RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 GOLGA6L7A0A1B0GV03 622 aa14.2□□□□□ -0.14
VPS9D1-204ENST00000565023 MED19A0JLT2 244 aaPredicted RBP14.2□□□□□ -0.14
VPS9D1-204ENST00000565023 LRRC10BA6NIK2 292 aa14.2□□□□□ -0.14
VPS9D1-204ENST00000565023 SMTNL1A8MU46 457 aa14.2□□□□□ -0.14
VPS9D1-204ENST00000565023 WASH3PC4AMC7 463 aa14.2□□□□□ -0.14
VPS9D1-204ENST00000565023 MOCS2O96007 188 aaPredicted RBP14.2□□□□□ -0.14
VPS9D1-204ENST00000565023 PENKP01210 267 aaPredicted RBP14.2□□□□□ -0.14
VPS9D1-204ENST00000565023 ACADSBP45954 432 aa14.2□□□□□ -0.14
VPS9D1-204ENST00000565023 DHPSP49366 369 aaPredicted RBP14.2□□□□□ -0.14
VPS9D1-204ENST00000565023 CREB5Q02930 508 aa14.2□□□□□ -0.14
VPS9D1-204ENST00000565023 LMNB2Q03252 620 aa14.2□□□□□ -0.14
VPS9D1-204ENST00000565023 KCNMA1Q12791 1236 aa14.2□□□□□ -0.14
VPS9D1-204ENST00000565023 IQCB1Q15051 598 aa14.2□□□□□ -0.14
VPS9D1-204ENST00000565023 DPY19L2P1Q6NXN4 242 aa14.2□□□□□ -0.14
VPS9D1-204ENST00000565023 RFWD3Q6PCD5 774 aa14.2□□□□□ -0.14
VPS9D1-204ENST00000565023 PRR23CQ6ZRP0 262 aa14.2□□□□□ -0.14
VPS9D1-204ENST00000565023 SCML4Q8N228 414 aa14.2□□□□□ -0.14
VPS9D1-204ENST00000565023 CPXM2Q8N436 756 aa14.2□□□□□ -0.14
VPS9D1-204ENST00000565023 DQX1Q8TE96 717 aaKnown RBP14.2□□□□□ -0.14
VPS9D1-204ENST00000565023 FAM81BQ96LP2 452 aa14.2□□□□□ -0.14
VPS9D1-204ENST00000565023 CIPCQ9C0C6 399 aa14.2□□□□□ -0.14
VPS9D1-204ENST00000565023 PLCB1Q9NQ66 1216 aa14.2□□□□□ -0.14
VPS9D1-204ENST00000565023 CDV3Q9UKY7 258 aaKnown RBP14.2□□□□□ -0.14
VPS9D1-204ENST00000565023 SYNJ2BP-COX16A0A087WUM0 186 aa14.19□□□□□ -0.14
VPS9D1-204ENST00000565023 FOXN3O00409 490 aaPredicted RBP14.19□□□□□ -0.14
VPS9D1-204ENST00000565023 PAPSS1O43252 624 aaPredicted RBP14.19□□□□□ -0.14
VPS9D1-204ENST00000565023 MAP3K13O43283 966 aa14.19□□□□□ -0.14
VPS9D1-204ENST00000565023 GDF9O60383 454 aa14.19□□□□□ -0.14
VPS9D1-204ENST00000565023 RHOBTB1O94844 696 aa14.19□□□□□ -0.14
VPS9D1-204ENST00000565023 EPN2O95208 641 aa14.19□□□□□ -0.14
VPS9D1-204ENST00000565023 CAVIN2O95810 425 aa14.19□□□□□ -0.14
VPS9D1-204ENST00000565023 SGSHP51688 502 aa14.19□□□□□ -0.14
VPS9D1-204ENST00000565023 COPB1P53618 953 aaKnown RBP14.19□□□□□ -0.14
VPS9D1-204ENST00000565023 PTK2Q05397 1052 aa14.19□□□□□ -0.14
VPS9D1-204ENST00000565023 PDCLQ13371 301 aa14.19□□□□□ -0.14
VPS9D1-204ENST00000565023 AASDHQ4L235 1098 aaPredicted RBP14.19□□□□□ -0.14
VPS9D1-204ENST00000565023 MPPE1Q53F39 396 aa14.19□□□□□ -0.14
VPS9D1-204ENST00000565023 SMYD5Q6GMV2 418 aa14.19□□□□□ -0.14
VPS9D1-204ENST00000565023 MSANTD2Q6P1R3 559 aa14.19□□□□□ -0.14
VPS9D1-204ENST00000565023 APTXQ7Z2E3 356 aaKnown RBP14.19□□□□□ -0.14
VPS9D1-204ENST00000565023 DEFB119Q8N690 84 aa14.19□□□□□ -0.14
VPS9D1-204ENST00000565023 C12orf50Q8NA57 414 aaPredicted RBP14.19□□□□□ -0.14
VPS9D1-204ENST00000565023 C1orf131Q8NDD1 294 aaKnown RBP14.19□□□□□ -0.14
VPS9D1-204ENST00000565023 ANKRD20A12PQ8NF67 263 aa14.19□□□□□ -0.14
VPS9D1-204ENST00000565023 SHC3Q92529 594 aa14.19□□□□□ -0.14
VPS9D1-204ENST00000565023 TMA16Q96EY4 203 aaKnown RBP14.19□□□□□ -0.14
VPS9D1-204ENST00000565023 SPACA7Q96KW9 195 aa14.19□□□□□ -0.14
VPS9D1-204ENST00000565023 SLC4A5Q9BY07 1137 aa14.19□□□□□ -0.14
VPS9D1-204ENST00000565023 SLC6A17Q9H1V8 727 aa14.19□□□□□ -0.14
VPS9D1-204ENST00000565023 VPS16Q9H269 839 aa14.19□□□□□ -0.14
VPS9D1-204ENST00000565023 PDCL3Q9H2J4 239 aa14.19□□□□□ -0.14
VPS9D1-204ENST00000565023 COX16Q9P0S2 106 aa14.19□□□□□ -0.14
VPS9D1-204ENST00000565023 STIM2Q9P246 746 aa14.19□□□□□ -0.14
VPS9D1-204ENST00000565023 FHOD1Q9Y613 1164 aa14.19□□□□□ -0.14
VPS9D1-204ENST00000565023 ZBTB24O43167 697 aaPredicted RBP14.18□□□□□ -0.14
VPS9D1-204ENST00000565023 TBL1XO60907 577 aa14.18□□□□□ -0.14
VPS9D1-204ENST00000565023 GRAP2O75791 330 aa14.18□□□□□ -0.14
VPS9D1-204ENST00000565023 FYNP06241 537 aa14.18□□□□□ -0.14
VPS9D1-204ENST00000565023 TPM2P07951 284 aa14.18□□□□□ -0.14
VPS9D1-204ENST00000565023 ATP1A3P13637 1013 aa14.18□□□□□ -0.14
VPS9D1-204ENST00000565023 GABRG2P18507 467 aa14.18□□□□□ -0.14
VPS9D1-204ENST00000565023 CDK11BP21127 795 aaKnown RBP14.18□□□□□ -0.14
VPS9D1-204ENST00000565023 KCNA4P22459 653 aa14.18□□□□□ -0.14
VPS9D1-204ENST00000565023 KRT9P35527 623 aa14.18□□□□□ -0.14
VPS9D1-204ENST00000565023 MPLP40238 635 aa14.18□□□□□ -0.14
VPS9D1-204ENST00000565023 ARID5AQ03989 594 aa14.18□□□□□ -0.14
VPS9D1-204ENST00000565023 DRAP1Q14919 205 aaPredicted RBP14.18□□□□□ -0.14
VPS9D1-204ENST00000565023 TAF5Q15542 800 aa14.18□□□□□ -0.14
VPS9D1-204ENST00000565023 CSRP2Q16527 193 aa14.18□□□□□ -0.14
VPS9D1-204ENST00000565023 SYPL2Q5VXT5 272 aa14.18□□□□□ -0.14
VPS9D1-204ENST00000565023 OR6B2Q6IFH4 312 aa14.18□□□□□ -0.14
VPS9D1-204ENST00000565023 TCEAL6Q6IPX3 200 aa14.18□□□□□ -0.14
VPS9D1-204ENST00000565023 KIAA1211LQ6NV74 962 aa14.18□□□□□ -0.14
VPS9D1-204ENST00000565023 KIAA1324Q6UXG2 1013 aaKnown RBP14.18□□□□□ -0.14
VPS9D1-204ENST00000565023 DGLUCYQ7Z3D6 616 aa14.18□□□□□ -0.14
VPS9D1-204ENST00000565023 ANKS1BQ7Z6G8 1248 aa14.18□□□□□ -0.14
VPS9D1-204ENST00000565023 TAC4Q86UU9 113 aa14.18□□□□□ -0.14
VPS9D1-204ENST00000565023 SLC47A2Q86VL8 602 aa14.18□□□□□ -0.14
VPS9D1-204ENST00000565023 CACUL1Q86Y37 369 aa14.18□□□□□ -0.14
VPS9D1-204ENST00000565023 IPO4Q8TEX9 1081 aaKnown RBP14.18□□□□□ -0.14
VPS9D1-204ENST00000565023 UCMAQ8WVF2 138 aa14.18□□□□□ -0.14
VPS9D1-204ENST00000565023 SORCS1Q8WY21 1168 aa14.18□□□□□ -0.14
VPS9D1-204ENST00000565023 TCEAL3Q969E4 200 aa14.18□□□□□ -0.14
VPS9D1-204ENST00000565023 PIWIL1Q96J94 861 aaKnown RBP14.18□□□□□ -0.14
VPS9D1-204ENST00000565023 ZC3H10Q96K80 434 aaKnown RBP14.18□□□□□ -0.14
VPS9D1-204ENST00000565023 CBX8Q9HC52 389 aa14.18□□□□□ -0.14
VPS9D1-204ENST00000565023 FBXO10Q9UK96 956 aa14.18□□□□□ -0.14
VPS9D1-204ENST00000565023 STARD13Q9Y3M8 1113 aa14.18□□□□□ -0.14
VPS9D1-204ENST00000565023 STON1Q9Y6Q2 735 aa14.18□□□□□ -0.14
VPS9D1-204ENST00000565023 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.17□□□□□ -0.14
VPS9D1-204ENST00000565023 DCDC2BA2VCK2 349 aa14.17□□□□□ -0.14
VPS9D1-204ENST00000565023 LGALS16A8MUM7 142 aa14.17□□□□□ -0.14
VPS9D1-204ENST00000565023 PRR5-ARHGAP8B1AHC4 643 aa14.17□□□□□ -0.14
VPS9D1-204ENST00000565023 SART1O43290 800 aaKnown RBP14.17□□□□□ -0.14
VPS9D1-204ENST00000565023 ACSL4O60488 711 aa14.17□□□□□ -0.14
VPS9D1-204ENST00000565023 LRP3O75074 770 aa14.17□□□□□ -0.14
VPS9D1-204ENST00000565023 HOXD9P28356 352 aaPredicted RBP14.17□□□□□ -0.14
VPS9D1-204ENST00000565023 SLC6A4P31645 630 aa14.17□□□□□ -0.14
VPS9D1-204ENST00000565023 CLCN1P35523 988 aa14.17□□□□□ -0.14
VPS9D1-204ENST00000565023 IL12RB1P42701 662 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms