RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 CST3P01034 146 aaPredicted RBP8.13□□□□□ -1.11
HERPUD1-206ENST00000563343 HOXB1P14653 301 aaPredicted RBP8.13□□□□□ -1.11
HERPUD1-206ENST00000563343 CKMT2P17540 419 aa8.13□□□□□ -1.11
HERPUD1-206ENST00000563343 ITGB6P18564 788 aa8.13□□□□□ -1.11
HERPUD1-206ENST00000563343 ABCB4P21439 1286 aa8.13□□□□□ -1.11
HERPUD1-206ENST00000563343 GARTP22102 1010 aa8.13□□□□□ -1.11
HERPUD1-206ENST00000563343 BCAT1P54687 386 aa8.13□□□□□ -1.11
HERPUD1-206ENST00000563343 C21orf59P57076 290 aa8.13□□□□□ -1.11
HERPUD1-206ENST00000563343 GRIN1Q05586 938 aa8.13□□□□□ -1.11
HERPUD1-206ENST00000563343 NFATC3Q12968 1075 aa8.13□□□□□ -1.11
HERPUD1-206ENST00000563343 KCNJ12Q14500 433 aa8.13□□□□□ -1.11
HERPUD1-206ENST00000563343 DHX8Q14562 1220 aaKnown RBP8.13□□□□□ -1.11
HERPUD1-206ENST00000563343 MCM6Q14566 821 aa8.13□□□□□ -1.11
HERPUD1-206ENST00000563343 LINC00303Q3SY05 128 aa8.13□□□□□ -1.11
HERPUD1-206ENST00000563343 KIAA0895LQ68EN5 471 aa8.13□□□□□ -1.11
HERPUD1-206ENST00000563343 IGF2-ASQ6U949 168 aa8.13□□□□□ -1.11
HERPUD1-206ENST00000563343 ZNF574Q6ZN55 896 aaPredicted RBP8.13□□□□□ -1.11
HERPUD1-206ENST00000563343 DYMQ7RTS9 669 aa8.13□□□□□ -1.11
HERPUD1-206ENST00000563343 ANKS1BQ7Z6G8 1248 aa8.13□□□□□ -1.11
HERPUD1-206ENST00000563343 ADAT2Q7Z6V5 191 aaKnown RBP8.13□□□□□ -1.11
HERPUD1-206ENST00000563343 SFR1Q86XK3 245 aa8.13□□□□□ -1.11
HERPUD1-206ENST00000563343 B3GALNT2Q8NCR0 500 aa8.13□□□□□ -1.11
HERPUD1-206ENST00000563343 OR6B3Q8NGW1 331 aa8.13□□□□□ -1.11
HERPUD1-206ENST00000563343 UCMAQ8WVF2 138 aa8.13□□□□□ -1.11
HERPUD1-206ENST00000563343 MMS19Q96T76 1030 aa8.13□□□□□ -1.11
HERPUD1-206ENST00000563343 CBWD1Q9BRT8 395 aa8.13□□□□□ -1.11
HERPUD1-206ENST00000563343 ZHX3Q9H4I2 956 aa8.13□□□□□ -1.11
HERPUD1-206ENST00000563343 NMUR1Q9HB89 426 aa8.13□□□□□ -1.11
HERPUD1-206ENST00000563343 SGK2Q9HBY8 427 aa8.13□□□□□ -1.11
HERPUD1-206ENST00000563343 CSNK1G1Q9HCP0 422 aa8.13□□□□□ -1.11
HERPUD1-206ENST00000563343 STARD5Q9NSY2 213 aa8.13□□□□□ -1.11
HERPUD1-206ENST00000563343 LSM7Q9UK45 103 aaKnown RBP8.13□□□□□ -1.11
HERPUD1-206ENST00000563343 CLEC18AA5D8T8 446 aa8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 VWA3AA6NCI4 1184 aa8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 SLC26A4O43511 780 aa8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 LZTS3O60299 673 aaPredicted RBP8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 DDIT3P35638 169 aa8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 ATP5C1P36542 298 aaKnown RBP8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 LSSP48449 732 aa8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 CASP5P51878 434 aa8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 GALCP54803 685 aa8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 NXPH1P58417 271 aa8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 ANAPC15P60006 121 aa8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 GABREP78334 506 aa8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 NFKB2Q00653 900 aa8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 ZBTB16Q05516 673 aa8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 L1TD1Q5T7N2 865 aaKnown RBP8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 KLHDC10Q6PID8 442 aa8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 CLEC18BQ6UXF7 455 aa8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 SERPINA13PQ6UXR4 307 aa8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 SPATS2Q86XZ4 545 aaKnown RBP8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 FUKQ8N0W3 1084 aa8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 LSMEM2Q8N112 164 aa8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 ZNF366Q8N895 744 aa8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 CLEC18CQ8NCF0 446 aa8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 PTCD2Q8WV60 388 aaKnown RBP8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 RAD54LQ92698 747 aa8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 ANKRD36BP1Q96IX9 119 aa8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 CDK5RAP3Q96JB5 506 aa8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 VCPIP1Q96JH7 1222 aa8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 SMOQ99835 787 aa8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 FGFBP2Q9BYJ0 223 aa8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 FAM117AQ9C073 453 aa8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 NACA2Q9H009 215 aa8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 ERVMER34-1Q9H9K5 563 aa8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 DMAP1Q9NPF5 467 aaPredicted RBP8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 PRSS16Q9NQE7 514 aa8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 SERGEFQ9UGK8 458 aa8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 RP1P56715 2156 aa8.12□□□□□ -1.11
HERPUD1-206ENST00000563343 ITPR2Q14571 2701 aa8.11□□□□□ -1.11
HERPUD1-206ENST00000563343 A8MXQ7 604 aa8.11□□□□□ -1.11
HERPUD1-206ENST00000563343 HHLA1C9JL84 531 aa8.11□□□□□ -1.11
HERPUD1-206ENST00000563343 TRIM38O00635 465 aa8.11□□□□□ -1.11
HERPUD1-206ENST00000563343 EFSO43281 561 aa8.11□□□□□ -1.11
HERPUD1-206ENST00000563343 TBCAO75347 108 aaKnown RBP8.11□□□□□ -1.11
HERPUD1-206ENST00000563343 AFPP02771 609 aaKnown RBP8.11□□□□□ -1.11
HERPUD1-206ENST00000563343 GIMD1P0DJR0 217 aa8.11□□□□□ -1.11
HERPUD1-206ENST00000563343 CD38P28907 300 aa8.11□□□□□ -1.11
HERPUD1-206ENST00000563343 PLA2G4AP47712 749 aa8.11□□□□□ -1.11
HERPUD1-206ENST00000563343 E2F1Q01094 437 aa8.11□□□□□ -1.11
HERPUD1-206ENST00000563343 UBAP2LQ14157 1087 aaKnown RBP8.11□□□□□ -1.11
HERPUD1-206ENST00000563343 E2F5Q15329 346 aa8.11□□□□□ -1.11
HERPUD1-206ENST00000563343 DUOXA2Q1HG44 320 aa8.11□□□□□ -1.11
HERPUD1-206ENST00000563343 ARL6IP4Q66PJ3 421 aaKnown RBP8.11□□□□□ -1.11
HERPUD1-206ENST00000563343 ATG14Q6ZNE5 492 aa8.11□□□□□ -1.11
HERPUD1-206ENST00000563343 USP30Q70CQ3 517 aa8.11□□□□□ -1.11
HERPUD1-206ENST00000563343 GPRIN1Q7Z2K8 1008 aa8.11□□□□□ -1.11
HERPUD1-206ENST00000563343 TRAPPC11Q7Z392 1133 aa8.11□□□□□ -1.11
HERPUD1-206ENST00000563343 FAM217AQ8IXS0 508 aa8.11□□□□□ -1.11
HERPUD1-206ENST00000563343 ZC3H3Q8IXZ2 948 aaKnown RBP8.11□□□□□ -1.11
HERPUD1-206ENST00000563343 GPD1LQ8N335 351 aa8.11□□□□□ -1.11
HERPUD1-206ENST00000563343 SMARCD1Q96GM5 515 aa8.11□□□□□ -1.11
HERPUD1-206ENST00000563343 MYO19Q96H55 970 aa8.11□□□□□ -1.11
HERPUD1-206ENST00000563343 PRR11Q96HE9 360 aaPredicted RBP8.11□□□□□ -1.11
HERPUD1-206ENST00000563343 CIPCQ9C0C6 399 aa8.11□□□□□ -1.11
HERPUD1-206ENST00000563343 SNX25Q9H3E2 840 aa8.11□□□□□ -1.11
HERPUD1-206ENST00000563343 PCIF1Q9H4Z3 704 aa8.11□□□□□ -1.11
HERPUD1-206ENST00000563343 POLR1BQ9H9Y6 1135 aa8.11□□□□□ -1.11
HERPUD1-206ENST00000563343 FBRSQ9HAH7 460 aa8.11□□□□□ -1.11
HERPUD1-206ENST00000563343 GDF3Q9NR23 364 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms