RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 CHI3L2Q15782 390 aa20.63■□□□□ 0.89
MSLN-205ENST00000563941 CCL15Q16663 113 aa20.63■□□□□ 0.89
MSLN-205ENST00000563941 SLC25A52Q3SY17 297 aa20.63■□□□□ 0.89
MSLN-205ENST00000563941 FAM149B1Q96BN6 582 aa20.63■□□□□ 0.89
MSLN-205ENST00000563941 MS4A4AQ96JQ5 239 aa20.63■□□□□ 0.89
MSLN-205ENST00000563941 BTBD10Q9BSF8 475 aa20.63■□□□□ 0.89
MSLN-205ENST00000563941 CADM1Q9BY67 442 aaKnown RBP20.63■□□□□ 0.89
MSLN-205ENST00000563941 GEMIN8Q9NWZ8 242 aaKnown RBP20.63■□□□□ 0.89
MSLN-205ENST00000563941 MOCS1Q9NZB8 636 aa20.63■□□□□ 0.89
MSLN-205ENST00000563941 RPL26L1Q9UNX3 145 aaKnown RBP20.63■□□□□ 0.89
MSLN-205ENST00000563941 CCDC195A0A1B0GUA6 201 aa20.63■□□□□ 0.89
MSLN-205ENST00000563941 WDR27A2RRH5 827 aa20.63■□□□□ 0.89
MSLN-205ENST00000563941 CYB561D2O14569 222 aa20.63■□□□□ 0.89
MSLN-205ENST00000563941 XPO1O14980 1071 aaKnown RBP20.63■□□□□ 0.89
MSLN-205ENST00000563941 CALB2P22676 271 aa20.63■□□□□ 0.89
MSLN-205ENST00000563941 CCNG1P51959 295 aa20.63■□□□□ 0.89
MSLN-205ENST00000563941 SOX4Q06945 474 aaPredicted RBP20.63■□□□□ 0.89
MSLN-205ENST00000563941 ADIGQ0VDE8 80 aa20.63■□□□□ 0.89
MSLN-205ENST00000563941 CES4AQ5XG92 561 aa20.63■□□□□ 0.89
MSLN-205ENST00000563941 NUDCD3Q8IVD9 361 aa20.63■□□□□ 0.89
MSLN-205ENST00000563941 ADGRF2Q8IZF7 708 aa20.63■□□□□ 0.89
MSLN-205ENST00000563941 ZNF570Q96NI8 536 aa20.63■□□□□ 0.89
MSLN-205ENST00000563941 DNAI2Q9GZS0 605 aa20.63■□□□□ 0.89
MSLN-205ENST00000563941 DENND2DQ9H6A0 471 aaPredicted RBP20.63■□□□□ 0.89
MSLN-205ENST00000563941 ARHGEF4Q9NR80 690 aa20.63■□□□□ 0.89
MSLN-205ENST00000563941 RCOR3Q9P2K3 495 aaPredicted RBP20.63■□□□□ 0.89
MSLN-205ENST00000563941 ZNF638Q14966 1978 aaKnown RBP20.62■□□□□ 0.89
MSLN-205ENST00000563941 MBLAC1A4D2B0 266 aaPredicted RBP20.62■□□□□ 0.89
MSLN-205ENST00000563941 DYNC1LI2O43237 492 aaPredicted RBP20.62■□□□□ 0.89
MSLN-205ENST00000563941 XPOTO43592 962 aaKnown RBP20.62■□□□□ 0.89
MSLN-205ENST00000563941 AXLP30530 894 aa20.62■□□□□ 0.89
MSLN-205ENST00000563941 CRHR1P34998 444 aa20.62■□□□□ 0.89
MSLN-205ENST00000563941 SV2CQ496J9 727 aa20.62■□□□□ 0.89
MSLN-205ENST00000563941 STEAP4Q687X5 459 aa20.62■□□□□ 0.89
MSLN-205ENST00000563941 BZW1Q7L1Q6 419 aaKnown RBP20.62■□□□□ 0.89
MSLN-205ENST00000563941 TTC7BQ86TV6 843 aa20.62■□□□□ 0.89
MSLN-205ENST00000563941 PIGZQ86VD9 579 aa20.62■□□□□ 0.89
MSLN-205ENST00000563941 COLGALT1Q8NBJ5 622 aa20.62■□□□□ 0.89
MSLN-205ENST00000563941 KCNV2Q8TDN2 545 aa20.62■□□□□ 0.89
MSLN-205ENST00000563941 TMEM40Q8WWA1 233 aa20.62■□□□□ 0.89
MSLN-205ENST00000563941 NUDCD1Q96RS6 583 aa20.62■□□□□ 0.89
MSLN-205ENST00000563941 RNF39Q9H2S5 420 aa20.62■□□□□ 0.89
MSLN-205ENST00000563941 FCHO1O14526 889 aa20.62■□□□□ 0.89
MSLN-205ENST00000563941 HUS1O60921 280 aa20.62■□□□□ 0.89
MSLN-205ENST00000563941 DAB1O75553 588 aa20.62■□□□□ 0.89
MSLN-205ENST00000563941 F2P00734 622 aa20.62■□□□□ 0.89
MSLN-205ENST00000563941 MLNP12872 115 aa20.62■□□□□ 0.89
MSLN-205ENST00000563941 KCNE1P15382 129 aa20.62■□□□□ 0.89
MSLN-205ENST00000563941 GNAZP19086 355 aa20.62■□□□□ 0.89
MSLN-205ENST00000563941 CLNS1AP54105 237 aaKnown RBP20.62■□□□□ 0.89
MSLN-205ENST00000563941 OCRLQ01968 901 aa20.62■□□□□ 0.89
MSLN-205ENST00000563941 KRT72Q14CN4 511 aa20.62■□□□□ 0.89
MSLN-205ENST00000563941 TEX44Q53QW1 395 aa20.62■□□□□ 0.89
MSLN-205ENST00000563941 DCAF6Q58WW2 860 aa20.62■□□□□ 0.89
MSLN-205ENST00000563941 OTUD1Q5VV17 481 aaPredicted RBP20.62■□□□□ 0.89
MSLN-205ENST00000563941 CASC4Q6P4E1 433 aa20.62■□□□□ 0.89
MSLN-205ENST00000563941 LIMS2Q7Z4I7 341 aa20.62■□□□□ 0.89
MSLN-205ENST00000563941 HACE1Q8IYU2 909 aa20.62■□□□□ 0.89
MSLN-205ENST00000563941 UNC5BQ8IZJ1 945 aa20.62■□□□□ 0.89
MSLN-205ENST00000563941 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.62■□□□□ 0.89
MSLN-205ENST00000563941 TTC8Q8TAM2 541 aa20.62■□□□□ 0.89
MSLN-205ENST00000563941 NPLOC4Q8TAT6 608 aa20.62■□□□□ 0.89
MSLN-205ENST00000563941 DNAJB3Q8WWF6 145 aa20.62■□□□□ 0.89
MSLN-205ENST00000563941 BRI3BPQ8WY22 251 aa20.62■□□□□ 0.89
MSLN-205ENST00000563941 TNIP3Q96KP6 325 aa20.62■□□□□ 0.89
MSLN-205ENST00000563941 KCNK4Q9NYG8 393 aa20.62■□□□□ 0.89
MSLN-205ENST00000563941 MYO18AQ92614 2054 aaKnown RBP20.61■□□□□ 0.89
MSLN-205ENST00000563941 RNF103O00237 685 aa20.61■□□□□ 0.89
MSLN-205ENST00000563941 TPBGLP0DKB5 382 aa20.61■□□□□ 0.89
MSLN-205ENST00000563941 CNTFP26441 200 aa20.61■□□□□ 0.89
MSLN-205ENST00000563941 PITX1P78337 314 aaPredicted RBP20.61■□□□□ 0.89
MSLN-205ENST00000563941 CRADDP78560 199 aa20.61■□□□□ 0.89
MSLN-205ENST00000563941 HIC1Q14526 733 aa20.61■□□□□ 0.89
MSLN-205ENST00000563941 SNX17Q15036 470 aa20.61■□□□□ 0.89
MSLN-205ENST00000563941 XKR4Q5GH76 650 aa20.61■□□□□ 0.89
MSLN-205ENST00000563941 TIFABQ6ZNK6 161 aa20.61■□□□□ 0.89
MSLN-205ENST00000563941 CYS1Q717R9 158 aa20.61■□□□□ 0.89
MSLN-205ENST00000563941 ALYREFQ86V81 257 aaKnown RBP20.61■□□□□ 0.89
MSLN-205ENST00000563941 OSTM1Q86WC4 334 aa20.61■□□□□ 0.89
MSLN-205ENST00000563941 PSTKQ8IV42 348 aaKnown RBP20.61■□□□□ 0.89
MSLN-205ENST00000563941 PDCD7Q8N8D1 485 aaKnown RBP20.61■□□□□ 0.89
MSLN-205ENST00000563941 NETO2Q8NC67 525 aa20.61■□□□□ 0.89
MSLN-205ENST00000563941 B3GALNT2Q8NCR0 500 aa20.61■□□□□ 0.89
MSLN-205ENST00000563941 STKLD1Q8NE28 680 aa20.61■□□□□ 0.89
MSLN-205ENST00000563941 RNF139Q8WU17 664 aa20.61■□□□□ 0.89
MSLN-205ENST00000563941 ZNF408Q9H9D4 720 aa20.61■□□□□ 0.89
MSLN-205ENST00000563941 TMPRSS4Q9NRS4 437 aa20.61■□□□□ 0.89
MSLN-205ENST00000563941 ENTPD5O75356 428 aa20.6■□□□□ 0.89
MSLN-205ENST00000563941 ALDH1A2O94788 518 aa20.6■□□□□ 0.89
MSLN-205ENST00000563941 STK10O94804 968 aaKnown RBP20.6■□□□□ 0.89
MSLN-205ENST00000563941 AP1B1Q10567 949 aa20.6■□□□□ 0.89
MSLN-205ENST00000563941 UBXN11Q5T124 520 aa20.6■□□□□ 0.89
MSLN-205ENST00000563941 RFWD3Q6PCD5 774 aa20.6■□□□□ 0.89
MSLN-205ENST00000563941 MARK2Q7KZI7 788 aaKnown RBP20.6■□□□□ 0.89
MSLN-205ENST00000563941 ARID3BQ8IVW6 561 aaPredicted RBP20.6■□□□□ 0.89
MSLN-205ENST00000563941 ENDOVQ8N8Q3 282 aaKnown RBP20.6■□□□□ 0.89
MSLN-205ENST00000563941 RAB3IL1Q8TBN0 382 aa20.6■□□□□ 0.89
MSLN-205ENST00000563941 SH3TC2Q8TF17 1288 aa20.6■□□□□ 0.89
MSLN-205ENST00000563941 NMUR2Q9GZQ4 415 aa20.6■□□□□ 0.89
MSLN-205ENST00000563941 EIF2B3Q9NR50 452 aaKnown RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms