RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 TADA3O75528 432 aa11.52□□□□□ -0.57
SF3B3-205ENST00000564899 RFPL2O75678 378 aa11.52□□□□□ -0.57
SF3B3-205ENST00000564899 ENDOD1O94919 500 aa11.52□□□□□ -0.57
SF3B3-205ENST00000564899 F9P00740 461 aa11.52□□□□□ -0.57
SF3B3-205ENST00000564899 IGLV3-25P01717 112 aa11.52□□□□□ -0.57
SF3B3-205ENST00000564899 HNRNPA1P09651 372 aaKnown RBP eCLIP11.52□□□□□ -0.57
SF3B3-205ENST00000564899 PPP3CCP48454 512 aa11.52□□□□□ -0.57
SF3B3-205ENST00000564899 EFEMP1Q12805 493 aa11.52□□□□□ -0.57
SF3B3-205ENST00000564899 TUBB2AQ13885 445 aa11.52□□□□□ -0.57
SF3B3-205ENST00000564899 ODF2Q5BJF6 829 aa11.52□□□□□ -0.57
SF3B3-205ENST00000564899 KCNT1Q5JUK3 1230 aa11.52□□□□□ -0.57
SF3B3-205ENST00000564899 C10orf120Q5SQS8 335 aa11.52□□□□□ -0.57
SF3B3-205ENST00000564899 SEL1L2Q5TEA6 688 aa11.52□□□□□ -0.57
SF3B3-205ENST00000564899 DCAF12L1Q5VU92 463 aa11.52□□□□□ -0.57
SF3B3-205ENST00000564899 SNX30Q5VWJ9 437 aa11.52□□□□□ -0.57
SF3B3-205ENST00000564899 ASTLQ6HA08 431 aaPredicted RBP11.52□□□□□ -0.57
SF3B3-205ENST00000564899 ERMP1Q7Z2K6 904 aa11.52□□□□□ -0.57
SF3B3-205ENST00000564899 TADA2BQ86TJ2 420 aa11.52□□□□□ -0.57
SF3B3-205ENST00000564899 NKD2Q969F2 451 aaPredicted RBP11.52□□□□□ -0.57
SF3B3-205ENST00000564899 ACSF2Q96CM8 615 aaPredicted RBP11.52□□□□□ -0.57
SF3B3-205ENST00000564899 CAPZA3Q96KX2 299 aa11.52□□□□□ -0.57
SF3B3-205ENST00000564899 GCNAQ96QF7 691 aa11.52□□□□□ -0.57
SF3B3-205ENST00000564899 TUBB2BQ9BVA1 445 aa11.52□□□□□ -0.57
SF3B3-205ENST00000564899 CCSER2Q9H7U1 834 aa11.52□□□□□ -0.57
SF3B3-205ENST00000564899 IL21Q9HBE4 155 aa11.52□□□□□ -0.57
SF3B3-205ENST00000564899 PIGVQ9NUD9 493 aa11.52□□□□□ -0.57
SF3B3-205ENST00000564899 ZDHHC7Q9NXF8 308 aa11.52□□□□□ -0.57
SF3B3-205ENST00000564899 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.52□□□□□ -0.57
SF3B3-205ENST00000564899 SFMBT1Q9UHJ3 866 aa11.52□□□□□ -0.57
SF3B3-205ENST00000564899 RASAL2Q9UJF2 1139 aa11.52□□□□□ -0.57
SF3B3-205ENST00000564899 MRFAP1Q9Y605 127 aa11.52□□□□□ -0.57
SF3B3-205ENST00000564899 DENND4AQ7Z401 1863 aa11.51□□□□□ -0.57
SF3B3-205ENST00000564899 LRRD1A4D1F6 860 aa11.51□□□□□ -0.57
SF3B3-205ENST00000564899 MDM4O15151 490 aa11.51□□□□□ -0.57
SF3B3-205ENST00000564899 IRAK2O43187 625 aa11.51□□□□□ -0.57
SF3B3-205ENST00000564899 MSI1O43347 362 aaKnown RBP11.51□□□□□ -0.57
SF3B3-205ENST00000564899 KRT37O76014 449 aa11.51□□□□□ -0.57
SF3B3-205ENST00000564899 F11P03951 625 aa11.51□□□□□ -0.57
SF3B3-205ENST00000564899 POU2F2P09086 479 aa11.51□□□□□ -0.57
SF3B3-205ENST00000564899 RARAP10276 462 aa11.51□□□□□ -0.57
SF3B3-205ENST00000564899 PYGMP11217 842 aa11.51□□□□□ -0.57
SF3B3-205ENST00000564899 GABRR2P28476 465 aa11.51□□□□□ -0.57
SF3B3-205ENST00000564899 TUBP50607 506 aa11.51□□□□□ -0.57
SF3B3-205ENST00000564899 ZNF211Q13398 564 aaPredicted RBP11.51□□□□□ -0.57
SF3B3-205ENST00000564899 WHAMMP3Q1A5X7 153 aa11.51□□□□□ -0.57
SF3B3-205ENST00000564899 ATP13A4Q4VNC1 1196 aa11.51□□□□□ -0.57
SF3B3-205ENST00000564899 PABPC1LQ4VXU2 614 aaKnown RBP11.51□□□□□ -0.57
SF3B3-205ENST00000564899 BOLA3Q53S33 107 aa11.51□□□□□ -0.57
SF3B3-205ENST00000564899 HECTD3Q5T447 861 aa11.51□□□□□ -0.57
SF3B3-205ENST00000564899 CCDC181Q5TID7 509 aa11.51□□□□□ -0.57
SF3B3-205ENST00000564899 CYP4V2Q6ZWL3 525 aaPredicted RBP11.51□□□□□ -0.57
SF3B3-205ENST00000564899 TMC8Q8IU68 726 aa11.51□□□□□ -0.57
SF3B3-205ENST00000564899 CCDC50Q8IVM0 306 aa11.51□□□□□ -0.57
SF3B3-205ENST00000564899 HS6ST3Q8IZP7 471 aa11.51□□□□□ -0.57
SF3B3-205ENST00000564899 CCDC185Q8N715 623 aa11.51□□□□□ -0.57
SF3B3-205ENST00000564899 EXD1Q8NHP7 514 aa11.51□□□□□ -0.57
SF3B3-205ENST00000564899 TEKT4Q8WW24 435 aa11.51□□□□□ -0.57
SF3B3-205ENST00000564899 HSPH1Q92598 858 aa11.51□□□□□ -0.57
SF3B3-205ENST00000564899 RNF34Q969K3 372 aa11.51□□□□□ -0.57
SF3B3-205ENST00000564899 RBM41Q96IZ5 413 aaKnown RBP11.51□□□□□ -0.57
SF3B3-205ENST00000564899 CORO1BQ9BR76 489 aa11.51□□□□□ -0.57
SF3B3-205ENST00000564899 SNRNP25Q9BV90 132 aaKnown RBP11.51□□□□□ -0.57
SF3B3-205ENST00000564899 LRRC3Q9BY71 257 aa11.51□□□□□ -0.57
SF3B3-205ENST00000564899 NACA2Q9H009 215 aa11.51□□□□□ -0.57
SF3B3-205ENST00000564899 IRF2BPLQ9H1B7 796 aa11.51□□□□□ -0.57
SF3B3-205ENST00000564899 L2HGDHQ9H9P8 463 aa11.51□□□□□ -0.57
SF3B3-205ENST00000564899 WDR6Q9NNW5 1121 aaKnown RBP11.51□□□□□ -0.57
SF3B3-205ENST00000564899 ASAH2Q9NR71 780 aa11.51□□□□□ -0.57
SF3B3-205ENST00000564899 TMEM51Q9NW97 253 aa11.51□□□□□ -0.57
SF3B3-205ENST00000564899 GPATCH2LQ9NWQ4 482 aa11.51□□□□□ -0.57
SF3B3-205ENST00000564899 MARCH2Q9P0N8 246 aa11.51□□□□□ -0.57
SF3B3-205ENST00000564899 LIMD1Q9UGP4 676 aa11.51□□□□□ -0.57
SF3B3-205ENST00000564899 MYO16Q9Y6X6 1858 aa11.51□□□□□ -0.57
SF3B3-205ENST00000564899 CHD8Q9HCK8 2581 aa11.5□□□□□ -0.57
SF3B3-205ENST00000564899 ZRANB2O95218 330 aaKnown RBP eCLIP11.5□□□□□ -0.57
SF3B3-205ENST00000564899 FGF19O95750 216 aa11.5□□□□□ -0.57
SF3B3-205ENST00000564899 TBX18O95935 607 aa11.5□□□□□ -0.57
SF3B3-205ENST00000564899 MYL4P12829 197 aa11.5□□□□□ -0.57
SF3B3-205ENST00000564899 CDC25CP30307 473 aa11.5□□□□□ -0.57
SF3B3-205ENST00000564899 CETN2P41208 172 aa11.5□□□□□ -0.57
SF3B3-205ENST00000564899 CXCR3P49682 368 aa11.5□□□□□ -0.57
SF3B3-205ENST00000564899 CKAP4Q07065 602 aaKnown RBP11.5□□□□□ -0.57
SF3B3-205ENST00000564899 KRT81Q14533 505 aa11.5□□□□□ -0.57
SF3B3-205ENST00000564899 ARL13BQ3SXY8 428 aa11.5□□□□□ -0.57
SF3B3-205ENST00000564899 RARS2Q5T160 578 aaKnown RBP11.5□□□□□ -0.57
SF3B3-205ENST00000564899 ERMARDQ5T6L9 678 aa11.5□□□□□ -0.57
SF3B3-205ENST00000564899 AADACL2Q6P093 401 aa11.5□□□□□ -0.57
SF3B3-205ENST00000564899 KLHDC10Q6PID8 442 aa11.5□□□□□ -0.57
SF3B3-205ENST00000564899 TMEM150AQ86TG1 271 aa11.5□□□□□ -0.57
SF3B3-205ENST00000564899 MIB1Q86YT6 1006 aa11.5□□□□□ -0.57
SF3B3-205ENST00000564899 CREG2Q8IUH2 290 aa11.5□□□□□ -0.57
SF3B3-205ENST00000564899 RCOR2Q8IZ40 523 aa11.5□□□□□ -0.57
SF3B3-205ENST00000564899 ZNF276Q8N554 614 aa11.5□□□□□ -0.57
SF3B3-205ENST00000564899 LEMD2Q8NC56 503 aa11.5□□□□□ -0.57
SF3B3-205ENST00000564899 KCTD6Q8NC69 237 aa11.5□□□□□ -0.57
SF3B3-205ENST00000564899 FLCNQ8NFG4 579 aa11.5□□□□□ -0.57
SF3B3-205ENST00000564899 RAPGEF5Q92565 580 aa11.5□□□□□ -0.57
SF3B3-205ENST00000564899 MRPS31Q92665 395 aaKnown RBP11.5□□□□□ -0.57
SF3B3-205ENST00000564899 NTAN1Q96AB6 310 aa11.5□□□□□ -0.57
SF3B3-205ENST00000564899 RNF25Q96BH1 459 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms