RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 KCNA1Q09470 495 aa16.74■□□□□ 0.27
RNF40-205ENST00000563909 DPYDQ12882 1025 aa16.74■□□□□ 0.27
RNF40-205ENST00000563909 ALCAMQ13740 583 aa16.74■□□□□ 0.27
RNF40-205ENST00000563909 STXBP4Q6ZWJ1 553 aa16.74■□□□□ 0.27
RNF40-205ENST00000563909 DHX40Q8IX18 779 aaKnown RBP16.74■□□□□ 0.27
RNF40-205ENST00000563909 DCBLD1Q8N8Z6 715 aa16.74■□□□□ 0.27
RNF40-205ENST00000563909 SAP25Q8TEE9 199 aa16.74■□□□□ 0.27
RNF40-205ENST00000563909 SAAL1Q96ER3 474 aa16.74■□□□□ 0.27
RNF40-205ENST00000563909 HIC2Q96JB3 615 aa16.74■□□□□ 0.27
RNF40-205ENST00000563909 MMS19Q96T76 1030 aa16.74■□□□□ 0.27
RNF40-205ENST00000563909 ELF4Q99607 663 aaPredicted RBP16.74■□□□□ 0.27
RNF40-205ENST00000563909 ACE2Q9BYF1 805 aaPredicted RBP16.74■□□□□ 0.27
RNF40-205ENST00000563909 FAM117AQ9C073 453 aa16.74■□□□□ 0.27
RNF40-205ENST00000563909 MTMR12Q9C0I1 747 aa16.74■□□□□ 0.27
RNF40-205ENST00000563909 ELOVL4Q9GZR5 314 aa16.74■□□□□ 0.27
RNF40-205ENST00000563909 EXOC1Q9NV70 894 aa16.74■□□□□ 0.27
RNF40-205ENST00000563909 RBAKQ9NYW8 714 aaPredicted RBP16.74■□□□□ 0.27
RNF40-205ENST00000563909 EXOC7Q9UPT5 735 aa16.74■□□□□ 0.27
RNF40-205ENST00000563909 PCDHB13Q9Y5F0 798 aa16.74■□□□□ 0.27
RNF40-205ENST00000563909 CLDN5O00501 218 aa16.73■□□□□ 0.27
RNF40-205ENST00000563909 KLK10O43240 276 aa16.73■□□□□ 0.27
RNF40-205ENST00000563909 KLRC4O43908 158 aa16.73■□□□□ 0.27
RNF40-205ENST00000563909 SMC2O95347 1197 aa16.73■□□□□ 0.27
RNF40-205ENST00000563909 SEMA4FO95754 770 aa16.73■□□□□ 0.27
RNF40-205ENST00000563909 LDHAP00338 332 aaKnown RBP16.73■□□□□ 0.27
RNF40-205ENST00000563909 EPHX1P07099 455 aa16.73■□□□□ 0.27
RNF40-205ENST00000563909 PTPN1P18031 435 aaKnown RBP16.73■□□□□ 0.27
RNF40-205ENST00000563909 PRKCHP24723 683 aa16.73■□□□□ 0.27
RNF40-205ENST00000563909 BCAT1P54687 386 aa16.73■□□□□ 0.27
RNF40-205ENST00000563909 ILKQ13418 452 aa16.73■□□□□ 0.27
RNF40-205ENST00000563909 GEN1Q17RS7 908 aa16.73■□□□□ 0.27
RNF40-205ENST00000563909 FAM26FQ5R3K3 315 aa16.73■□□□□ 0.27
RNF40-205ENST00000563909 CACTIN-AS1Q8N1I8 211 aa16.73■□□□□ 0.27
RNF40-205ENST00000563909 UCMAQ8WVF2 138 aa16.73■□□□□ 0.27
RNF40-205ENST00000563909 KCNE4Q8WWG9 221 aa16.73■□□□□ 0.27
RNF40-205ENST00000563909 ZNF578Q96N58 590 aaPredicted RBP16.73■□□□□ 0.27
RNF40-205ENST00000563909 ACCSQ96QU6 501 aa16.73■□□□□ 0.27
RNF40-205ENST00000563909 KCNK16Q96T55 309 aa16.73■□□□□ 0.27
RNF40-205ENST00000563909 STRA6Q9BX79 667 aa16.73■□□□□ 0.27
RNF40-205ENST00000563909 SNX25Q9H3E2 840 aa16.73■□□□□ 0.27
RNF40-205ENST00000563909 TBC1D7Q9P0N9 293 aa16.73■□□□□ 0.27
RNF40-205ENST00000563909 LSM7Q9UK45 103 aaKnown RBP16.73■□□□□ 0.27
RNF40-205ENST00000563909 FBXO10Q9UK96 956 aa16.73■□□□□ 0.27
RNF40-205ENST00000563909 SLC27A6Q9Y2P4 619 aa16.73■□□□□ 0.27
RNF40-205ENST00000563909 VILLO15195 856 aa16.72■□□□□ 0.27
RNF40-205ENST00000563909 GCNT3O95395 438 aa16.72■□□□□ 0.27
RNF40-205ENST00000563909 TBX18O95935 607 aa16.72■□□□□ 0.27
RNF40-205ENST00000563909 MBD3O95983 291 aa16.72■□□□□ 0.27
RNF40-205ENST00000563909 TMEM191BP0C7N4 346 aa16.72■□□□□ 0.27
RNF40-205ENST00000563909 PTMSP20962 102 aa16.72■□□□□ 0.27
RNF40-205ENST00000563909 MFAP3P55082 362 aa16.72■□□□□ 0.27
RNF40-205ENST00000563909 INSM1Q01101 510 aaPredicted RBP16.72■□□□□ 0.27
RNF40-205ENST00000563909 EHHADHQ08426 723 aa16.72■□□□□ 0.27
RNF40-205ENST00000563909 PNOCQ13519 176 aa16.72■□□□□ 0.27
RNF40-205ENST00000563909 ZNF234Q14588 700 aa16.72■□□□□ 0.27
RNF40-205ENST00000563909 SHBQ15464 509 aa16.72■□□□□ 0.27
RNF40-205ENST00000563909 KMT5BQ4FZB7 885 aa16.72■□□□□ 0.27
RNF40-205ENST00000563909 KIAA1614Q5VZ46 1190 aa16.72■□□□□ 0.27
RNF40-205ENST00000563909 KDM7AQ6ZMT4 941 aa16.72■□□□□ 0.27
RNF40-205ENST00000563909 SNRNP27Q8WVK2 155 aaKnown RBP16.72■□□□□ 0.27
RNF40-205ENST00000563909 RFFLQ8WZ73 363 aa16.72■□□□□ 0.27
RNF40-205ENST00000563909 P2RY11Q96G91 374 aa16.72■□□□□ 0.27
RNF40-205ENST00000563909 MRPL45Q9BRJ2 306 aaKnown RBP16.72■□□□□ 0.27
RNF40-205ENST00000563909 KLF16Q9BXK1 252 aaPredicted RBP16.72■□□□□ 0.27
RNF40-205ENST00000563909 B3GNT5Q9BYG0 378 aa16.72■□□□□ 0.27
RNF40-205ENST00000563909 LHX5Q9H2C1 402 aa16.72■□□□□ 0.27
RNF40-205ENST00000563909 PDE11AQ9HCR9 933 aa16.72■□□□□ 0.27
RNF40-205ENST00000563909 RMND1Q9NWS8 449 aa16.72■□□□□ 0.27
RNF40-205ENST00000563909 NME7Q9Y5B8 376 aa16.72■□□□□ 0.27
RNF40-205ENST00000563909 NUMA1Q14980 2115 aa16.72■□□□□ 0.27
RNF40-205ENST00000563909 UTP20O75691 2785 aaKnown RBP16.72■□□□□ 0.27
RNF40-205ENST00000563909 GOLGA8IPA6NC78 632 aa16.71■□□□□ 0.27
RNF40-205ENST00000563909 GOLGA8JA6NMD2 632 aa16.71■□□□□ 0.27
RNF40-205ENST00000563909 TLR5O60602 858 aa16.71■□□□□ 0.27
RNF40-205ENST00000563909 RHOBTB3O94955 611 aa16.71■□□□□ 0.27
RNF40-205ENST00000563909 ZDHHC11BP0C7U3 371 aa16.71■□□□□ 0.27
RNF40-205ENST00000563909 GARTP22102 1010 aa16.71■□□□□ 0.27
RNF40-205ENST00000563909 PGFP49763 221 aa16.71■□□□□ 0.27
RNF40-205ENST00000563909 RACK1P63244 317 aaKnown RBP16.71■□□□□ 0.27
RNF40-205ENST00000563909 NFATC3Q12968 1075 aa16.71■□□□□ 0.27
RNF40-205ENST00000563909 L1TD1Q5T7N2 865 aaKnown RBP16.71■□□□□ 0.27
RNF40-205ENST00000563909 SERPINA13PQ6UXR4 307 aa16.71■□□□□ 0.27
RNF40-205ENST00000563909 OR6B3Q8NGW1 331 aa16.71■□□□□ 0.27
RNF40-205ENST00000563909 OR2T3Q8NH03 318 aa16.71■□□□□ 0.27
RNF40-205ENST00000563909 NOC3LQ8WTT2 800 aaKnown RBP16.71■□□□□ 0.27
RNF40-205ENST00000563909 SMARCE1Q969G3 411 aa16.71■□□□□ 0.27
RNF40-205ENST00000563909 GSDMAQ96QA5 445 aa16.71■□□□□ 0.27
RNF40-205ENST00000563909 ORAI3Q9BRQ5 295 aa16.71■□□□□ 0.27
RNF40-205ENST00000563909 BTBD1Q9H0C5 482 aa16.71■□□□□ 0.27
RNF40-205ENST00000563909 DPEP3Q9H4B8 488 aa16.71■□□□□ 0.27
RNF40-205ENST00000563909 ELOVL2Q9NXB9 296 aa16.71■□□□□ 0.27
RNF40-205ENST00000563909 PCDHB1Q9Y5F3 818 aa16.71■□□□□ 0.27
RNF40-205ENST00000563909 DOPEY2Q9Y3R5 2298 aa16.71■□□□□ 0.27
RNF40-205ENST00000563909 TEP1Q99973 2627 aaKnown RBP16.7■□□□□ 0.26
RNF40-205ENST00000563909 EIF3DO15371 548 aaKnown RBP eCLIP16.7■□□□□ 0.26
RNF40-205ENST00000563909 MPOP05164 745 aa16.7■□□□□ 0.26
RNF40-205ENST00000563909 CKMT2P17540 419 aa16.7■□□□□ 0.26
RNF40-205ENST00000563909 GOLGA8FQ08AF8 430 aa16.7■□□□□ 0.26
RNF40-205ENST00000563909 GOLGA8DPQ0D2H9 430 aa16.7■□□□□ 0.26
RNF40-205ENST00000563909 E2F5Q15329 346 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms