RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 IL37Q9NZH6 218 aa9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 SUN2Q9UH99 717 aa9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 SCML1Q9UN30 329 aa9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 MAN2B2Q9Y2E5 1009 aa9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 FLNCQ14315 2725 aa9.52□□□□□ -0.89
VPS9D1-205ENST00000565452 ANAPC1Q9H1A4 1944 aa9.51□□□□□ -0.89
VPS9D1-205ENST00000565452 LRRC72A6NJI9 287 aa9.51□□□□□ -0.89
VPS9D1-205ENST00000565452 TISP43B9A030 160 aa9.51□□□□□ -0.89
VPS9D1-205ENST00000565452 SIGLEC6O43699 453 aa9.51□□□□□ -0.89
VPS9D1-205ENST00000565452 MAGEC1O60732 1142 aa9.51□□□□□ -0.89
VPS9D1-205ENST00000565452 CSO75390 466 aaKnown RBP9.51□□□□□ -0.89
VPS9D1-205ENST00000565452 TBX18O95935 607 aa9.51□□□□□ -0.89
VPS9D1-205ENST00000565452 PENKP01210 267 aaPredicted RBP9.51□□□□□ -0.89
VPS9D1-205ENST00000565452 WNT1P04628 370 aa9.51□□□□□ -0.89
VPS9D1-205ENST00000565452 CYBBP04839 570 aa9.51□□□□□ -0.89
VPS9D1-205ENST00000565452 TMEM191BP0C7N4 346 aa9.51□□□□□ -0.89
VPS9D1-205ENST00000565452 PRPHP41219 470 aa9.51□□□□□ -0.89
VPS9D1-205ENST00000565452 ZNF131P52739 623 aa9.51□□□□□ -0.89
VPS9D1-205ENST00000565452 CACNA2D1P54289 1103 aa9.51□□□□□ -0.89
VPS9D1-205ENST00000565452 GALCP54803 685 aa9.51□□□□□ -0.89
VPS9D1-205ENST00000565452 RPS14P62263 151 aaKnown RBP9.51□□□□□ -0.89
VPS9D1-205ENST00000565452 ZSCAN23Q3MJ62 389 aa9.51□□□□□ -0.89
VPS9D1-205ENST00000565452 USP30Q70CQ3 517 aa9.51□□□□□ -0.89
VPS9D1-205ENST00000565452 BRSK2Q8IWQ3 736 aa9.51□□□□□ -0.89
VPS9D1-205ENST00000565452 HPS3Q969F9 1004 aa9.51□□□□□ -0.89
VPS9D1-205ENST00000565452 KCNK16Q96T55 309 aa9.51□□□□□ -0.89
VPS9D1-205ENST00000565452 REEP2Q9BRK0 252 aa9.51□□□□□ -0.89
VPS9D1-205ENST00000565452 B3GNT5Q9BYG0 378 aa9.51□□□□□ -0.89
VPS9D1-205ENST00000565452 SLC2A11Q9BYW1 496 aa9.51□□□□□ -0.89
VPS9D1-205ENST00000565452 ZNF518BQ9C0D4 1074 aa9.51□□□□□ -0.89
VPS9D1-205ENST00000565452 FBXO44Q9H4M3 255 aa9.51□□□□□ -0.89
VPS9D1-205ENST00000565452 ZSCAN16Q9H4T2 348 aaPredicted RBP9.51□□□□□ -0.89
VPS9D1-205ENST00000565452 SIX4Q9UIU6 781 aa9.51□□□□□ -0.89
VPS9D1-205ENST00000565452 TPX2Q9ULW0 747 aaKnown RBP9.51□□□□□ -0.89
VPS9D1-205ENST00000565452 EXOC7Q9UPT5 735 aa9.51□□□□□ -0.89
VPS9D1-205ENST00000565452 LRRK2Q5S007 2527 aa9.51□□□□□ -0.89
VPS9D1-205ENST00000565452 ATP8B3O60423 1300 aa9.51□□□□□ -0.89
VPS9D1-205ENST00000565452 NBPF19A0A087WUL8 3843 aa9.51□□□□□ -0.89
VPS9D1-205ENST00000565452 TSC2P49815 1807 aa9.5□□□□□ -0.89
VPS9D1-205ENST00000565452 A0A1W2PR77 199 aa9.5□□□□□ -0.89
VPS9D1-205ENST00000565452 FAM92AA1XBS5 289 aa9.5□□□□□ -0.89
VPS9D1-205ENST00000565452 CLDN5O00501 218 aa9.5□□□□□ -0.89
VPS9D1-205ENST00000565452 RNASEH1O60930 286 aaKnown RBP9.5□□□□□ -0.89
VPS9D1-205ENST00000565452 TACC1O75410 805 aa9.5□□□□□ -0.89
VPS9D1-205ENST00000565452 PRPF6O94906 941 aaKnown RBP9.5□□□□□ -0.89
VPS9D1-205ENST00000565452 TNNC2P02585 160 aa9.5□□□□□ -0.89
VPS9D1-205ENST00000565452 SYT1P21579 422 aa9.5□□□□□ -0.89
VPS9D1-205ENST00000565452 AFMP43652 599 aa9.5□□□□□ -0.89
VPS9D1-205ENST00000565452 NXPH1P58417 271 aa9.5□□□□□ -0.89
VPS9D1-205ENST00000565452 IL17AQ16552 155 aa9.5□□□□□ -0.89
VPS9D1-205ENST00000565452 DUOXA2Q1HG44 320 aa9.5□□□□□ -0.89
VPS9D1-205ENST00000565452 FNDC3BQ53EP0 1204 aaKnown RBP9.5□□□□□ -0.89
VPS9D1-205ENST00000565452 SCARA3Q6AZY7 606 aa9.5□□□□□ -0.89
VPS9D1-205ENST00000565452 KANSL1Q7Z3B3 1105 aa9.5□□□□□ -0.89
VPS9D1-205ENST00000565452 BRAPQ7Z569 592 aa9.5□□□□□ -0.89
VPS9D1-205ENST00000565452 GPBP1Q86WP2 473 aa9.5□□□□□ -0.89
VPS9D1-205ENST00000565452 ARL14Q8N4G2 192 aa9.5□□□□□ -0.89
VPS9D1-205ENST00000565452 MFSD2AQ8NA29 543 aa9.5□□□□□ -0.89
VPS9D1-205ENST00000565452 SORCS1Q8WY21 1168 aa9.5□□□□□ -0.89
VPS9D1-205ENST00000565452 EXTL1Q92935 676 aa9.5□□□□□ -0.89
VPS9D1-205ENST00000565452 LIN37Q96GY3 246 aaPredicted RBP9.5□□□□□ -0.89
VPS9D1-205ENST00000565452 SERAC1Q96JX3 654 aa9.5□□□□□ -0.89
VPS9D1-205ENST00000565452 MED10Q9BTT4 135 aa9.5□□□□□ -0.89
VPS9D1-205ENST00000565452 DCLK3Q9C098 648 aa9.5□□□□□ -0.89
VPS9D1-205ENST00000565452 OSBPL2Q9H1P3 480 aa9.5□□□□□ -0.89
VPS9D1-205ENST00000565452 ST6GALNAC4Q9H4F1 302 aa9.5□□□□□ -0.89
VPS9D1-205ENST00000565452 TMEM30AQ9NV96 361 aa9.5□□□□□ -0.89
VPS9D1-205ENST00000565452 EVA1BQ9NVM1 165 aa9.5□□□□□ -0.89
VPS9D1-205ENST00000565452 WDR70Q9NW82 654 aa9.5□□□□□ -0.89
VPS9D1-205ENST00000565452 RBAKQ9NYW8 714 aaPredicted RBP9.5□□□□□ -0.89
VPS9D1-205ENST00000565452 SRPK3Q9UPE1 567 aa9.5□□□□□ -0.89
VPS9D1-205ENST00000565452 ABCA12Q86UK0 2595 aa9.5□□□□□ -0.89
VPS9D1-205ENST00000565452 ANKRD17O75179 2603 aaKnown RBP9.5□□□□□ -0.89
VPS9D1-205ENST00000565452 TCHHQ07283 1943 aa9.49□□□□□ -0.89
VPS9D1-205ENST00000565452 A8MXQ7 604 aa9.49□□□□□ -0.89
VPS9D1-205ENST00000565452 TRIM38O00635 465 aa9.49□□□□□ -0.89
VPS9D1-205ENST00000565452 STX6O43752 255 aa9.49□□□□□ -0.89
VPS9D1-205ENST00000565452 PPFIA2O75334 1257 aa9.49□□□□□ -0.89
VPS9D1-205ENST00000565452 TBCAO75347 108 aaKnown RBP9.49□□□□□ -0.89
VPS9D1-205ENST00000565452 DUSP3P51452 185 aaPredicted RBP9.49□□□□□ -0.89
VPS9D1-205ENST00000565452 CCR5P51681 352 aa9.49□□□□□ -0.89
VPS9D1-205ENST00000565452 SLC5A3P53794 718 aa9.49□□□□□ -0.89
VPS9D1-205ENST00000565452 SKOR1P84550 965 aa9.49□□□□□ -0.89
VPS9D1-205ENST00000565452 DHX8Q14562 1220 aaKnown RBP9.49□□□□□ -0.89
VPS9D1-205ENST00000565452 RILPL1Q5EBL4 403 aa9.49□□□□□ -0.89
VPS9D1-205ENST00000565452 FYB2Q5VWT5 728 aa9.49□□□□□ -0.89
VPS9D1-205ENST00000565452 ZNF776Q68DI1 518 aaPredicted RBP9.49□□□□□ -0.89
VPS9D1-205ENST00000565452 MCTP1Q6DN14 999 aa9.49□□□□□ -0.89
VPS9D1-205ENST00000565452 KLHDC10Q6PID8 442 aa9.49□□□□□ -0.89
VPS9D1-205ENST00000565452 NCEH1Q6PIU2 408 aa9.49□□□□□ -0.89
VPS9D1-205ENST00000565452 Q6ZNB5 142 aa9.49□□□□□ -0.89
VPS9D1-205ENST00000565452 ZNF720Q7Z2F6 126 aa9.49□□□□□ -0.89
VPS9D1-205ENST00000565452 TADA2BQ86TJ2 420 aa9.49□□□□□ -0.89
VPS9D1-205ENST00000565452 FAM26EQ8N5C1 309 aa9.49□□□□□ -0.89
VPS9D1-205ENST00000565452 B3GALNT2Q8NCR0 500 aa9.49□□□□□ -0.89
VPS9D1-205ENST00000565452 OR2T34Q8NGX1 318 aa9.49□□□□□ -0.89
VPS9D1-205ENST00000565452 SGF29Q96ES7 293 aa9.49□□□□□ -0.89
VPS9D1-205ENST00000565452 MRPL45Q9BRJ2 306 aaKnown RBP9.49□□□□□ -0.89
VPS9D1-205ENST00000565452 MTMR12Q9C0I1 747 aa9.49□□□□□ -0.89
VPS9D1-205ENST00000565452 TMEM245Q9H330 911 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms