR2Q9UP52 801 aa13.12□□□□□ -0.31
SF3B3-206ENST00000565990 TARSL2A2RTX5 802 aaKnown RBP13.11□□□□□ -0.31
SF3B3-206ENST00000565990 MYO1FO00160 1098 aa13.11□□□□□ -0.31
SF3B3-206ENST00000565990 MAP2K7O14733 419 aa13.11□□□□□ -0.31
SF3B3-206ENST00000565990 MSI1O43347 362 aaKnown RBP13.11□□□□□ -0.31
SF3B3-206ENST00000565990 LATS1O95835 1130 aa13.11□□□□□ -0.31
SF3B3-206ENST00000565990 SLC2A3P11169 496 aa13.11□□□□□ -0.31
SF3B3-206ENST00000565990 PSMC3P17980 439 aa13.11□□□□□ -0.31
SF3B3-206ENST00000565990 HDAC4P56524 1084 aa13.11□□□□□ -0.31
SF3B3-206ENST00000565990 TBX4P57082 545 aa13.11□□□□□ -0.31
SF3B3-206ENST00000565990 AMPD2Q01433 879 aa13.11□□□□□ -0.31
SF3B3-206ENST00000565990 USP4Q13107 963 aa13.11□□□□□ -0.31
SF3B3-206ENST00000565990 PIGHQ14442 188 aaPredicted RBP13.11□□□□□ -0.31
SF3B3-206ENST00000565990 C15orf59Q2T9L4 293 aaPredicted RBP13.11□□□□□ -0.31
SF3B3-206ENST00000565990 RAB6CQ53S08 254 aa13.11□□□□□ -0.31
SF3B3-206ENST00000565990 NUGGCQ68CJ6 796 aa13.11□□□□□ -0.31
SF3B3-206ENST00000565990 HDXQ7Z353 690 aa13.11□□□□□ -0.31
SF3B3-206ENST00000565990 UNC45BQ8IWX7 931 aa13.11□□□□□ -0.31
SF3B3-206ENST00000565990 FAM217AQ8IXS0 508 aa13.11□□□□□ -0.31
SF3B3-206ENST00000565990 ADGRG2Q8IZP9 1017 aa13.11□□□□□ -0.31
SF3B3-206ENST00000565990 LRRN4CLQ8ND94 238 aa13.11□□□□□ -0.31
SF3B3-206ENST00000565990 ZNF564Q8TBZ8 553 aaPredicted RBP13.11□□□□□ -0.31
SF3B3-206ENST00000565990 NCAPGQ9BPX3 1015 aa13.11□□□□□ -0.31
SF3B3-206ENST00000565990 FAM83CQ9BQN1 747 aa13.11□□□□□ -0.31
SF3B3-206ENST00000565990 DESI2Q9BSY9 194 aa13.11□□□□□ -0.31
SF3B3-206ENST00000565990 DCLK3Q9C098 648 aa13.11□□□□□ -0.31
SF3B3-206ENST00000565990 RAB6CQ9H0N0 254 aa13.11□□□□□ -0.31
SF3B3-206ENST00000565990 DDIT4Q9NX09 232 aa13.11□□□□□ -0.31
SF3B3-206ENST00000565990 SMPD4Q9NXE4 827 aa13.11□□□□□ -0.31
SF3B3-206ENST00000565990 CTTNBP2NLQ9P2B4 639 aa13.11□□□□□ -0.31
SF3B3-206ENST00000565990 SALL4Q9UJQ4 1053 aa13.11□□□□□ -0.31
SF3B3-206ENST00000565990 ZNF510Q9Y2H8 683 aa13.11□□□□□ -0.31
SF3B3-206ENST00000565990 NUMBLQ9Y6R0 609 aa13.11□□□□□ -0.31
SF3B3-206ENST00000565990 DUSP10Q9Y6W6 482 aa13.11□□□□□ -0.31
SF3B3-206ENST00000565990 MYOFQ9NZM1 2061 aa13.11□□□□□ -0.31
SF3B3-206ENST00000565990 I6L893 689 aaPredicted RBP13.1□□□□□ -0.31
SF3B3-206ENST00000565990 CCR1P32246 355 aa13.1□□□□□ -0.31
SF3B3-206ENST00000565990 RDXP35241 583 aaKnown RBP13.1□□□□□ -0.31
SF3B3-206ENST00000565990 PCK1P35558 622 aa13.1□□□□□ -0.31
SF3B3-206ENST00000565990 SULT1E1P49888 294 aa13.1□□□□□ -0.31
SF3B3-206ENST00000565990 ATP11AP98196 1134 aa13.1□□□□□ -0.31
SF3B3-206ENST00000565990 DEUP1Q05D60 604 aa13.1□□□□□ -0.31
SF3B3-206ENST00000565990 MTA1Q13330 715 aa13.1□□□□□ -0.31
SF3B3-206ENST00000565990 MAP9Q49MG5 647 aa13.1□□□□□ -0.31
SF3B3-206ENST00000565990 ZC3H12AQ5D1E8 599 aaKnown RBP13.1□□□□□ -0.31
SF3B3-206ENST00000565990 BRMS1LQ5PSV4 323 aa13.1□□□□□ -0.31
SF3B3-206ENST00000565990 PAPD7Q5XG87 772 aaKnown RBP13.1□□□□□ -0.31
SF3B3-206ENST00000565990 SLC35F6Q8N357 371 aa13.1□□□□□ -0.31
SF3B3-206ENST00000565990 RNF10Q8N5U6 811 aaKnown RBP13.1□□□□□ -0.31
SF3B3-206ENST00000565990 FAM172AQ8WUF8 416 aa13.1□□□□□ -0.31
SF3B3-206ENST00000565990 DEPDC1BQ8WUY9 529 aa13.1□□□□□ -0.31
SF3B3-206ENST00000565990 OTUB2Q96DC9 234 aa13.1□□□□□ -0.31
SF3B3-206ENST00000565990 C1orf74Q96LT6 269 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms