RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 CENPBP07199 599 aaPredicted RBP3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 CELA2AP08217 269 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 ITGA2BP08514 1039 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 APEHP13798 732 aaKnown RBP3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 DRD1P21728 446 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 MMP8P22894 467 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 TXNL4AP83876 142 aaKnown RBP3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 HOXA4Q00056 320 aaPredicted RBP3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 CFHR3Q02985 330 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 GRM4Q14833 912 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 FCRLBQ6BAA4 426 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 CCDC144NLQ6NUI1 221 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 NAPRTQ6XQN6 538 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 TRIM72Q6ZMU5 477 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 MAATS1Q7Z4T9 603 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 ANKRD18AQ8IVF6 992 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 C12orf76Q8N812 135 aaPredicted RBP3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 TERB1Q8NA31 727 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 OR1N1Q8NGS0 311 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 WDR60Q8WVS4 1066 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 DAZAP1Q96EP5 407 aaKnown RBP3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 KAZALD1Q96I82 304 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 ZSCAN31Q96LW9 406 aaPredicted RBP3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 MMS19Q96T76 1030 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 MACROD1Q9BQ69 325 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 ISCA1Q9BUE6 129 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 CINPQ9BW66 212 aaPredicted RBP3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 TMEM120AQ9BXJ8 343 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 CIPCQ9C0C6 399 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 ZHX3Q9H4I2 956 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 SAP30LQ9HAJ7 183 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 ASIC5Q9NY37 505 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 MAP3K20Q9NYL2 800 aaKnown RBP3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 TFCP2L1Q9NZI6 479 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 SEMA5BQ9P283 1151 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 IFT80Q9P2H3 777 aaPredicted RBP3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 SERGEFQ9UGK8 458 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 FZD4Q9ULV1 537 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 NFU1Q9UMS0 254 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 WNT6Q9Y6F9 365 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 SETD1BQ9UPS6 1966 aaKnown RBP3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 BTBD19C9JJ37 291 aa3.71□□□□□ -1.82
SHCBP1-202ENST00000563219 NCAM2O15394 837 aa3.71□□□□□ -1.82
SHCBP1-202ENST00000563219 CA12O43570 354 aa3.71□□□□□ -1.82
SHCBP1-202ENST00000563219 MT-CO3P00414 261 aa3.71□□□□□ -1.82
SHCBP1-202ENST00000563219 MBPP02686 304 aaPredicted RBP3.71□□□□□ -1.82
SHCBP1-202ENST00000563219 TMIGD3P0DMS9 266 aaPredicted RBP3.71□□□□□ -1.82
SHCBP1-202ENST00000563219 HSD3B1P14060 373 aa3.71□□□□□ -1.82
SHCBP1-202ENST00000563219 KLRK1P26718 216 aa3.71□□□□□ -1.82
SHCBP1-202ENST00000563219 AKT1P31749 480 aa3.71□□□□□ -1.82
SHCBP1-202ENST00000563219 GSTM5P46439 218 aa3.71□□□□□ -1.82
SHCBP1-202ENST00000563219 CDK7P50613 346 aa3.71□□□□□ -1.82
SHCBP1-202ENST00000563219 ZNF81P51508 661 aa3.71□□□□□ -1.82
SHCBP1-202ENST00000563219 PNLIPRP1P54315 467 aa3.71□□□□□ -1.82
SHCBP1-202ENST00000563219 GEMIN4P57678 1058 aaKnown RBP3.71□□□□□ -1.82
SHCBP1-202ENST00000563219 GPC5P78333 572 aa3.71□□□□□ -1.82
SHCBP1-202ENST00000563219 FOXD4Q12950 439 aaPredicted RBP3.71□□□□□ -1.82
SHCBP1-202ENST00000563219 SEMA3BQ13214 749 aa3.71□□□□□ -1.82
SHCBP1-202ENST00000563219 FAM187BQ17R55 369 aa3.71□□□□□ -1.82
SHCBP1-202ENST00000563219 RINT1Q6NUQ1 792 aa3.71□□□□□ -1.82
SHCBP1-202ENST00000563219 RRAGAQ7L523 313 aa3.71□□□□□ -1.82
SHCBP1-202ENST00000563219 AMIGO2Q86SJ2 522 aa3.71□□□□□ -1.82
SHCBP1-202ENST00000563219 TRABD2AQ86V40 505 aa3.71□□□□□ -1.82
SHCBP1-202ENST00000563219 HEATR4Q86WZ0 1026 aa3.71□□□□□ -1.82
SHCBP1-202ENST00000563219 SLC44A2Q8IWA5 706 aaPredicted RBP3.71□□□□□ -1.82
SHCBP1-202ENST00000563219 GALNT15Q8N3T1 639 aa3.71□□□□□ -1.82
SHCBP1-202ENST00000563219 OTUD7AQ8TE49 926 aaPredicted RBP3.71□□□□□ -1.82
SHCBP1-202ENST00000563219 MPP4Q96JB8 637 aa3.71□□□□□ -1.82
SHCBP1-202ENST00000563219 ZNF778Q96MU6 729 aa3.71□□□□□ -1.82
SHCBP1-202ENST00000563219 RTKNQ9BST9 563 aa3.71□□□□□ -1.82
SHCBP1-202ENST00000563219 PRDM8Q9NQV8 689 aa3.71□□□□□ -1.82
SHCBP1-202ENST00000563219 SMC4Q9NTJ3 1288 aa3.71□□□□□ -1.82
SHCBP1-202ENST00000563219 GGA3Q9NZ52 723 aa3.71□□□□□ -1.82
SHCBP1-202ENST00000563219 CRYL1Q9Y2S2 319 aa3.71□□□□□ -1.82
SHCBP1-202ENST00000563219 SPATA31A1Q5TZJ5 1347 aa3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 TCRBV5S1A1TA0A578 114 aa3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 FAM90A18PA6NE21 464 aa3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 FAM90A16PA6NEW6 464 aa3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 FAM90A9PA6NNJ1 464 aa3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 FAM90A5PA8MXJ8 464 aa3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 HMGB1P1B2RPK0 211 aaPredicted RBP3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 M0QZQ0 153 aa3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 IRAK2O43187 625 aa3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 EPB41L2O43491 1005 aaKnown RBP3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 PRAMEF2O60811 474 aa3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 ACTL6BO94805 426 aa3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 FAM90A15PP0C7V4 464 aa3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 FAM90A14PP0C7W9 464 aa3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 CKMT1AP12532 417 aa3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 ATF7P17544 494 aaPredicted RBP3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 MATN1P21941 496 aa3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 PRKAA2P54646 552 aa3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 CCDC15Q0P6D6 951 aa3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 G3BP1Q13283 466 aaKnown RBP eCLIP3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 SIM2Q14190 667 aaPredicted RBP3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 LARS2Q15031 903 aaKnown RBP3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 ANKRD45Q5TZF3 282 aa3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 SUMO4Q6EEV6 95 aa3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 ZNF425Q6IV72 752 aa3.7□□□□□ -1.82
SHCBP1-202ENST00000563219 ACSM6Q6P461 480 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms