RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 ADH1CP00326 375 aa13.95□□□□□ -0.18
CDH1-204ENST00000562118 F9P00740 461 aa13.95□□□□□ -0.18
CDH1-204ENST00000562118 SLC2A3P11169 496 aa13.95□□□□□ -0.18
CDH1-204ENST00000562118 ADH5P11766 374 aa13.95□□□□□ -0.18
CDH1-204ENST00000562118 KRT3P12035 628 aa13.95□□□□□ -0.18
CDH1-204ENST00000562118 AOC1P19801 751 aa13.95□□□□□ -0.18
CDH1-204ENST00000562118 RFC1P35251 1148 aaPredicted RBP13.95□□□□□ -0.18
CDH1-204ENST00000562118 RPS9P46781 194 aaKnown RBP13.95□□□□□ -0.18
CDH1-204ENST00000562118 SOX9P48436 509 aa13.95□□□□□ -0.18
CDH1-204ENST00000562118 ZNF143P52747 638 aaPredicted RBP13.95□□□□□ -0.18
CDH1-204ENST00000562118 MPP7Q5T2T1 576 aa13.95□□□□□ -0.18
CDH1-204ENST00000562118 DNAJC24Q6P3W2 148 aa13.95□□□□□ -0.18
CDH1-204ENST00000562118 ALKBH5Q6P6C2 394 aaKnown RBP13.95□□□□□ -0.18
CDH1-204ENST00000562118 ZNF852Q6ZMS4 543 aa13.95□□□□□ -0.18
CDH1-204ENST00000562118 TMEM25Q86YD3 366 aa13.95□□□□□ -0.18
CDH1-204ENST00000562118 TMEM139Q8IV31 216 aa13.95□□□□□ -0.18
CDH1-204ENST00000562118 DENND1CQ8IV53 801 aa13.95□□□□□ -0.18
CDH1-204ENST00000562118 SUGP1Q8IWZ8 645 aaKnown RBP13.95□□□□□ -0.18
CDH1-204ENST00000562118 FBXL6Q8N531 539 aa13.95□□□□□ -0.18
CDH1-204ENST00000562118 EMC1Q8N766 993 aa13.95□□□□□ -0.18
CDH1-204ENST00000562118 BTN2A3PQ96KV6 586 aa13.95□□□□□ -0.18
CDH1-204ENST00000562118 TBCBQ99426 244 aa13.95□□□□□ -0.18
CDH1-204ENST00000562118 NELL2Q99435 816 aa13.95□□□□□ -0.18
CDH1-204ENST00000562118 NHEJ1Q9H9Q4 299 aaPredicted RBP13.95□□□□□ -0.18
CDH1-204ENST00000562118 ANLNQ9NQW6 1124 aa13.95□□□□□ -0.18
CDH1-204ENST00000562118 SEPT11Q9NVA2 429 aaKnown RBP13.95□□□□□ -0.18
CDH1-204ENST00000562118 PARVAQ9NVD7 372 aa13.95□□□□□ -0.18
CDH1-204ENST00000562118 DDIT4Q9NX09 232 aa13.95□□□□□ -0.18
CDH1-204ENST00000562118 ANKRD62A6NC57 917 aa13.94□□□□□ -0.18
CDH1-204ENST00000562118 TMEM191CA6NGB0 347 aa13.94□□□□□ -0.18
CDH1-204ENST00000562118 GOLGA8SH3BPF8 625 aa13.94□□□□□ -0.18
CDH1-204ENST00000562118 M0QYT0 321 aa13.94□□□□□ -0.18
CDH1-204ENST00000562118 SCAMP3O14828 347 aaKnown RBP13.94□□□□□ -0.18
CDH1-204ENST00000562118 GJB6O95452 261 aa13.94□□□□□ -0.18
CDH1-204ENST00000562118 CYP1A2P05177 515 aa13.94□□□□□ -0.18
CDH1-204ENST00000562118 HMBSP08397 361 aa13.94□□□□□ -0.18
CDH1-204ENST00000562118 CHRNB1P11230 501 aa13.94□□□□□ -0.18
CDH1-204ENST00000562118 TARSP26639 723 aaKnown RBP13.94□□□□□ -0.18
CDH1-204ENST00000562118 SLC6A4P31645 630 aa13.94□□□□□ -0.18
CDH1-204ENST00000562118 CCR1P32246 355 aa13.94□□□□□ -0.18
CDH1-204ENST00000562118 GBP1P32455 592 aa13.94□□□□□ -0.18
CDH1-204ENST00000562118 MAGEA9P43362 315 aa13.94□□□□□ -0.18
CDH1-204ENST00000562118 HDAC4P56524 1084 aa13.94□□□□□ -0.18
CDH1-204ENST00000562118 RPL7AP62424 266 aaKnown RBP13.94□□□□□ -0.18
CDH1-204ENST00000562118 AMPD2Q01433 879 aa13.94□□□□□ -0.18
CDH1-204ENST00000562118 OGDHQ02218 1023 aa13.94□□□□□ -0.18
CDH1-204ENST00000562118 NRG1Q02297 640 aaPredicted RBP13.94□□□□□ -0.18
CDH1-204ENST00000562118 GAD2Q05329 585 aa13.94□□□□□ -0.18
CDH1-204ENST00000562118 ZNF252P-AS1Q0IIN9 211 aa13.94□□□□□ -0.18
CDH1-204ENST00000562118 NR1H3Q13133 447 aa13.94□□□□□ -0.18
CDH1-204ENST00000562118 ZC3H12AQ5D1E8 599 aaKnown RBP13.94□□□□□ -0.18
CDH1-204ENST00000562118 ACBD5Q5T8D3 534 aaPredicted RBP13.94□□□□□ -0.18
CDH1-204ENST00000562118 MAMSTRQ6ZN01 415 aa13.94□□□□□ -0.18
CDH1-204ENST00000562118 C12orf40Q86WS4 652 aa13.94□□□□□ -0.18
CDH1-204ENST00000562118 DNAAF5Q86Y56 855 aa13.94□□□□□ -0.18
CDH1-204ENST00000562118 ZNF683Q8IZ20 524 aa13.94□□□□□ -0.18
CDH1-204ENST00000562118 RXFP2Q8WXD0 754 aa13.94□□□□□ -0.18
CDH1-204ENST00000562118 FAM3CQ92520 227 aa13.94□□□□□ -0.18
CDH1-204ENST00000562118 EZH1Q92800 747 aaPredicted RBP13.94□□□□□ -0.18
CDH1-204ENST00000562118 CFAP57Q96MR6 1250 aa13.94□□□□□ -0.18
CDH1-204ENST00000562118 PRICKLE1Q96MT3 831 aaPredicted RBP13.94□□□□□ -0.18
CDH1-204ENST00000562118 SELENOOQ9BVL4 669 aa13.94□□□□□ -0.18
CDH1-204ENST00000562118 FAM204AQ9H8W3 233 aa13.94□□□□□ -0.18
CDH1-204ENST00000562118 ZNHIT6Q9NWK9 470 aaKnown RBP13.94□□□□□ -0.18
CDH1-204ENST00000562118 CISD3P0C7P0 127 aa13.93□□□□□ -0.18
CDH1-204ENST00000562118 PDGFRAP16234 1089 aa13.93□□□□□ -0.18
CDH1-204ENST00000562118 GPD1P21695 349 aa13.93□□□□□ -0.18
CDH1-204ENST00000562118 HOXD9P28356 352 aaPredicted RBP13.93□□□□□ -0.18
CDH1-204ENST00000562118 SDC4P31431 198 aa13.93□□□□□ -0.18
CDH1-204ENST00000562118 RDXP35241 583 aaKnown RBP13.93□□□□□ -0.18
CDH1-204ENST00000562118 SLC11A2P49281 568 aa13.93□□□□□ -0.18
CDH1-204ENST00000562118 SULT1E1P49888 294 aa13.93□□□□□ -0.18
CDH1-204ENST00000562118 NUBP1P53384 320 aa13.93□□□□□ -0.18
CDH1-204ENST00000562118 GFPT1Q06210 699 aaPredicted RBP13.93□□□□□ -0.18
CDH1-204ENST00000562118 SCAPQ12770 1279 aa13.93□□□□□ -0.18
CDH1-204ENST00000562118 TCEAL1Q15170 157 aa13.93□□□□□ -0.18
CDH1-204ENST00000562118 TMEM31Q5JXX7 168 aa13.93□□□□□ -0.18
CDH1-204ENST00000562118 PIK3R6Q5UE93 754 aa13.93□□□□□ -0.18
CDH1-204ENST00000562118 NAIF1Q69YI7 327 aaPredicted RBP13.93□□□□□ -0.18
CDH1-204ENST00000562118 ASTLQ6HA08 431 aaPredicted RBP13.93□□□□□ -0.18
CDH1-204ENST00000562118 FSTL4Q6MZW2 842 aa13.93□□□□□ -0.18
CDH1-204ENST00000562118 KIAA0907Q7Z7F0 614 aaPredicted RBP13.93□□□□□ -0.18
CDH1-204ENST00000562118 NTAN1Q96AB6 310 aa13.93□□□□□ -0.18
CDH1-204ENST00000562118 LMLNQ96KR4 655 aa13.93□□□□□ -0.18
CDH1-204ENST00000562118 C1orf74Q96LT6 269 aa13.93□□□□□ -0.18
CDH1-204ENST00000562118 CNPY3Q9BT09 278 aa13.93□□□□□ -0.18
CDH1-204ENST00000562118 IER2Q9BTL4 223 aa13.93□□□□□ -0.18
CDH1-204ENST00000562118 FOXQ1Q9C009 403 aa13.93□□□□□ -0.18
CDH1-204ENST00000562118 THAP2Q9H0W7 228 aa13.93□□□□□ -0.18
CDH1-204ENST00000562118 FBRSL1Q9HCM7 1045 aaKnown RBP13.93□□□□□ -0.18
CDH1-204ENST00000562118 CNOT8Q9UFF9 292 aaKnown RBP13.93□□□□□ -0.18
CDH1-204ENST00000562118 XPO7Q9UIA9 1087 aaKnown RBP13.93□□□□□ -0.18
CDH1-204ENST00000562118 SLC27A6Q9Y2P4 619 aa13.93□□□□□ -0.18
CDH1-204ENST00000562118 MRPS17Q9Y2R5 130 aaKnown RBP13.93□□□□□ -0.18
CDH1-204ENST00000562118 MTF2Q9Y483 593 aaPredicted RBP13.93□□□□□ -0.18
CDH1-204ENST00000562118 SCINQ9Y6U3 715 aa13.93□□□□□ -0.18
CDH1-204ENST00000562118 DMDP11532 3685 aa13.93□□□□□ -0.18
CDH1-204ENST00000562118 IGLV3-10A0A075B6K4 115 aa13.92□□□□□ -0.18
CDH1-204ENST00000562118 FAM170AA1A519 330 aa13.92□□□□□ -0.18
CDH1-204ENST00000562118 TMCO5BA8MYB1 307 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms